DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT1G69550

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_564971.2 Gene:AT1G69550 / 843291 AraportID:AT1G69550 Length:1400 Species:Arabidopsis thaliana


Alignment Length:760 Identity:196/760 - (25%)
Similarity:310/760 - (40%) Gaps:189/760 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKEL 147
            |..| .|:.|.::.:...:|:::    :||:..|..|            |.::|...|.  ||||
plant   664 PSKF-NLKFLVKIILKHSELEKL----WEGIQPLVNL------------KVMDLRYSSH--LKEL 709

  Fly   148 SELHLGDNNIRQLPEGVWCS----MPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSN----ANG 204
            ..|....|.:..:...  ||    :|| .:.|.|  .|:|.:..|.|..|...|::.|    ...
plant   710 PNLSTAINLLEMVLSD--CSSLIELPS-SIGNAT--NIKSLDIQGCSSLLKLPSSIGNLITLPRL 769

  Fly   205 AVSGGSELQTLDVSFNELRSLP--DAWGASRLRRLQT-----LSLQ----HNNISTL-APNALAG 257
            .:.|.|.|..|..|...|.:||  |..|.|.|..|.:     ::|:    |...|.| .|:::..
plant   770 DLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGN 834

  Fly   258 LSSLRVLNIS-YNHLVSLPSEAFAGNK-ELRELHLQG-NDLYELPKGLLHRLEQLLVLDLSGNQL 319
            |.||::|.:. .:.||.:||.  .||. .|:.|:|.| :.|.|||.. :..|..|..||||    
plant   835 LISLKILYLKRISSLVEIPSS--IGNLINLKLLNLSGCSSLVELPSS-IGNLINLKKLDLS---- 892

  Fly   320 TSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRN--NSIGHIEEGAFLPLYN 382
                       |...|:.|.||...|..:     :|||..:...:..  :|||:        |.|
plant   893 -----------GCSSLVELPLSIGNLINL-----QELYLSECSSLVELPSSIGN--------LIN 933

  Fly   383 LHTLNLAE-NRLHTLDNRIFNGLYVLTKLTLN--NNLVSIVESQAFRNCSDLKELDLSS-NQLTE 443
            |.||||:| :.|..|.:.|.| |..|.:|.|:  ::||.:..|  ..|..:||:||||. :.|.|
plant   934 LKTLNLSECSSLVELPSSIGN-LINLQELYLSECSSLVELPSS--IGNLINLKKLDLSGCSSLVE 995

  Fly   444 VPEAVQDLSMLKTLDLGE--------NQISEFKNNTFRNLNQLTGLRLIDNRIGNIT-------- 492
            :|.::.:|..||||:|.|        :.|....|.....|::.:.|..:.:.|||:.        
plant   996 LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLS 1060

  Fly   493 -VGMFQDLPRLSVLNLAKNRIQSIE--RGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNL 554
             .....:|| ||:.||...:..::.  ....:..:.|..:.|.|   .|::|    .:||:.|..
plant  1061 GCSSLVELP-LSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKK---LDLSG----CSSLVELPS 1117

  Fly   555 SENHLVWFDYAFIPSNLKWLDIHG--NYIE---ALGNYYKLQEEIRVTTLDASHNRITEIGAM-S 613
            |..:|:         |||.||:.|  :.:|   ::||...|||..           ::|..:: .
plant  1118 SIGNLI---------NLKKLDLSGCSSLVELPLSIGNLINLQELY-----------LSECSSLVE 1162

  Fly   614 VPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANV-----LSKISLN------ALRVAPVSA 667
            :|:||      .|:| .:|.....:.:.|  |:|.:::     |.|:.||      :|...|.|.
plant  1163 LPSSI------GNLI-NLQELYLSECSSL--VELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSL 1218

