DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT5G49140

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_199725.1 Gene:AT5G49140 / 834973 AraportID:AT5G49140 Length:980 Species:Arabidopsis thaliana


Alignment Length:689 Identity:146/689 - (21%)
Similarity:245/689 - (35%) Gaps:262/689 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 KLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVW 165
            ||...|.|.||.::.     :|||         :|         |.:..|.|.|:::|.:  |:|
plant   174 KLNGTPSNDFENIIG-----IESH---------ME---------KMVQLLCLNDDDVRMV--GIW 213

  Fly   166 CSMPSLQLLNLTQNRIRSAEFLG-FSEKLCAGSALSNANGAVSGGSE--LQT------LDVSFNE 221
               ....:...|..|:..:.|.| |...:...:...|....|..|.|  ||.      |.:.||:
plant   214 ---GPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQRIVDSGGEYNLQARLQKEFLPIIFNQ 275

  Fly   222 L-RSLPDAWG-ASRLR------------RLQTLSLQHNNISTLAPNA--LAGLSSLRVL---NIS 267
            . |.:...|. ..||:            :::.|....|......|.:  :......::|   .|:
plant   276 KDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEALANETRWFGPGSRIIVTTKDKQILVGHEIN 340

  Fly   268 YNHLVSLPSE----------AFAGN----------KELREL-------------HLQG--NDLYE 297
            :.:.|.||..          ||..|          .|:.||             |::|  .|.::
plant   341 HIYEVKLPCRKTALEILCLYAFKQNVAPDDFMDVVVEVAELSGHLPLGLRVLGSHMRGKSKDRWK 405

  Fly   298 LPKGLL-----HRLEQLLV-------------------------LDLSGNQLTSHHVDNSTFAGL 332
            |..|.|     .::|::|.                         :||....|.:..:|.|....|
plant   406 LELGRLTTSLDEKVEKILKISYDDLHIRDKALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQL 470

  Fly   333 I-----------RLIVLN---------------------------------LSNNALTR------ 347
            :           |.||::                                 ||||..:.      
plant   471 LLDKSLIQINDDREIVMHSLLLKMGKEVVCQHSSEPGKRQFLFNTKETCNILSNNTGSEAVLGIS 535

  Fly   348 -----------IGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLN-LAENRLHTLDNRI 400
                       :..:.|:::..|:.|...|..   |:|...|.|:....|| |...||...|:  
plant   536 LDTSEIQNDVFMSERVFEDMRNLKFLRFYNKK---IDENPSLKLHLPRGLNYLPAVRLLHWDS-- 595

  Fly   401 FNGLYV--------LTKL-TLNNNLVSIVESQAFRNCSDLKELDLS-SNQLTEVPEAVQDLSMLK 455
            :...|:        |.:| .:::.:|.:.|..  :..:.||.:||| ||.|.|||:..:.:| |:
plant   596 YPMKYIPSQFRPECLVELRMMHSKVVKLWEGT--QTLAYLKTIDLSFSNNLVEVPDLSKAIS-LE 657

  Fly   456 TLDL-GENQISEFKNNTFRNLNQLTGLRL-IDNRIGNITVGMFQDLPRLSVL------------N 506
            ||.| |...::|..::.. ||::|..||| :..::..|.:.:  :|..|.||            :
plant   658 TLCLEGCQSLAELPSSVL-NLHRLKWLRLTMCEKLEVIPLHI--NLASLEVLDMEGCLKLKSFPD 719

  Fly   507 LAKNRIQSIERGAFDKNTEIEAI--------RLDKNFLTDING-----IFATL-ASLLWLNLSEN 557
            ::||    ||| .|.|||.||.|        ||:.   .||:|     ||:.: .|::::.|:::
plant   720 ISKN----IER-IFMKNTGIEEIPPSISQWSRLES---LDISGCLNLKIFSHVPKSVVYIYLTDS 776

  Fly   558 ----------HLVWFDYAFI------------PSNLKWL 574
                      .|.|..|.::            ||::|.|
plant   777 GIERLPDCIKDLTWLHYLYVDNCRKLVSLPELPSSIKIL 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 6/13 (46%)
LRR_8 115..181 CDD:404697 12/65 (18%)
leucine-rich repeat 116..146 CDD:275380 4/29 (14%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..201 CDD:275380 5/30 (17%)
LRR 210..592 CDD:443914 121/579 (21%)
leucine-rich repeat 212..236 CDD:275380 9/43 (21%)
leucine-rich repeat 237..260 CDD:275380 3/24 (13%)
leucine-rich repeat 261..284 CDD:275380 8/45 (18%)
leucine-rich repeat 285..308 CDD:275380 8/42 (19%)
leucine-rich repeat 309..334 CDD:275380 7/60 (12%)
leucine-rich repeat 335..358 CDD:275380 7/72 (10%)
leucine-rich repeat 359..382 CDD:275380 7/22 (32%)
leucine-rich repeat 383..406 CDD:275380 6/23 (26%)
leucine-rich repeat 407..430 CDD:275380 4/23 (17%)
leucine-rich repeat 431..451 CDD:275380 11/20 (55%)
leucine-rich repeat 454..477 CDD:275380 8/23 (35%)
leucine-rich repeat 478..499 CDD:275380 5/21 (24%)
leucine-rich repeat 502..525 CDD:275380 11/34 (32%)
leucine-rich repeat 526..548 CDD:275380 10/35 (29%)
leucine-rich repeat 590..617 CDD:275380
leucine-rich repeat 618..641 CDD:275380
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT5G49140NP_199725.1 PLN03210 13..979 CDD:215633 146/689 (21%)
leucine-rich repeat 558..587 CDD:275380 10/31 (32%)
leucine-rich repeat 588..609 CDD:275380 4/22 (18%)
leucine-rich repeat 610..629 CDD:275380 4/20 (20%)
leucine-rich repeat 633..655 CDD:275380 11/21 (52%)
leucine-rich repeat 656..679 CDD:275380 8/23 (35%)
leucine-rich repeat 680..702 CDD:275380 6/23 (26%)
leucine-rich repeat 703..723 CDD:275380 3/19 (16%)
leucine-rich repeat 724..746 CDD:275380 10/22 (45%)
leucine-rich repeat 747..767 CDD:275380 6/22 (27%)
leucine-rich repeat 768..790 CDD:275380 2/21 (10%)
Blue background indicates that the domain is not in the aligned region.

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