DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and AT1G74360

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_565084.1 Gene:AT1G74360 / 843777 AraportID:AT1G74360 Length:1106 Species:Arabidopsis thaliana


Alignment Length:958 Identity:219/958 - (22%)
Similarity:334/958 - (34%) Gaps:285/958 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQL-- 173
            |.|:|||.. |||.|             ...:||  .:|..:.:.::.....|:.|:....::  
plant    43 EVLLSLKSY-LESRN-------------PQNRGL--YTEWKMENQDVVCQWPGIICTPQRSRVTG 91

  Fly   174 LNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELR-SLPDAWGASRLRRL 237
            :|||.:.|....|..|       |||          :||..||:|.|.:. .:||  ..||...|
plant    92 INLTDSTISGPLFKNF-------SAL----------TELTYLDLSRNTIEGEIPD--DLSRCHNL 137

  Fly   238 QTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLV-----SLPSEAFAGNKELRELHLQGNDLYE 297
            :.|:|.||.:.  ...:|.|||:|.||::|.|.:.     |.|  .|..:  |...:|..|:...
plant   138 KHLNLSHNILE--GELSLPGLSNLEVLDLSLNRITGDIQSSFP--LFCNS--LVVANLSTNNFTG 196

  Fly   298 LPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALT-RIGSKTFKELYFLQI 361
            ....:.:....|..:|.|.|:.:     ...:.|..||:..::::|.|: .|.:..|:....||:
plant   197 RIDDIFNGCRNLKYVDFSSNRFS-----GEVWTGFGRLVEFSVADNHLSGNISASMFRGNCTLQM 256

  Fly   362 LDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFR 426
            ||:..|:.|....|......||:.|||..|:        |.|           |:.:.:.|    
plant   257 LDLSGNAFGGEFPGQVSNCQNLNVLNLWGNK--------FTG-----------NIPAEIGS---- 298

  Fly   427 NCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNR-IG 489
             .|.||.|.|.:|..: ::||.:.:|:.|..|||..|:........|....|:..|.|..|. :|
plant   299 -ISSLKGLYLGNNTFSRDIPETLLNLTNLVFLDLSRNKFGGDIQEIFGRFTQVKYLVLHANSYVG 362

  Fly   490 NITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNL 554
            .|.......||.||.|:|..|....      ...|||..|:                 ||.:|.|
plant   363 GINSSNILKLPNLSRLDLGYNNFSG------QLPTEISQIQ-----------------SLKFLIL 404

  Fly   555 SENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNS-- 617
            :.|                 :..|:..:..||...||      .||.|.|::|.    |:|.|  
plant   405 AYN-----------------NFSGDIPQEYGNMPGLQ------ALDLSFNKLTG----SIPASFG 442

  Fly   618 -----IELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLG 677
                 :.|:..||::.|:|....                                          
plant   443 KLTSLLWLMLANNSLSGEIPREI------------------------------------------ 465

  Fly   678 GNPFECDCSMEWLQRINN-LTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHC 741
            ||   | .|:.|....|| |:.|.||.:..:|                              |:.
plant   466 GN---C-TSLLWFNVANNQLSGRFHPELTRMG------------------------------SNP 496

  Fly   742 PPTCHCCEYEQCECEVICPGNCSCFHDATWAT------NIVDCGRQDLAALPNRIPQDVSDLYLD 800
            .||   .|..:...:.|..|:..|.....|..      |.|      .|.|..:..:.:.|..|.
plant   497 SPT---FEVNRQNKDKIIAGSGECLAMKRWIPAEFPPFNFV------YAILTKKSCRSLWDHVLK 552

  Fly   801 GNNM-PELEVGHLTGRRNLRA-LYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSL 863
            |..: |....|.......:.| |.|:.:........|::|:..|..|||..|:   .||.....:
plant   553 GYGLFPVCSAGSTVRTLKISAYLQLSGNKFSGEIPASISQMDRLSTLHLGFNE---FEGKLPPEI 614

  Fly   864 GLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLP-HLQYRHSLQGLTLGRNAWS---- 923
            |.|                   ||..|.:.|  ||....:| .:.....||.|.|..|.:|    
plant   615 GQL-------------------PLAFLNLTR--NNFSGEIPQEIGNLKCLQNLDLSFNNFSGNFP 658

