DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and HSL1

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_174166.1 Gene:HSL1 / 839742 AraportID:AT1G28440 Length:996 Species:Arabidopsis thaliana


Alignment Length:619 Identity:162/619 - (26%)
Similarity:248/619 - (40%) Gaps:149/619 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LKELSELHLGDNNIRQ-LPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVS 207
            |..|:.|.|.:|:|.. ||..: .:..|||.|:|:||             |..|......     
plant    83 LSNLAHLSLYNNSINSTLPLNI-AACKSLQTLDLSQN-------------LLTGELPQTL----- 128

  Fly   208 GGSELQT---LDVSFNELR-SLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISY 268
              :::.|   ||::.|... .:|.::|  :...|:.|||.:|.:....|..|..:|:|::||:||
plant   129 --ADIPTLVHLDLTGNNFSGDIPASFG--KFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSY 189

  Fly   269 NHL--VSLPSEAFAGNKE------LRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVD 325
            |..  ..:|.|  .||..      |.|.||.|    ::|.. |.:|.:|:.|||:.|.|..|  .
plant   190 NPFSPSRIPPE--FGNLTNLEVMWLTECHLVG----QIPDS-LGQLSKLVDLDLALNDLVGH--I 245

  Fly   326 NSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSI-GHI-EEGAFLPLYNLHTLNL 388
            ..:..||..::.:.|.||:||.........|..|::||...|.: |.| :|...:|   |.:|||
plant   246 PPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP---LESLNL 307

  Fly   389 AENRL-----------------HTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDL 436
            .||.|                 ....||:..||  ...|.||               |.|:.||:
plant   308 YENNLEGELPASIALSPNLYEIRIFGNRLTGGL--PKDLGLN---------------SPLRWLDV 355

  Fly   437 SSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI-GNITVGMFQDL 499
            |.|:.: ::|..:.....|:.|.:..|..|.....:..:...||.:||..||. |::..| |..|
plant   356 SENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCRSLTRIRLAYNRFSGSVPTG-FWGL 419

  Fly   500 PRLSVLNLAKNRIQSIERGAFDKN----TEIEAIRLDKN-FLTDINGIFATLASLLWLNLSENHL 559
            |.:::|.|..|...    |...|:    :.:..:.|..| |...:.....:|.:|..|:.|.|..
plant   420 PHVNLLELVNNSFS----GEISKSIGGASNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKF 480

  Fly   560 VWFDYAFIPSNLK------WLDIHGNYI-----EALGNYYKLQEEIRVTTLDASHNRIT-----E 608
                ...:|.:|.      .||:|||..     ..:.::.||.|      |:.:.|..|     |
plant   481 ----SGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNE------LNLADNEFTGKIPDE 535

  Fly   609 IGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALR-VAPVSAEKPVP 672
            ||::||.|.::|           ..|.|..|..::...|..|.|: :|.|.|. ..|.|..|.:.
plant   536 IGSLSVLNYLDL-----------SGNMFSGKIPVSLQSLKLNQLN-LSYNRLSGDLPPSLAKDMY 588

  Fly   673 EFYLGGNPFECD-----CSME---------WLQR 692
            :....|||..|.     |..|         ||.|
plant   589 KNSFIGNPGLCGDIKGLCGSENEAKKRGYVWLLR 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697 15/37 (41%)
leucine-rich repeat 116..146 CDD:275380 1/1 (100%)
leucine-rich repeat 147..170 CDD:275380 7/23 (30%)
leucine-rich repeat 171..201 CDD:275380 8/29 (28%)
LRR 210..592 CDD:443914 113/430 (26%)
leucine-rich repeat 212..236 CDD:275380 6/27 (22%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 10/24 (42%)
leucine-rich repeat 285..308 CDD:275380 8/22 (36%)
leucine-rich repeat 309..334 CDD:275380 9/24 (38%)
leucine-rich repeat 335..358 CDD:275380 6/22 (27%)
leucine-rich repeat 359..382 CDD:275380 8/24 (33%)
leucine-rich repeat 383..406 CDD:275380 11/39 (28%)
leucine-rich repeat 407..430 CDD:275380 3/22 (14%)
leucine-rich repeat 431..451 CDD:275380 6/20 (30%)
leucine-rich repeat 454..477 CDD:275380 4/22 (18%)
leucine-rich repeat 478..499 CDD:275380 9/21 (43%)
leucine-rich repeat 502..525 CDD:275380 5/26 (19%)
leucine-rich repeat 526..548 CDD:275380 4/22 (18%)
leucine-rich repeat 590..617 CDD:275380 10/31 (32%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 15/61 (25%)
LRRCT 679..736 CDD:214507 8/28 (29%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
HSL1NP_174166.1 PLN00113 22..960 CDD:215061 162/619 (26%)
leucine-rich repeat 62..85 CDD:275380 1/1 (100%)
leucine-rich repeat 86..109 CDD:275380 7/23 (30%)
leucine-rich repeat 110..133 CDD:275380 8/42 (19%)
leucine-rich repeat 134..157 CDD:275380 5/24 (21%)
leucine-rich repeat 158..181 CDD:275380 7/22 (32%)
leucine-rich repeat 182..206 CDD:275380 10/25 (40%)
leucine-rich repeat 207..230 CDD:275380 8/27 (30%)
leucine-rich repeat 231..254 CDD:275380 9/24 (38%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..300 CDD:275380 7/20 (35%)
leucine-rich repeat 302..325 CDD:275380 7/22 (32%)
leucine-rich repeat 326..344 CDD:275380 4/19 (21%)
leucine-rich repeat 350..370 CDD:275380 6/19 (32%)
leucine-rich repeat 374..397 CDD:275380 4/22 (18%)
leucine-rich repeat 398..421 CDD:275380 10/23 (43%)
leucine-rich repeat 422..445 CDD:275380 5/26 (19%)
leucine-rich repeat 446..469 CDD:275380 4/22 (18%)
leucine-rich repeat 470..493 CDD:275380 6/26 (23%)
leucine-rich repeat 494..517 CDD:275380 5/22 (23%)
leucine-rich repeat 518..541 CDD:275380 8/28 (29%)
leucine-rich repeat 542..564 CDD:275380 5/32 (16%)
leucine-rich repeat 565..584 CDD:275380 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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