DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and RLP14

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_177558.4 Gene:RLP14 / 843758 AraportID:AT1G74180 Length:976 Species:Arabidopsis thaliana


Alignment Length:940 Identity:228/940 - (24%)
Similarity:366/940 - (38%) Gaps:234/940 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQS-------FQGLK---- 145
            |.:||...|.:::    ..:.|:.||:..: |..|.||....|......       ::|||    
plant    18 LVQLRGYKCCIEK----ERKALLELKKYMI-SKTADWGLDSVLPTWTNDTKSNCCRWEGLKCNQT 77

  Fly   146 --ELSELHLGDNNIRQ---LPEGVWCSMPSLQLLNL-------------------TQNRIRSAEF 186
              .:.||.:|..|.::   |...:......|:.|||                   :..|:|:.|.
plant    78 SGRIIELSIGQTNFKESSLLNLSLLHPFEELRSLNLSGEIYNEFNGLFDDVEGYESLRRLRNLEI 142

  Fly   187 LGFSEKLCAGSALSNANGAVS-----------GG----------SELQTLDVS---FNELRSLPD 227
            |..|......|.....|.|.|           ||          ::|:.||:|   :|  .|:|:
plant   143 LDLSSNSFNNSIFPFLNAATSLTTLFIQSNYIGGPLPIKELKNLTKLELLDLSRSGYN--GSIPE 205

  Fly   228 AWGASRLRRLQTLSLQHNNISTLAP-NALAGLSSLRVLNISYNHLVS-LPSEAFAGNKELRELHL 290
               .:.|.:|:.|.|..|:.|:|.. ..|..|::|.||.:::|||.. :|.|.|...|.||:|.|
plant   206 ---FTHLEKLKALDLSANDFSSLVELQELKVLTNLEVLGLAWNHLDGPIPKEVFCEMKNLRQLDL 267

  Fly   291 QGNDLY---ELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNN--------- 343
            :||  |   :||. .|..|.:|.|||||.|||:.:.  .::|..|..|..|:||:|         
plant   268 RGN--YFEGQLPV-CLGNLNKLRVLDLSSNQLSGNL--PASFNSLESLEYLSLSDNNFEGFFSLN 327

  Fly   344 ---ALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLY 405
               .||::  |.|:.....::|.:..       |..:||.:.|....|....|    .:|.|.|.
plant   328 PLANLTKL--KVFRLSSTSEMLQVET-------ESNWLPKFQLTVAALPFCSL----GKIPNFLV 379

  Fly   406 VLTKLTL----NNNLVSIVESQAFRNCSDLKELDLSSNQLT--EVPEAVQDLSMLKTLDLGENQI 464
            ..|.|.|    :|.|...:.:....|..:||.|.|.:|..|  ::|..|..|           |:
plant   380 YQTNLRLVDLSSNRLSGDIPTWLLENNPELKVLQLKNNSFTIFQIPTIVHKL-----------QV 433

  Fly   465 SEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAI 529
            .:|      :.|.:||: |.|| ||::       ||||..:|.:.|..|.....:..:..:|..:
plant   434 LDF------SANDITGV-LPDN-IGHV-------LPRLLHMNGSHNGFQGNLPSSMGEMNDISFL 483

  Fly   530 RLDKNFLTD------INGIFATLASLLWLNLSENHLVWFDYAFIP-----SNLKWLDIHGN-YIE 582
            .|..|..:.      :.|.|    ||:.|.||.|.   |....:|     ::|..|.:|.| :..
plant   484 DLSYNNFSGELPRSLLTGCF----SLITLQLSHNS---FSGPILPIQTRLTSLIVLRMHNNLFTG 541

  Fly   583 ALGNYYKLQEEIRVTTLDASHNRITEIGAMSVP---NSIELLFINNNIIGQIQANTFVDKTRLAR 644
            .:|  ..|:..:.::..|||:||:|.:.:.|:|   :.:.:|.::||::......:.:....|..
plant   542 EIG--VGLRTLVNLSIFDASNNRLTGLISSSIPPDSSHLIMLLLSNNLLEGTLPPSLLAIHHLNF 604

  Fly   645 VDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRI------NNLTTRQHPH 703
            :||..|:||    ..|..:.|::...: :.:|..|.|.....:..|:..      ||..:...|.
plant   605 LDLSGNLLS----GDLPSSVVNSMYGI-KIFLHNNSFTGPLPVTLLENAYILDLRNNKLSGSIPQ 664

  Fly   704 VVDLGNIECLMPHSR----SAP-----LRPLASLSASDFVCKYESHCPPTCHCCEYEQCE----- 754
            .|:.|.:..|:....    |.|     |..:..|..||  .|.....||   |..:...|     
plant   665 FVNTGKMITLLLRGNNLTGSIPRKLCDLTSIRLLDLSD--NKLNGVIPP---CLNHLSTELGEGI 724

  Fly   755 -----CEVICPGNC--SCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNM-PELEVGH 811
                 .:.|..|:.  ..|:.:|:..                   |...||.|...| .|:|   
plant   725 GLSGFSQEISFGDSLQMEFYRSTFLV-------------------DEFMLYYDSTYMIVEIE--- 767

