DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and RLP1

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001154318.1 Gene:RLP1 / 837251 AraportID:AT1G07390 Length:1083 Species:Arabidopsis thaliana


Alignment Length:1113 Identity:244/1113 - (21%)
Similarity:389/1113 - (34%) Gaps:382/1113 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HAQQQCNWQYGLTTMDIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQELLHASELAPGLFRQL 89
            |....|.|:      .::||........|..||..|..|........:..|||:       |.||
plant    33 HEGDCCRWE------RVKCSDAINGHVIGLSLDRLVPVAFESQTRSLNLSLLHS-------FPQL 84

  Fly    90 QKL------------------SELRIDACKLQRVPPNAFEGLM--------SLKRLTLESH--NA 126
            |.|                  |...:|.........|.|:..:        |::.|.|||:  ..
plant    85 QSLNLSWNWFTNLSDHFLGFKSFGTLDKLTTLDFSHNMFDNSIVPFLNAATSIRSLHLESNYMEG 149

  Fly   127 VWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSE 191
            |:.|        |....:..|..|:|.||:...|..........|::|:|:.|.:..:|      
plant   150 VFPP--------QELSNMTNLRVLNLKDNSFSFLSSQGLTDFRDLEVLDLSFNGVNDSE------ 200

  Fly   192 KLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNIS-TLAPNAL 255
               |..:||.|        :|:|||::||.|.......|...|:.||.|.|:.|..: ||:.:.|
plant   201 ---ASHSLSTA--------KLKTLDLNFNPLSDFSQLKGLESLQELQVLKLRGNKFNHTLSTHVL 254

  Fly   256 AGLSSLRVLNISYNHLVSLP---------SEAFAGNKEL----------------------RELH 289
            ..|..|:.|::|.|...:|.         ||.....:|:                      :.:.
plant   255 KDLKMLQELDLSDNGFTNLDHGRDVDESRSEKRFDFREVVQKVETLWIGLRLSFQMSITHHKSVT 319

  Fly   290 LQGNDL--YELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTR----I 348
            :.||..  .|:|       ..|.|||...|||:..|........|::|..|:||:||||.    :
plant   320 VGGNGFLGLEIP-------TSLQVLDFKRNQLSLTHEGYLGICRLMKLRELDLSSNALTSLPYCL 377

  Fly   349 GSKTFKELYFLQILDMRNNSI-GHIEEGAF---LPLYNLHTLNLAENRLHTLDNRIFNGLYVLTK 409
            |:.|     .|:.||:.||.: |::  .:|   ||.. |..|:|.:|...  .:.:||.|...|:
plant   378 GNLT-----HLRTLDLSNNQLNGNL--SSFVSGLPSV-LEYLSLLDNNFD--GSFLFNSLVNQTR 432

  Fly   410 LTL--NNNLVSIVESQA--------------FRNCS-------------DLKELDLSSNQLT--- 442
            ||:  .::.|.:::.|.              ..|||             ||..:|||.|:||   
plant   433 LTVFKLSSKVGVIQVQTESSWAPLFQLKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKLTGTF 497

  Fly   443 ------------------------EVPEAVQDLSMLKTLDLGENQISE----------------- 466
                                    ::|..|..   |:.||:..|.|.:                 
plant   498 PTWLVKNNTRLQTILLSGNSLTKLQLPILVHG---LQVLDISSNMIYDSIQEDIGMVFPNLRFMN 559

  Fly   467 FKNNTFR-----NLNQLTGLRLIDNRIGNITVGMFQDLP--------RLSVLNLAKNRIQSIERG 518
            |.:|.|:     ::.::..|:::|..    :.|::..||        .|.||.|:.|::|.   .
plant   560 FSSNHFQGTIPSSIGEMKSLQVLDMS----SNGLYGQLPIMFLSGCYSLRVLKLSNNQLQG---K 617

  Fly   519 AFDKN---TEIEAIRLD-KNFLTDINGIFATLASLLWLNLSENHL-----VWFDYAFIPSNLKWL 574
            .|.|:   |.:..:.|| .||...:........:|..|::|:|..     :|....   |.|.:|
plant   618 IFSKHANLTGLVGLFLDGNNFTGSLEEGLLKSKNLTLLDISDNRFSGMLPLWIGRI---SRLSYL 679

  Fly   575 DIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSI------ELLFINNNIIGQIQA 633
            .:.||.::  |.:..|::...|..:|.|||..:.    |:|.::      ||...||...|.:..
plant   680 YMSGNQLK--GPFPFLRQSPWVEVMDISHNSFSG----SIPRNVNFPSLRELRLQNNEFTGLVPG 738

  Fly   634 NTF----------------------VDKTRLARVDLYAN------------VLSKISLNALRVAP 664
            |.|                      :|:|...|:.|..|            .||::.|  |.::.
plant   739 NLFKAAGLEVLDLRNNNFSGKILNTIDQTSKLRILLLRNNSFQTYIPGKICQLSEVGL--LDLSH 801

  Fly   665 VSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLG-NIECLMPHSRSAPLRPLASL 728
            .....|:|         .|...|.:....|:.|...   |.|.. :....:||            
plant   802 NQFRGPIP---------SCFSKMSFGAEQNDRTMSL---VADFDFSYITFLPH------------ 842

