DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and RLP14

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_177558.4 Gene:RLP14 / 843758 AraportID:AT1G74180 Length:976 Species:Arabidopsis thaliana


Alignment Length:940 Identity:228/940 - (24%)
Similarity:366/940 - (38%) Gaps:234/940 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQS-------FQGLK---- 145
            |.:||...|.:::    ..:.|:.||:..: |..|.||....|......       ::|||    
plant    18 LVQLRGYKCCIEK----ERKALLELKKYMI-SKTADWGLDSVLPTWTNDTKSNCCRWEGLKCNQT 77

  Fly   146 --ELSELHLGDNNIRQ---LPEGVWCSMPSLQLLNL-------------------TQNRIRSAEF 186
              .:.||.:|..|.::   |...:......|:.|||                   :..|:|:.|.
plant    78 SGRIIELSIGQTNFKESSLLNLSLLHPFEELRSLNLSGEIYNEFNGLFDDVEGYESLRRLRNLEI 142

  Fly   187 LGFSEKLCAGSALSNANGAVS-----------GG----------SELQTLDVS---FNELRSLPD 227
            |..|......|.....|.|.|           ||          ::|:.||:|   :|  .|:|:
plant   143 LDLSSNSFNNSIFPFLNAATSLTTLFIQSNYIGGPLPIKELKNLTKLELLDLSRSGYN--GSIPE 205

  Fly   228 AWGASRLRRLQTLSLQHNNISTLAP-NALAGLSSLRVLNISYNHLVS-LPSEAFAGNKELRELHL 290
               .:.|.:|:.|.|..|:.|:|.. ..|..|::|.||.:::|||.. :|.|.|...|.||:|.|
plant   206 ---FTHLEKLKALDLSANDFSSLVELQELKVLTNLEVLGLAWNHLDGPIPKEVFCEMKNLRQLDL 267

  Fly   291 QGNDLY---ELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNN--------- 343
            :||  |   :||. .|..|.:|.|||||.|||:.:.  .::|..|..|..|:||:|         
plant   268 RGN--YFEGQLPV-CLGNLNKLRVLDLSSNQLSGNL--PASFNSLESLEYLSLSDNNFEGFFSLN 327

  Fly   344 ---ALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLY 405
               .||::  |.|:.....::|.:..       |..:||.:.|....|....|    .:|.|.|.
plant   328 PLANLTKL--KVFRLSSTSEMLQVET-------ESNWLPKFQLTVAALPFCSL----GKIPNFLV 379

  Fly   406 VLTKLTL----NNNLVSIVESQAFRNCSDLKELDLSSNQLT--EVPEAVQDLSMLKTLDLGENQI 464
            ..|.|.|    :|.|...:.:....|..:||.|.|.:|..|  ::|..|..|           |:
plant   380 YQTNLRLVDLSSNRLSGDIPTWLLENNPELKVLQLKNNSFTIFQIPTIVHKL-----------QV 433

  Fly   465 SEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAI 529
            .:|      :.|.:||: |.|| ||::       ||||..:|.:.|..|.....:..:..:|..:
plant   434 LDF------SANDITGV-LPDN-IGHV-------LPRLLHMNGSHNGFQGNLPSSMGEMNDISFL 483

  Fly   530 RLDKNFLTD------INGIFATLASLLWLNLSENHLVWFDYAFIP-----SNLKWLDIHGN-YIE 582
            .|..|..:.      :.|.|    ||:.|.||.|.   |....:|     ::|..|.:|.| :..
plant   484 DLSYNNFSGELPRSLLTGCF----SLITLQLSHNS---FSGPILPIQTRLTSLIVLRMHNNLFTG 541

  Fly   583 ALGNYYKLQEEIRVTTLDASHNRITEIGAMSVP---NSIELLFINNNIIGQIQANTFVDKTRLAR 644
            .:|  ..|:..:.::..|||:||:|.:.:.|:|   :.:.:|.::||::......:.:....|..
plant   542 EIG--VGLRTLVNLSIFDASNNRLTGLISSSIPPDSSHLIMLLLSNNLLEGTLPPSLLAIHHLNF 604

  Fly   645 VDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRI------NNLTTRQHPH 703
            :||..|:||    ..|..:.|::...: :.:|..|.|.....:..|:..      ||..:...|.
plant   605 LDLSGNLLS----GDLPSSVVNSMYGI-KIFLHNNSFTGPLPVTLLENAYILDLRNNKLSGSIPQ 664

  Fly   704 VVDLGNIECLMPHSR----SAP-----LRPLASLSASDFVCKYESHCPPTCHCCEYEQCE----- 754
            .|:.|.:..|:....    |.|     |..:..|..||  .|.....||   |..:...|     
plant   665 FVNTGKMITLLLRGNNLTGSIPRKLCDLTSIRLLDLSD--NKLNGVIPP---CLNHLSTELGEGI 724