  Fly   668 EKPVPEFYLGGNPFECD------CSME----WLQRIN--NLTTRQHPHVVDLGNIECLMPHSRSA 720
            ...|.|        .|:      ||..    ||:.|:  .|..:....:|........|...|..
plant  1219 SVLVAE--------SCESLETLACSFPNPQVWLKFIDCWKLNEKGRDIIVQTSTSNYTMLPGREV 1275

  Fly   721 P--LRPLASLSASDFVCKYESHCPPTCH--CC-----EYEQCECE 756
            |  ....|:...|..|...|.||..:|.  .|     :.::.:||
plant  1276 PAFFTYRATTGGSLAVKLNERHCRTSCRFKACILLVRKGDKIDCE 1320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 3/7 (43%)
leucine-rich repeat 92..115 CDD:275380 4/22 (18%)
LRR_8 115..181 CDD:404697 17/69 (25%)
leucine-rich repeat 116..146 CDD:275380 6/29 (21%)
leucine-rich repeat 147..170 CDD:275380 5/26 (19%)
leucine-rich repeat 171..201 CDD:275380 8/29 (28%)
LRR 210..592 CDD:443914 122/426 (29%)
leucine-rich repeat 212..236 CDD:275380 10/25 (40%)
leucine-rich repeat 237..260 CDD:275380 7/32 (22%)
leucine-rich repeat 261..284 CDD:275380 8/24 (33%)
leucine-rich repeat 285..308 CDD:275380 9/23 (39%)
leucine-rich repeat 309..334 CDD:275380 6/24 (25%)
leucine-rich repeat 335..358 CDD:275380 7/22 (32%)
leucine-rich repeat 359..382 CDD:275380 4/24 (17%)
leucine-rich repeat 383..406 CDD:275380 11/23 (48%)
leucine-rich repeat 407..430 CDD:275380 7/24 (29%)
leucine-rich repeat 431..451 CDD:275380 9/20 (45%)
leucine-rich repeat 454..477 CDD:275380 9/30 (30%)
leucine-rich repeat 478..499 CDD:275380 4/29 (14%)
leucine-rich repeat 502..525 CDD:275380 4/24 (17%)
leucine-rich repeat 526..548 CDD:275380 5/21 (24%)
leucine-rich repeat 590..617 CDD:275380 5/27 (19%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 15/67 (22%)
LRRCT 679..736 CDD:214507 14/70 (20%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT1G69550NP_564971.2 PLN03210 76..1059 CDD:215633 128/452 (28%)
leucine-rich repeat 695..718 CDD:275380 9/36 (25%)
leucine-rich repeat 719..741 CDD:275380 6/26 (23%)
leucine-rich repeat 742..765 CDD:275380 7/22 (32%)
leucine-rich repeat 766..789 CDD:275380 6/22 (27%)
leucine-rich repeat 790..813 CDD:275380 7/22 (32%)
leucine-rich repeat 814..837 CDD:275380 6/22 (27%)
leucine-rich repeat 886..909 CDD:275380 11/37 (30%)
leucine-rich repeat 910..933 CDD:275380 7/35 (20%)
leucine-rich repeat 934..957 CDD:275380 11/23 (48%)
leucine-rich repeat 958..981 CDD:275380 7/24 (29%)
leucine-rich repeat 982..1005 CDD:275380 10/22 (45%)
leucine-rich repeat 1006..1029 CDD:275380 7/22 (32%)
leucine-rich repeat 1030..1053 CDD:275380 5/22 (23%)
PLN03210 <1053..1310 CDD:215633 66/301 (22%)
leucine-rich repeat 1054..1077 CDD:275380 6/23 (26%)
leucine-rich repeat 1078..1100 CDD:275380 1/21 (5%)
leucine-rich repeat 1101..1124 CDD:275380 9/38 (24%)
leucine-rich repeat 1125..1148 CDD:275380 8/22 (36%)
leucine-rich repeat 1149..1170 CDD:275380 7/37 (19%)
leucine-rich repeat 1173..1196 CDD:275380 4/24 (17%)
C-JID 1270..1359 CDD:466313 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

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