  Fly   924 CRCQQLRELAQF-VSDNAMV---VRDAHDIYCLDAGIKRELELIGN-LANGPDCSDLLDASASNI 983
            .....|.||::| :|.|..:   :.....:...|..     ..:|| |...|   ...:.|.:|.
plant   659 TSLNDLNELSKFNISYNPFISGAIPTTGQVATFDKD-----SFLGNPLLRFP---SFFNQSGNNT 715

  Fly   984 S--SSQDLAGGYRLPLL---AAVLVLIFLV------VVLIIVFVFRES 1020
            .  |:|.|....|..||   :..|.|.|:.      :||::|...||:
plant   716 RKISNQVLGNRPRTLLLIWISLALALAFIACLVVSGIVLMVVKASREA 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 2/3 (67%)
LRR_8 115..181 CDD:404697 15/67 (22%)
leucine-rich repeat 116..146 CDD:275380 8/29 (28%)
leucine-rich repeat 147..170 CDD:275380 3/22 (14%)
leucine-rich repeat 171..201 CDD:275380 9/31 (29%)
LRR 210..592 CDD:443914 99/390 (25%)
leucine-rich repeat 212..236 CDD:275380 9/24 (38%)
leucine-rich repeat 237..260 CDD:275380 8/22 (36%)
leucine-rich repeat 261..284 CDD:275380 8/27 (30%)
leucine-rich repeat 285..308 CDD:275380 3/22 (14%)
leucine-rich repeat 309..334 CDD:275380 5/24 (21%)
leucine-rich repeat 335..358 CDD:275380 5/23 (22%)
leucine-rich repeat 359..382 CDD:275380 7/22 (32%)
leucine-rich repeat 383..406 CDD:275380 7/22 (32%)
leucine-rich repeat 407..430 CDD:275380 2/22 (9%)
leucine-rich repeat 431..451 CDD:275380 7/20 (35%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 5/21 (24%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 2/21 (10%)
leucine-rich repeat 590..617 CDD:275380 9/26 (35%)
leucine-rich repeat 618..641 CDD:275380 5/22 (23%)
leucine-rich repeat 642..689 CDD:275380 4/46 (9%)
LRRCT 679..736 CDD:214507 11/57 (19%)
LRR <775..>920 CDD:443914 33/147 (22%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
leucine-rich repeat 797..817 CDD:275380 4/20 (20%)
leucine-rich repeat 818..841 CDD:275380 5/23 (22%)
leucine-rich repeat 842..865 CDD:275380 7/22 (32%)
leucine-rich repeat 866..889 CDD:275380 3/22 (14%)
leucine-rich repeat 890..911 CDD:275380 5/21 (24%)
TIR 1045..1183 CDD:214587
AT1G74360NP_565084.1 PLN00113 43..1085 CDD:215061 219/958 (23%)
leucine-rich repeat 113..136 CDD:275380 9/24 (38%)
leucine-rich repeat 137..158 CDD:275380 8/22 (36%)
leucine-rich repeat 159..183 CDD:275380 8/25 (32%)
leucine-rich repeat 184..207 CDD:275380 3/22 (14%)
leucine-rich repeat 208..253 CDD:275380 11/49 (22%)
leucine-rich repeat 254..277 CDD:275380 7/22 (32%)
leucine-rich repeat 278..301 CDD:275380 9/46 (20%)
leucine-rich repeat 302..325 CDD:275380 8/22 (36%)
leucine-rich repeat 326..374 CDD:275380 13/47 (28%)
leucine-rich repeat 375..398 CDD:275380 9/45 (20%)
leucine-rich repeat 399..422 CDD:275380 7/39 (18%)
leucine-rich repeat 423..446 CDD:275380 10/32 (31%)
leucine-rich repeat 447..468 CDD:275380 7/65 (11%)
leucine-rich repeat 546..595 CDD:275380 10/48 (21%)
leucine-rich repeat 596..617 CDD:275380 8/23 (35%)
leucine-rich repeat 619..642 CDD:275380 6/24 (25%)
leucine-rich repeat 643..666 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.