DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT1G31540

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001117396.1 Gene:AT1G31540 / 840044 AraportID:AT1G31540 Length:1161 Species:Arabidopsis thaliana


Alignment Length:804 Identity:169/804 - (21%)
Similarity:293/804 - (36%) Gaps:241/804 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLTTMD------IRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQELLHASELAPGLFRQLQKLS 93
            ||.:.|      |.|....:|..|...| |..::.:..|:....:.|:|..:....:.|.||::.
plant   431 GLESEDQEIFRHIACLFNHMEVTTIKSL-LADSDVSFALENLADKSLIHVRQGYVVMHRSLQEMG 494

  Fly    94 ---------------ELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQG 143
                           |..:|...:..: .||..|...:..::|:..|.     :.|::|.::|:|
plant   495 RKIVRIQSIDKPGEREFLVDPNDIHDI-LNACTGTQKVLGISLDIRNI-----RELDVHERAFKG 553

  Fly   144 LKELSELHLGDNNIRQ----LPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANG 204
            :..|..|.:.:..:::    ||........:|:||..::..:|...| ||..:            
plant   554 MSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMPF-GFRPE------------ 605

  Fly   205 AVSGGSELQTLDVSFNELRSLPDAW-GASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISY 268
                  .|..|::.:::|..|   | |.:.|..|:.:.|..::...:.|: |:..::|.:||:.:
plant   606 ------NLVKLEMQYSKLHKL---WEGVAPLTCLKEMDLHGSSNLKVIPD-LSEATNLEILNLKF 660

  Fly   269 -NHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGL 332
             ..||.|||.....||.|....|....|..||.|.  .|:.|       ::|..:|...      
plant   661 CESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF--NLKSL-------DRLNLYHCSK------ 710

  Fly   333 IRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLD 397
                             .|||.:  |...:.:.|.::.:||:   .| .|||..||.|.|:...:
plant   711 -----------------LKTFPK--FSTNISVLNLNLTNIED---FP-SNLHLENLVEFRISKEE 752

  Fly   398 N-----------RIFNGLYV---LTKLTLNNNLVSIVE-SQAFRNCSDLKEL------------- 434
            :           ..|..:.:   ||.|.| .||.|:|| :.:|:|.:.||:|             
plant   753 SDEKQWEEEKPLTPFLAMMLSPTLTSLHL-ENLPSLVELTSSFQNLNQLKDLIIINCINLETLPT 816

  Fly   435 --DLSS---------NQLTEVPEAVQDLSMLKTLDLGENQISE-------FKNNTFRNLNQLTGL 481
              :|.|         :||...||...::|:|.   |.|..|.|       |.|.|..::|..:.|
plant   817 GINLQSLDYLCFSGCSQLRSFPEISTNISVLY---LDETAIEEVPWWIEKFSNLTELSMNSCSRL 878

  Fly   482 RLIDNRIGNITVGMFQDLPRLSVLNLAKNR----IQSIERGAFDKNTEIEAIRLDKNFLTDINGI 542
            :.:           |..:.:|..|..|..|    :..:|...:....|:  ::.| |..|..:.:
plant   879 KCV-----------FLHMSKLKHLKEALFRNCGTLTRVELSGYPSGMEV--MKAD-NIDTASSSL 929

  Fly   543 FATLASLL-WLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEI------RVT--- 597
            ...:.|.| ..||....::....:.|          .||:...|     :||:      |.|   
plant   930 PKVVLSFLDCFNLDPETVLHHQESII----------FNYMLFTG-----KEEVPSYFTYRTTGSS 979

  Fly   598 --TLDASHNRITE------IGAMSVPNS---IEL--------LFINN---NIIGQIQANTFV--- 637
              |:...|..:::      |||: |.|.   :||        .|.||   :|..::..:.:.   
plant   980 SLTIPILHVHLSQPFFRFRIGAL-VTNKEEPVELEVKCEFKDRFGNNFDYDIYFEVNKDRYYGED 1043

  Fly   638 ---------------DKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSM 687
                           |...||:.:.|.:|..||.         ..:|...:....|.....|||.
plant  1044 CYNIAILDCRIPLNEDNAALAQRNYYDHVDIKIE---------QLDKRYSDIEQWGIRLLEDCSS 1099

  Fly   688 EWLQRINNLTTRQHPHV--VDLGN 709
            . ..|::|.:....|||  .:.||
plant  1100 A-ETRLDNYSNSTLPHVSEAEEGN 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 5/24 (21%)
leucine-rich repeat 92..115 CDD:275380 5/37 (14%)
LRR_8 115..181 CDD:404697 13/69 (19%)
leucine-rich repeat 116..146 CDD:275380 6/29 (21%)
leucine-rich repeat 147..170 CDD:275380 4/26 (15%)
leucine-rich repeat 171..201 CDD:275380 7/29 (24%)
LRR 210..592 CDD:443914 96/434 (22%)
leucine-rich repeat 212..236 CDD:275380 7/24 (29%)
leucine-rich repeat 237..260 CDD:275380 4/22 (18%)
leucine-rich repeat 261..284 CDD:275380 9/23 (39%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 3/24 (13%)
leucine-rich repeat 335..358 CDD:275380 3/22 (14%)
leucine-rich repeat 359..382 CDD:275380 4/22 (18%)
leucine-rich repeat 383..406 CDD:275380 7/33 (21%)
leucine-rich repeat 407..430 CDD:275380 11/23 (48%)
leucine-rich repeat 431..451 CDD:275380 9/43 (21%)
leucine-rich repeat 454..477 CDD:275380 8/29 (28%)
leucine-rich repeat 478..499 CDD:275380 2/20 (10%)
leucine-rich repeat 502..525 CDD:275380 5/26 (19%)
leucine-rich repeat 526..548 CDD:275380 3/21 (14%)
leucine-rich repeat 590..617 CDD:275380 10/43 (23%)
leucine-rich repeat 618..641 CDD:275380 7/51 (14%)
leucine-rich repeat 642..689 CDD:275380 11/46 (24%)
LRRCT 679..736 CDD:214507 10/33 (30%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT1G31540NP_001117396.1 PLN03210 1..1156 CDD:215633 169/804 (21%)
leucine-rich repeat 583..606 CDD:275380 7/41 (17%)
leucine-rich repeat 607..629 CDD:275380 7/24 (29%)
leucine-rich repeat 630..652 CDD:275380 4/22 (18%)
leucine-rich repeat 653..676 CDD:275380 8/22 (36%)
leucine-rich repeat 677..699 CDD:275380 7/23 (30%)
leucine-rich repeat 700..720 CDD:275380 7/51 (14%)
leucine-rich repeat 721..775 CDD:275380 12/57 (21%)
leucine-rich repeat 776..799 CDD:275380 11/23 (48%)
leucine-rich repeat 800..833 CDD:275380 5/32 (16%)
leucine-rich repeat 834..866 CDD:275380 10/34 (29%)
leucine-rich repeat 867..901 CDD:275380 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

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