  Fly   812 LTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNML 876
                      :.......:...|:|..:..   |.|.:|:|:.:...|...|..||.|.|..|:|
plant   768 ----------FAAKQRYDSFSGGTLDYMYG---LDLSSNELSGVIPAELGDLSKLRALNLSRNLL 819

  Fly   877 THISNATFEPLVSLEVLRLDNNRL-SSLPH 905
            :....|.|..|..:|.|.|..|.| .::||
plant   820 SSSIPANFSKLKDIESLDLSYNMLQGNIPH 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 5/22 (23%)
LRR_8 115..181 CDD:290566 19/100 (19%)
leucine-rich repeat 116..146 CDD:275380 10/42 (24%)
leucine-rich repeat 147..170 CDD:275380 5/25 (20%)
leucine-rich repeat 171..201 CDD:275380 10/48 (21%)
LRR_RI 210..464 CDD:238064 82/279 (29%)
leucine-rich repeat 212..236 CDD:275380 8/26 (31%)
LRR_8 235..295 CDD:290566 24/61 (39%)
leucine-rich repeat 237..260 CDD:275380 8/23 (35%)
leucine-rich repeat 261..284 CDD:275380 9/23 (39%)
LRR_8 283..345 CDD:290566 28/76 (37%)
leucine-rich repeat 285..308 CDD:275380 11/25 (44%)
leucine-rich repeat 309..334 CDD:275380 11/24 (46%)
LRR_8 334..393 CDD:290566 15/70 (21%)
leucine-rich repeat 335..358 CDD:275380 9/34 (26%)
leucine-rich repeat 359..382 CDD:275380 4/22 (18%)
LRR_8 382..441 CDD:290566 17/62 (27%)
leucine-rich repeat 383..406 CDD:275380 6/22 (27%)
leucine-rich repeat 407..430 CDD:275380 6/26 (23%)
LRR_8 431..488 CDD:290566 17/58 (29%)
leucine-rich repeat 431..451 CDD:275380 8/21 (38%)
leucine-rich repeat 454..477 CDD:275380 2/22 (9%)
LRR_8 477..559 CDD:290566 25/87 (29%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 5/27 (19%)
leucine-rich repeat 590..617 CDD:275380 9/29 (31%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 11/46 (24%)
LRRCT 679..736 CDD:214507 15/71 (21%)
leucine-rich repeat 775..796 CDD:275380 1/20 (5%)
LRR_8 797..852 CDD:290566 11/55 (20%)
leucine-rich repeat 797..817 CDD:275380 6/20 (30%)
leucine-rich repeat 818..841 CDD:275380 2/22 (9%)
LRR_8 841..900 CDD:290566 19/58 (33%)
leucine-rich repeat 842..865 CDD:275380 6/22 (27%)
LRR_4 866..907 CDD:289563 16/41 (39%)
leucine-rich repeat 866..889 CDD:275380 9/22 (41%)
leucine-rich repeat 890..911 CDD:275380 7/17 (41%)
TIR 1045..1183 CDD:214587
RLP14NP_177558.4 LRRNT_2 31..75 CDD:311940 11/44 (25%)
PLN00113 <107..>322 CDD:331614 68/224 (30%)
leucine-rich repeat 108..139 CDD:275380 5/30 (17%)
leucine-rich repeat 140..163 CDD:275380 6/22 (27%)
leucine-rich repeat 164..188 CDD:275380 2/23 (9%)
leucine-rich repeat 189..211 CDD:275380 8/26 (31%)
leucine-rich repeat 212..236 CDD:275380 8/23 (35%)
leucine-rich repeat 237..261 CDD:275380 9/23 (39%)
leucine-rich repeat 262..285 CDD:275380 11/25 (44%)
PLN00113 265..>893 CDD:331614 165/683 (24%)
leucine-rich repeat 286..309 CDD:275380 11/24 (46%)
leucine-rich repeat 310..334 CDD:275380 6/23 (26%)
leucine-rich repeat 335..383 CDD:275380 12/60 (20%)
leucine-rich repeat 384..402 CDD:275380 4/17 (24%)
leucine-rich repeat 409..430 CDD:275380 8/20 (40%)
leucine-rich repeat 431..455 CDD:275380 12/49 (24%)
leucine-rich repeat 456..479 CDD:275380 4/22 (18%)
leucine-rich repeat 483..504 CDD:275380 4/24 (17%)
leucine-rich repeat 505..528 CDD:275380 7/25 (28%)
leucine-rich repeat 529..552 CDD:275380 6/24 (25%)
leucine-rich repeat 553..577 CDD:275380 8/23 (35%)
leucine-rich repeat 578..601 CDD:275380 3/22 (14%)
leucine-rich repeat 602..627 CDD:275380 8/28 (29%)
leucine-rich repeat 648..670 CDD:275380 4/21 (19%)
leucine-rich repeat 671..694 CDD:275380 4/22 (18%)
leucine-rich repeat 695..716 CDD:275380 7/25 (28%)
leucine-rich repeat 739..808 CDD:275380 17/103 (17%)
leucine-rich repeat 809..832 CDD:275380 9/22 (41%)
leucine-rich repeat 833..856 CDD:275380 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I1925
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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