  Fly   755 -----CEVICPGNC--SCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNM-PELEVGH 811
                 .:.|..|:.  ..|:.:|:..                   |...||.|...| .|:|   
plant   725 GLSGFSQEISFGDSLQMEFYRSTFLV-------------------DEFMLYYDSTYMIVEIE--- 767

  Fly   812 LTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNML 876
                      :.......:...|:|..:..   |.|.:|:|:.:...|...|..||.|.|..|:|
plant   768 ----------FAAKQRYDSFSGGTLDYMYG---LDLSSNELSGVIPAELGDLSKLRALNLSRNLL 819

  Fly   877 THISNATFEPLVSLEVLRLDNNRL-SSLPH 905
            :....|.|..|..:|.|.|..|.| .::||
plant   820 SSSIPANFSKLKDIESLDLSYNMLQGNIPH 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 5/22 (23%)
LRR_8 115..181 CDD:404697 19/100 (19%)
leucine-rich repeat 116..146 CDD:275380 10/42 (24%)
leucine-rich repeat 147..170 CDD:275380 5/25 (20%)
leucine-rich repeat 171..201 CDD:275380 10/48 (21%)
LRR 210..592 CDD:443914 118/419 (28%)
leucine-rich repeat 212..236 CDD:275380 8/26 (31%)
leucine-rich repeat 237..260 CDD:275380 8/23 (35%)
leucine-rich repeat 261..284 CDD:275380 9/23 (39%)
leucine-rich repeat 285..308 CDD:275380 11/25 (44%)
leucine-rich repeat 309..334 CDD:275380 11/24 (46%)
leucine-rich repeat 335..358 CDD:275380 9/34 (26%)
leucine-rich repeat 359..382 CDD:275380 4/22 (18%)
leucine-rich repeat 383..406 CDD:275380 6/22 (27%)
leucine-rich repeat 407..430 CDD:275380 6/26 (23%)
leucine-rich repeat 431..451 CDD:275380 8/21 (38%)
leucine-rich repeat 454..477 CDD:275380 2/22 (9%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 5/27 (19%)
leucine-rich repeat 590..617 CDD:275380 9/29 (31%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 11/46 (24%)
LRRCT 679..736 CDD:214507 15/71 (21%)
LRR <775..>920 CDD:443914 31/133 (23%)
leucine-rich repeat 775..796 CDD:275380 1/20 (5%)
leucine-rich repeat 797..817 CDD:275380 6/20 (30%)
leucine-rich repeat 818..841 CDD:275380 2/22 (9%)
leucine-rich repeat 842..865 CDD:275380 6/22 (27%)
leucine-rich repeat 866..889 CDD:275380 9/22 (41%)
leucine-rich repeat 890..911 CDD:275380 7/17 (41%)
TIR 1045..1183 CDD:214587
RLP14NP_177558.4 LRRNT_2 31..75 CDD:462411 11/44 (25%)
PLN00113 <107..>322 CDD:215061 68/224 (30%)
leucine-rich repeat 108..139 CDD:275380 5/30 (17%)
leucine-rich repeat 140..163 CDD:275380 6/22 (27%)
leucine-rich repeat 164..188 CDD:275380 2/23 (9%)
leucine-rich repeat 189..211 CDD:275380 8/26 (31%)
leucine-rich repeat 212..236 CDD:275380 8/23 (35%)
leucine-rich repeat 237..261 CDD:275380 9/23 (39%)
leucine-rich repeat 262..285 CDD:275380 11/25 (44%)
PLN00113 265..>893 CDD:215061 165/683 (24%)
leucine-rich repeat 286..309 CDD:275380 11/24 (46%)
leucine-rich repeat 310..334 CDD:275380 6/23 (26%)
leucine-rich repeat 335..383 CDD:275380 12/60 (20%)
leucine-rich repeat 384..402 CDD:275380 4/17 (24%)
leucine-rich repeat 409..430 CDD:275380 8/20 (40%)
leucine-rich repeat 431..455 CDD:275380 12/49 (24%)
leucine-rich repeat 456..479 CDD:275380 4/22 (18%)
leucine-rich repeat 483..504 CDD:275380 4/24 (17%)
leucine-rich repeat 505..528 CDD:275380 7/25 (28%)
leucine-rich repeat 529..552 CDD:275380 6/24 (25%)
leucine-rich repeat 553..577 CDD:275380 8/23 (35%)
leucine-rich repeat 578..601 CDD:275380 3/22 (14%)
leucine-rich repeat 602..627 CDD:275380 8/28 (29%)
leucine-rich repeat 648..670 CDD:275380 4/21 (19%)
leucine-rich repeat 671..694 CDD:275380 4/22 (18%)
leucine-rich repeat 695..716 CDD:275380 7/25 (28%)
leucine-rich repeat 739..808 CDD:275380 17/103 (17%)
leucine-rich repeat 809..832 CDD:275380 9/22 (41%)
leucine-rich repeat 833..856 CDD:275380 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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