DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT1G72860

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001322142.1 Gene:AT1G72860 / 843617 AraportID:AT1G72860 Length:1306 Species:Arabidopsis thaliana


Alignment Length:1361 Identity:246/1361 - (18%)
Similarity:412/1361 - (30%) Gaps:566/1361 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YGLTTM-DIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQEL-LHASELAPGL----------F 86
            ||:.|: :::|    :::.....|..|:|........:..::| :.||.||.||          |
plant   334 YGVRTVYEVKC----MDNDAALQLFNQLAFKGALPPSELYEKLSIRASWLAQGLPVAIEAYGLFF 394

  Fly    87 RQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELH 151
            |::..|.|.....|:....|.   |.:|.:.::                    |:.||:|.    
plant   395 RRMTSLKEWDDALCRFIEAPD---ESVMEILKI--------------------SYDGLEET---- 432

  Fly   152 LGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLD 216
              |.|:                               |....|.                     
plant   433 --DKNV-------------------------------FLHVACL--------------------- 443

  Fly   217 VSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVL------------NISYN 269
              ||          ...|||..||         |....|.|...|::|            .|..:
plant   444 --FN----------GEPLRRATTL---------LDDGVLQGCLGLKILAEKSLIEITASGYIKMH 487

  Fly   270 HLVSLPSEAFAGNKELRELHLQG-----NDLYELPKG----------LLHRLEQLLVLDLSGNQL 319
            :||...:.|....:.::..|.:|     .::|||.|.          .||..:.:..|.|.|  .
plant   488 NLVDQTARAIVNQESMQRRHGRGVLWNPYEIYELLKRNTTSEPTNCMALHMCDMVYALHLGG--Y 550

  Fly   320 TSHHVDNSTFAGLIRLIVLNLSNNALTRI---GSKT-----------------------FKELYF 358
            |::| |...|     |.:...||:..:::   |..|                       |:....
plant   551 TAYH-DTLKF-----LKIYKHSNHIKSKLLFSGDDTNLLSSRLRLLHWDAFPLTTFPCRFQPQDL 609

  Fly   359 LQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQ 423
            ::|:..|:|.....:|...:|  ||..|:|:::          ..|..|..|::..||..::.  
plant   610 VEIILHRSNLTSFWKETVGMP--NLRRLDLSDS----------ENLEQLPDLSMAVNLEELIT-- 660

  Fly   424 AFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGE-NQISEFKNNTFRNLNQ--------LT 479
              :.|..||          ::||::..|:.|.|||:.. .:::.:  .|.|.||:        .:
plant   661 --QGCKRLK----------KIPESISYLTRLTTLDVSYCEELASY--ITIRELNRSGRQIALYFS 711

  Fly   480 GLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKN-----FLTDI 539
            |..:....|.|:::|                           .|..|:...||.|     |.|:.
plant   712 GKEVETRSIANLSIG---------------------------GNIHIQMFWLDGNVDHLSFTTEQ 749

  Fly   540 NG-----------------------------IFATLASLL----------------WL----NLS 555
            .|                             |.....||:                |:    .|:
plant   750 QGPDKLTKKEKQQAPGELTKREQQQEPRKKTILCGFGSLMRKGRKVKATSEFLDHEWMMQRDQLA 814

  Fly   556 ENHLVWFDYA--------FIPSNLKWLDIHG--NYIEALGNYYKLQEEIRVTTLDASHNRITEIG 610
            .::....:::        |:|      :.||  :..:|.|......:....|::|.|..|.:..|
plant   815 PDNQQALEFSTRTRQALQFLP------EFHGQESVKKAQGKSQPTSKFHGFTSVDISRFRYSSDG 873

  Fly   611 AMSVPNSI-------ELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAE 668
            |..:..|:       ||:.||.||                                         
plant   874 ASFLCFSLSMFPCVKELILINLNI----------------------------------------- 897

  Fly   669 KPVPEFYLGGNPFECDCSMEWLQRI----NNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLS 729
            |.:|:..         |.:::|:::    |:..|.  |..::      .:|..:.|..|....|.
plant   898 KVIPDDV---------CGLKFLEKLDWSGNDFETL--PETMN------QLPRLKYASFRNCCRLK 945

  Fly   730 ASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGR-QDLAALPNRIPQD 793
            |...:.:.|:.....|.               |.....:.::|..  |||| |.|          
plant   946 ALPALVQLETIKLSGCI---------------NLQSLLELSYAEQ--DCGRFQWL---------- 983

  Fly   794 VSDLYLDGNNMPELEVGHLTGRRNLRALYLN-ASNLMTLQNGSLAQLVNLRVLHLEN-NKLTALE 856
              :|::||.......:..|  |..::..||: :|:.......|:..|.:||.|.|.. .||.::|
plant   984 --ELWVDGCKSIRSILDQL--RHFIKLSYLDLSSHEFEKLPSSIEVLSSLRTLCLNKCKKLKSIE 1044

