DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT1G72950

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_177438.1 Gene:AT1G72950 / 843626 AraportID:AT1G72950 Length:379 Species:Arabidopsis thaliana


Alignment Length:413 Identity:85/413 - (20%)
Similarity:142/413 - (34%) Gaps:149/413 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   802 NNMPELEV-----GHLTGRRNLRALY--LNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTE 859
            |.:|:.:|     |..|.|..:..||  |...|:.|.::..  :|.|.|  .:....:.|:||:.
plant     6 NTLPKFDVFLSFRGLDTRRSFISFLYKELIRRNIRTFKDDK--ELKNGR--RITPELIRAIEGSR 66

  Fly   860 F----------RSLGLLRELYLHNNMLTHISNATFEPLVSLEVL--------------------- 893
            |          .|...|.||         :....||.:.||:|:                     
plant    67 FAVVVVSVNYAASRWCLEEL---------VKIMDFENMGSLKVMPIFYGVDPCHVRRQIGEVAEQ 122

  Fly   894 ------RLDNNRLSSLPHLQYRHSLQGLT--LGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIY 950
                  |.|:.::     |.:|.:|..|.  .|..:|..            .|::.:|.:..|  
plant   123 FKKHEGREDHEKV-----LSWRQALTNLASISGDCSWKW------------EDDSKMVEEITD-- 168

  Fly   951 CLDAGIKRELELIGNLANGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVF 1015
                .|.:||.:....:||.|... :||....:         :||..|.:               
plant   169 ----RISKELMIDTTRSNGSDLEG-IDAHMKAL---------HRLLNLNS--------------- 204

  Fly  1016 VFRESVR---MWLFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVC-----RNIAAE--LEHG 1070
              ::|||   :|.....| |....:|     :|..|..|    :|..|     :.|:.:  |.|.
plant   205 --KKSVRVIGIWARGGNG-RSALAKF-----VYQNICQH----FESHCFLESVKRISQDRHLSHL 257

  Fly  1071 RPPFRLCIQQRDLPPQASHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKL 1135
            ...|.:.||...|    |.|:|     .::|::||      |.:.|::|..:|..|.........
plant   258 HEEFMIRIQGECL----SKLRL-----KNQKVLLV------ADDVNKLEQLDALAEDFNCFGPGS 307

  Fly  1136 VIIEETS-----VSAEAEDVAEL 1153
            ::|..|.     :||..:.|.|:
plant   308 IVIITTQDRQLLISAGIKLVYEV 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380
leucine-rich repeat 359..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..430 CDD:275380
leucine-rich repeat 431..451 CDD:275380
leucine-rich repeat 454..477 CDD:275380
leucine-rich repeat 478..499 CDD:275380
leucine-rich repeat 502..525 CDD:275380
leucine-rich repeat 526..548 CDD:275380
leucine-rich repeat 590..617 CDD:275380
leucine-rich repeat 618..641 CDD:275380
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914 34/163 (21%)
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380 6/19 (32%)
leucine-rich repeat 818..841 CDD:275380 6/24 (25%)
leucine-rich repeat 842..865 CDD:275380 6/32 (19%)
leucine-rich repeat 866..889 CDD:275380 5/22 (23%)
leucine-rich repeat 890..911 CDD:275380 6/47 (13%)
TIR 1045..1183 CDD:214587 29/121 (24%)
AT1G72950NP_177438.1 PLN03210 2..>368 CDD:215633 85/413 (21%)
TIR 11..175 CDD:396246 38/199 (19%)
Blue background indicates that the domain is not in the aligned region.

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