  Fly   729 SASDFVCKYESHC-------------PPT----CHCCEYEQCECEVICPGNCSCFHDATWATNIV 776
                  |:|.||.             |.|    .....||..:.:::     ...|....::|  
plant   843 ------CQYGSHLNLDDGVRNGYQPKPATVVDFLTKSRYEAYQGDIL-----RYMHGLDLSSN-- 894

  Fly   777 DCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVN 841
                    .|...||.::.||                  :|:|:|.|:::.|......|:::|..
plant   895 --------ELSGEIPIEIGDL------------------QNIRSLNLSSNRLTGSIPDSISKLKG 933

  Fly   842 LRVLHLENNKLTALEGT------EFRSLGLLRELYLHNNMLTHI----SNATFEPLVSLEVLRLD 896
            |..|.|.|||   |:|:      :..|||.|...|  ||:...|    ...||:     |...:.
plant   934 LESLDLSNNK---LDGSIPPALADLNSLGYLNISY--NNLSGEIPFKGHLVTFD-----ERSYIG 988

  Fly   897 NNRLSSLP 904
            |..|..||
plant   989 NAHLCGLP 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 6/24 (25%)
leucine-rich repeat 92..115 CDD:275380 5/48 (10%)
LRR_8 115..181 CDD:404697 18/67 (27%)
leucine-rich repeat 116..146 CDD:275380 7/31 (23%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..201 CDD:275380 7/29 (24%)
LRR 210..592 CDD:443914 121/518 (23%)
leucine-rich repeat 212..236 CDD:275380 9/23 (39%)
leucine-rich repeat 237..260 CDD:275380 9/23 (39%)
leucine-rich repeat 261..284 CDD:275380 7/31 (23%)
leucine-rich repeat 285..308 CDD:275380 4/46 (9%)
leucine-rich repeat 309..334 CDD:275380 9/24 (38%)
leucine-rich repeat 335..358 CDD:275380 10/26 (38%)
leucine-rich repeat 359..382 CDD:275380 9/26 (35%)
leucine-rich repeat 383..406 CDD:275380 7/22 (32%)
leucine-rich repeat 407..430 CDD:275380 8/51 (16%)
leucine-rich repeat 431..451 CDD:275380 9/46 (20%)
leucine-rich repeat 454..477 CDD:275380 8/44 (18%)
leucine-rich repeat 478..499 CDD:275380 3/20 (15%)
leucine-rich repeat 502..525 CDD:275380 8/25 (32%)
leucine-rich repeat 526..548 CDD:275380 4/22 (18%)
leucine-rich repeat 590..617 CDD:275380 8/26 (31%)
leucine-rich repeat 618..641 CDD:275380 8/50 (16%)
leucine-rich repeat 642..689 CDD:275380 11/58 (19%)
LRRCT 679..736 CDD:214507 8/57 (14%)
LRR <775..>920 CDD:443914 35/140 (25%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
leucine-rich repeat 797..817 CDD:275380 1/19 (5%)
leucine-rich repeat 818..841 CDD:275380 6/22 (27%)
leucine-rich repeat 842..865 CDD:275380 10/28 (36%)
leucine-rich repeat 866..889 CDD:275380 7/26 (27%)
leucine-rich repeat 890..911 CDD:275380 5/15 (33%)
TIR 1045..1183 CDD:214587
RLP1NP_001154318.1 PLN00113 24..>714 CDD:215061 172/754 (23%)
leucine-rich repeat 84..112 CDD:275380 4/27 (15%)
leucine-rich repeat 113..136 CDD:275380 2/22 (9%)
leucine-rich repeat 137..161 CDD:275380 7/31 (23%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
leucine-rich repeat 186..209 CDD:275380 9/39 (23%)
leucine-rich repeat 210..231 CDD:275380 8/20 (40%)
leucine-rich repeat 232..259 CDD:275380 10/26 (38%)
leucine-rich repeat 260..333 CDD:275380 12/79 (15%)
leucine-rich repeat 334..359 CDD:275380 9/24 (38%)
leucine-rich repeat 360..382 CDD:275380 10/26 (38%)
leucine-rich repeat 408..429 CDD:275380 7/22 (32%)
leucine-rich repeat 433..455 CDD:275380 4/21 (19%)
leucine-rich repeat 459..482 CDD:275380 3/22 (14%)
leucine-rich repeat 483..507 CDD:275380 7/23 (30%)
PLN00113 486..>1057 CDD:215061 124/605 (20%)
leucine-rich repeat 508..529 CDD:275380 2/20 (10%)
leucine-rich repeat 530..554 CDD:275380 5/23 (22%)
leucine-rich repeat 555..578 CDD:275380 3/22 (14%)
leucine-rich repeat 579..603 CDD:275380 5/27 (19%)
leucine-rich repeat 604..651 CDD:275380 13/49 (27%)
leucine-rich repeat 652..675 CDD:275380 5/25 (20%)
leucine-rich repeat 676..721 CDD:275380 13/50 (26%)
leucine-rich repeat 722..745 CDD:275380 7/22 (32%)
leucine-rich repeat 746..769 CDD:275380 2/22 (9%)
leucine-rich repeat 770..791 CDD:275380 3/20 (15%)
leucine-rich repeat 794..815 CDD:275380 5/31 (16%)
leucine-rich repeat 883..909 CDD:275380 7/58 (12%)
leucine-rich repeat 910..933 CDD:275380 6/22 (27%)
leucine-rich repeat 934..957 CDD:275380 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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