DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and RLP9

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001185260.1 Gene:RLP9 / 842186 AraportID:AT1G58190 Length:1029 Species:Arabidopsis thaliana


Alignment Length:864 Identity:201/864 - (23%)
Similarity:325/864 - (37%) Gaps:253/864 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 EGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLP 226
            |.|.|...|.:::.|..|:.       ||:.:....:|.:                .|.|||:|.
plant    63 ERVECDRTSGRVIGLFLNQT-------FSDPILINLSLFH----------------PFEELRTLN 104

  Fly   227 ------DAW--------GASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSE 277
                  ..|        ...:|::|:.|.:.:|.::......|...||||.|.:..|::     |
plant   105 LYDFGCTGWFDDIHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNM-----E 164

  Fly   278 AFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLI---RLIVLN 339
            .....|||::                  |..|.:||||||.|      |....||.   :|..|:
plant   165 GTFPMKELKD------------------LSNLELLDLSGNLL------NGPVPGLAVLHKLHALD 205

  Fly   340 LSNN----ALTRIGSKTFKELYFLQILDMRNNSI--------------------GHIEEGAF--- 377
            ||:|    :|.|.|.|:|:.|..|:|||:..|.:                    |:..||.|   
plant   206 LSDNTFSGSLGREGYKSFERLKNLEILDISENGVNNTVLPFINTASSLKTLILHGNNMEGTFPMK 270

  Fly   378 --LPLYNLHTLNLAENR----------LHTL------DNRIFNGLYVLTKLTLNNNLVSIVESQA 424
              :.|.||..|:|::|:          .|.|      ||: |:|        .|..|..:     
plant   271 ELINLRNLELLDLSKNQFVGPVPDLANFHNLQGLDMSDNK-FSG--------SNKGLCQL----- 321

  Fly   425 FRNCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI 488
                .:|:|||||.|:.| :.|:....|:.|:.||:..|..:....:..|||:.:..|.|.||..
plant   322 ----KNLRELDLSQNKFTGQFPQCFDSLTQLQVLDISSNNFNGTVPSLIRNLDSVEYLALSDNEF 382

  Fly   489 -GNITVGMFQDLPRLSVLNLA--KNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLL 550
             |..::.:..:|.:|.|..|:  .|.::..:..:.....::..|.|....|.::.........|.
plant   383 KGFFSLELIANLSKLKVFKLSSRSNLLRLKKLSSLQPKFQLSVIELQNCNLENVPSFIQHQKDLH 447

  Fly   551 WLNLSENHLVW-FDYAFIPS--NLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASH--NRITEIG 610
            .:|||.|.|.. |.|..:..  ||:.|.:..|.:..|.....|...:::..|.|::  .|:.|..
plant   448 VINLSNNKLTGVFPYWLLEKYPNLRVLLLQNNSLTMLELPRLLNHTLQILDLSANNFDQRLPENI 512

  Fly   611 AMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFY 675
            ...:|| |..|.::||....|..::|.:...:..:||..|             ..|...|: :|.
plant   513 GKVLPN-IRHLNLSNNGFQWILPSSFGEMKDIKFLDLSHN-------------NFSGSLPM-KFL 562

  Fly   676 LGGNPFECDCSMEWLQRI--NNLTTRQHPHVVDLGNIECLMPHSR-----SAPLRPLASLSASDF 733
            :|       ||.....::  |....:..|...:.|::..|:.::.     :..||.:.||...|.
plant   563 IG-------CSSLHTLKLSYNKFFGQIFPKQTNFGSLVVLIANNNLFTGIADGLRNVQSLGVLDL 620

  Fly   734 VCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATW-----------ATNIVDCGRQDLAALP 787
            ...|.....|                          :|           :.|:::      ..||
plant   621 SNNYLQGVIP--------------------------SWFGGFFFAYLFLSNNLLE------GTLP 653

  Fly   788 NRI--PQDVSDLYLDGN----NMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQ--LVNLRV 844
            :.:  ......|.|.||    |:|    .|.|| .::..||||.:..    :|::..  :.::.|
plant   654 STLFSKPTFKILDLSGNKFSGNLP----SHFTG-MDMSLLYLNDNEF----SGTIPSTLIKDVLV 709

  Fly   845 LHLENNKLTALEGT--EFRSLGLLRELYLHNNMLT-HISNATFEP-----LVSLEVLRLDNNRL- 900
            |.|.||||:   ||  .|.....:..|.|..|.|| ||      |     |.|:.:|.|.|||| 
plant   710 LDLRNNKLS---GTIPHFVKNEFILSLLLRGNTLTGHI------PTDLCGLRSIRILDLANNRLK 765

