DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT1G72180

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_177363.1 Gene:AT1G72180 / 843550 AraportID:AT1G72180 Length:977 Species:Arabidopsis thaliana


Alignment Length:628 Identity:166/628 - (26%)
Similarity:255/628 - (40%) Gaps:133/628 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PPNA-----FEGLMSLKRLTLESHNAV--WGP--------GKTLE-LHGQ--------------- 139
            |||.     .:.|...|....:|||.:  |.|        |.|.: |.|:               
plant    26 PPNVESTVEKQALFRFKNRLDDSHNILQSWKPSDSPCVFRGITCDPLSGEVIGISLGNVNLSGTI 90

  Fly   140 --SFQGLKELSELHLGDNNI--RQLPEGVWCSMPSLQLLNLTQNR----------IRSAEFLGFS 190
              |...|.:||.|.|..|.|  |..||.|.|.  :|::||||.||          ::|.|.|..|
plant    91 SPSISALTKLSTLSLPSNFISGRIPPEIVNCK--NLKVLNLTSNRLSGTIPNLSPLKSLEILDIS 153

  Fly   191 EKLCAG---SALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAP 252
            .....|   |.:.|.|..||.|     |..:..|...:|::.|.  |::|..|.|..:|::...|
plant   154 GNFLNGEFQSWIGNMNQLVSLG-----LGNNHYEEGIIPESIGG--LKKLTWLFLARSNLTGKIP 211

  Fly   253 NALAGLSSLRVLNISYNHLVSLPSEAF----AGNKELRELHLQGNDLYELPKGLLHRLEQLLVLD 313
            |::..|::|...:|:.|.:    |:.|    :....|.::.|..|.|.......:..|.:|...|
plant   212 NSIFDLNALDTFDIANNAI----SDDFPILISRLVNLTKIELFNNSLTGKIPPEIKNLTRLREFD 272

  Fly   314 LSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDM-RNNSIGH--IEEG 375
            :|.|||:.  |.......|..|.|.:...|..|......|.:|..|..|.: |||..|.  :..|
plant   273 ISSNQLSG--VLPEELGVLKELRVFHCHENNFTGEFPSGFGDLSHLTSLSIYRNNFSGEFPVNIG 335

  Fly   376 AFLPLYNLHTLNLAENR-----------------LHTLDN-------RIFNGLYVLTKLTLNNNL 416
            .|.|   |.|::::||.                 |..|.|       |.:.....|.:|.:|||.
plant   336 RFSP---LDTVDISENEFTGPFPRFLCQNKKLQFLLALQNEFSGEIPRSYGECKSLLRLRINNNR 397

  Fly   417 VSIVESQAFRNCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTG 480
            :|....:.|.:....|.:|||.|:|| ||...:...:.|..|.|..|:   |.....|.|.:||.
plant   398 LSGQVVEGFWSLPLAKMIDLSDNELTGEVSPQIGLSTELSQLILQNNR---FSGKIPRELGRLTN 459

  Fly   481 LRLI----DNRIGNI--TVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLT-D 538
            :..|    :|..|.|  .||   ||..||.|:|..|.:............::..:.|.||||| :
plant   460 IERIYLSNNNLSGEIPMEVG---DLKELSSLHLENNSLTGFIPKELKNCVKLVDLNLAKNFLTGE 521

  Fly   539 INGIFATLASLLWLNLSENHLVWFDYAFIPSN-----LKWLDIHGNYIE--------ALG--NYY 588
            |....:.:|||..|:.|.|.|.    ..||::     |.::|:.||.:.        |:|  ..:
plant   522 IPNSLSQIASLNSLDFSGNRLT----GEIPASLVKLKLSFIDLSGNQLSGRIPPDLLAVGGSTAF 582

  Fly   589 KLQEEIRVTTLDASHNRITEIGAMSVPNSIELLFINNNIIGQI 631
            ...|::.|...:|..|:  .:| :|:.:..:.:..|:::.|.:
plant   583 SRNEKLCVDKENAKTNQ--NLG-LSICSGYQNVKRNSSLDGTL 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 4/13 (31%)
LRR_8 115..181 CDD:404697 30/105 (29%)
leucine-rich repeat 116..146 CDD:275380 12/57 (21%)
leucine-rich repeat 147..170 CDD:275380 11/24 (46%)
leucine-rich repeat 171..201 CDD:275380 13/42 (31%)
LRR 210..592 CDD:443914 113/435 (26%)
leucine-rich repeat 212..236 CDD:275380 5/23 (22%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 5/26 (19%)
leucine-rich repeat 285..308 CDD:275380 5/22 (23%)
leucine-rich repeat 309..334 CDD:275380 8/24 (33%)
leucine-rich repeat 335..358 CDD:275380 6/22 (27%)
leucine-rich repeat 359..382 CDD:275380 9/25 (36%)
leucine-rich repeat 383..406 CDD:275380 8/46 (17%)
leucine-rich repeat 407..430 CDD:275380 7/22 (32%)
leucine-rich repeat 431..451 CDD:275380 9/20 (45%)
leucine-rich repeat 454..477 CDD:275380 7/22 (32%)
leucine-rich repeat 478..499 CDD:275380 8/26 (31%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 7/22 (32%)
leucine-rich repeat 590..617 CDD:275380 6/26 (23%)
leucine-rich repeat 618..641 CDD:275380 2/14 (14%)
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT1G72180NP_177363.1 PLN00113 19..961 CDD:215061 166/628 (26%)
leucine-rich repeat 100..123 CDD:275380 11/24 (46%)
leucine-rich repeat 124..146 CDD:275380 7/21 (33%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..195 CDD:275380 8/30 (27%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
leucine-rich repeat 220..243 CDD:275380 5/26 (19%)
leucine-rich repeat 244..267 CDD:275380 5/22 (23%)
leucine-rich repeat 268..291 CDD:275380 8/24 (33%)
leucine-rich repeat 292..313 CDD:275380 5/20 (25%)
leucine-rich repeat 316..338 CDD:275380 7/21 (33%)
leucine-rich repeat 364..387 CDD:275380 4/22 (18%)
leucine-rich repeat 388..411 CDD:275380 7/22 (32%)
leucine-rich repeat 412..435 CDD:275380 9/22 (41%)
leucine-rich repeat 436..459 CDD:275380 8/25 (32%)
leucine-rich repeat 460..483 CDD:275380 8/25 (32%)
leucine-rich repeat 484..507 CDD:275380 5/22 (23%)
leucine-rich repeat 508..531 CDD:275380 7/22 (32%)
leucine-rich repeat 532..554 CDD:275380 7/25 (28%)
leucine-rich repeat 555..575 CDD:275380 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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