  Fly   857 GTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRNA 921
            |...    .|:.||.|...:             ||.:.|..|.  |:.||...|.. ||.     
plant  1045 GLPL----CLKSLYAHGCEI-------------LETVSLPLNH--SVKHLDLSHCF-GLK----- 1084

  Fly   922 WSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIG-NLANGPDCSDLLDASASNISS 985
               |.:.|  :|||:::.                 :.|.|.:| ....|.:.....|......|.
plant  1085 ---RDEHL--IAQFLNEG-----------------ENEEESLGFAFFPGTEVPSYFDHIDKGKSL 1127

  Fly   986 SQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFAHYGVRVCEPRFEDAGKLYDAIIL 1050
            :.||...:..|.|     |.|...|:|                    .||..|:         |.
plant  1128 TIDLPQIWPSPKL-----LGFDACVVI--------------------ACERPFD---------IQ 1158

  Fly  1051 HSEKDYE-------FVCRNIAAELEHGRPPFRLCIQQRDLPPQASHLQLVEGARASRKIILVLTR 1108
            .|...|:       :.|..:..:. |...|   ..:..:...::.||.::.|.:           
plant  1159 FSPFSYDWDWGYERYFCLYLKPDF-HSTDP---STEDEEEVVKSDHLLIIRGLK----------- 1208

  Fly  1109 NLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPYLKSVPSNRLLTCD-RYF 1172
                      .|.|..:        ||.|..:...|.|          ||| ||.:|.:|. |..
plant  1209 ----------NFSNQIN--------KLGIKSDLQFSEE----------LKS-PSAKLQSCGIRLI 1244

  Fly  1173 WEKLRYAIPIE----------LSPRGNNYTLDHHERFKQPVSPGMIFRQAPPPPAYYCTEE 1223
            ||..:....||          |...|:| :|::     ...||....:...|||....|:|
plant  1245 WEVGQADKSIEGEELPLSLEHLYAHGSN-SLEN-----DSFSPNHSIKYPLPPPESRRTQE 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 9/35 (26%)
leucine-rich repeat 92..115 CDD:275380 5/22 (23%)
LRR_8 115..181 CDD:404697 6/65 (9%)
leucine-rich repeat 116..146 CDD:275380 3/29 (10%)
leucine-rich repeat 147..170 CDD:275380 2/22 (9%)
leucine-rich repeat 171..201 CDD:275380 2/29 (7%)
LRR 210..592 CDD:443914 88/507 (17%)
leucine-rich repeat 212..236 CDD:275380 3/23 (13%)
leucine-rich repeat 237..260 CDD:275380 5/22 (23%)
leucine-rich repeat 261..284 CDD:275380 6/34 (18%)
leucine-rich repeat 285..308 CDD:275380 8/37 (22%)
leucine-rich repeat 309..334 CDD:275380 7/24 (29%)
leucine-rich repeat 335..358 CDD:275380 6/48 (13%)
leucine-rich repeat 359..382 CDD:275380 5/22 (23%)
leucine-rich repeat 383..406 CDD:275380 4/22 (18%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 4/19 (21%)
leucine-rich repeat 454..477 CDD:275380 7/23 (30%)
leucine-rich repeat 478..499 CDD:275380 4/20 (20%)
leucine-rich repeat 502..525 CDD:275380 1/22 (5%)
leucine-rich repeat 526..548 CDD:275380 8/55 (15%)
leucine-rich repeat 590..617 CDD:275380 6/26 (23%)
leucine-rich repeat 618..641 CDD:275380 6/29 (21%)
leucine-rich repeat 642..689 CDD:275380 3/46 (7%)
LRRCT 679..736 CDD:214507 10/60 (17%)
LRR <775..>920 CDD:443914 38/147 (26%)
leucine-rich repeat 775..796 CDD:275380 6/21 (29%)
leucine-rich repeat 797..817 CDD:275380 5/19 (26%)
leucine-rich repeat 818..841 CDD:275380 5/23 (22%)
leucine-rich repeat 842..865 CDD:275380 8/23 (35%)
leucine-rich repeat 866..889 CDD:275380 4/22 (18%)
leucine-rich repeat 890..911 CDD:275380 7/20 (35%)
TIR 1045..1183 CDD:214587 26/145 (18%)
AT1G72860NP_001322142.1 PLN03210 1..1262 CDD:215633 235/1316 (18%)
leucine-rich repeat 887..909 CDD:275380 9/71 (13%)
leucine-rich repeat 910..932 CDD:275380 4/29 (14%)
leucine-rich repeat 980..1005 CDD:275380 7/38 (18%)
leucine-rich repeat 1006..1028 CDD:275380 5/21 (24%)
leucine-rich repeat 1050..1071 CDD:275380 8/35 (23%)

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