  Fly   901 SSLPHLQYRHSLQGLTLGR 919
            .|:|     ..|..::.||
plant   766 GSIP-----TCLNNVSFGR 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697 6/18 (33%)
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380 3/7 (43%)
leucine-rich repeat 171..201 CDD:275380 5/29 (17%)
LRR 210..592 CDD:443914 111/450 (25%)
leucine-rich repeat 212..236 CDD:275380 7/37 (19%)
leucine-rich repeat 237..260 CDD:275380 4/22 (18%)
leucine-rich repeat 261..284 CDD:275380 5/22 (23%)
leucine-rich repeat 285..308 CDD:275380 2/22 (9%)
leucine-rich repeat 309..334 CDD:275380 11/27 (41%)
leucine-rich repeat 335..358 CDD:275380 11/26 (42%)
leucine-rich repeat 359..382 CDD:275380 10/47 (21%)
leucine-rich repeat 383..406 CDD:275380 10/38 (26%)
leucine-rich repeat 407..430 CDD:275380 2/22 (9%)
leucine-rich repeat 431..451 CDD:275380 9/20 (45%)
leucine-rich repeat 454..477 CDD:275380 7/22 (32%)
leucine-rich repeat 478..499 CDD:275380 5/21 (24%)
leucine-rich repeat 502..525 CDD:275380 4/24 (17%)
leucine-rich repeat 526..548 CDD:275380 3/21 (14%)
leucine-rich repeat 590..617 CDD:275380 6/28 (21%)
leucine-rich repeat 618..641 CDD:275380 6/22 (27%)
leucine-rich repeat 642..689 CDD:275380 9/46 (20%)
LRRCT 679..736 CDD:214507 11/63 (17%)
LRR <775..>920 CDD:443914 47/162 (29%)
leucine-rich repeat 775..796 CDD:275380 2/22 (9%)
leucine-rich repeat 797..817 CDD:275380 9/23 (39%)
leucine-rich repeat 818..841 CDD:275380 5/24 (21%)
leucine-rich repeat 842..865 CDD:275380 10/24 (42%)
leucine-rich repeat 866..889 CDD:275380 9/28 (32%)
leucine-rich repeat 890..911 CDD:275380 8/21 (38%)
TIR 1045..1183 CDD:214587
RLP9NP_001185260.1 PLN00113 7..>699 CDD:215061 170/768 (22%)
leucine-rich repeat 129..152 CDD:275380 4/22 (18%)
leucine-rich repeat 153..177 CDD:275380 9/46 (20%)
leucine-rich repeat 178..200 CDD:275380 11/27 (41%)
leucine-rich repeat 201..228 CDD:275380 11/26 (42%)
leucine-rich repeat 229..277 CDD:275380 10/47 (21%)
leucine-rich repeat 278..300 CDD:275380 4/21 (19%)
leucine-rich repeat 301..323 CDD:275380 7/39 (18%)
leucine-rich repeat 324..347 CDD:275380 10/22 (45%)
leucine-rich repeat 348..371 CDD:275380 7/22 (32%)
leucine-rich repeat 372..396 CDD:275380 6/23 (26%)
PLN00113 422..>953 CDD:215061 98/435 (23%)
leucine-rich repeat 423..445 CDD:275380 3/21 (14%)
leucine-rich repeat 446..470 CDD:275380 8/23 (35%)
leucine-rich repeat 471..493 CDD:275380 5/21 (24%)
leucine-rich repeat 494..518 CDD:275380 4/23 (17%)
leucine-rich repeat 519..542 CDD:275380 6/22 (27%)
leucine-rich repeat 543..567 CDD:275380 8/44 (18%)
leucine-rich repeat 568..591 CDD:275380 2/22 (9%)
leucine-rich repeat 592..614 CDD:275380 3/21 (14%)
leucine-rich repeat 615..637 CDD:275380 5/47 (11%)
leucine-rich repeat 638..661 CDD:275380 3/28 (11%)
leucine-rich repeat 662..684 CDD:275380 9/26 (35%)
leucine-rich repeat 685..707 CDD:275380 5/25 (20%)
leucine-rich repeat 730..753 CDD:275380 9/28 (32%)
leucine-rich repeat 754..780 CDD:275380 11/31 (35%)
leucine-rich repeat 781..867 CDD:275380
leucine-rich repeat 868..891 CDD:275380
leucine-rich repeat 892..912 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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