DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT5G46510

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_199463.1 Gene:AT5G46510 / 834694 AraportID:AT5G46510 Length:1353 Species:Arabidopsis thaliana


Alignment Length:918 Identity:180/918 - (19%)
Similarity:318/918 - (34%) Gaps:280/918 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PPNAFEGLMSLKRLTLESHNAVWGPGKT---LELHGQSFQGLKELSELHLGDNNIRQLPEGVWCS 167
            ||..||.|:.         ...|..|..   |.:.|.:.:|.|                :..|..
plant   366 PPEGFEELVV---------EIAWLAGSLPLGLTVFGSALRGRK----------------KEYWVK 405

  Fly   168 M-PSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGA 231
            | |.||                           ::.:|.:.     :||.||::.:.::.|    
plant   406 MLPRLQ---------------------------NDLDGNIE-----ETLKVSYDAIGNVKD---- 434

  Fly   232 SRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLY 296
            ..|.||  ::...|::.......|...|.|.| ||:..:||         :|.|  :|:: ||..
plant   435 QALFRL--IACLFNHVKVRDIELLLADSGLDV-NIALENLV---------DKSL--IHVR-NDHV 484

  Fly   297 ELPKGLLHRLEQLLVLDLSGNQLTSHHVDN-----------------STFAGLIRLIVLNLSNNA 344
            |     :|||.|    :...|.:.|...||                 |...|..:::.::|..:.
plant   485 E-----MHRLLQ----ETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSK 540

  Fly   345 LTR--IGSKTFKELYFLQILDMRNNSIGHIEEGAFLP----LYNLHTLNLAENRLHTLDNRIFNG 403
            ::.  :....||.:..|..||:.:.:....|....||    .|::....|..:|. .|....:..
plant   541 VSEFCVHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRF-PLKCMPYTF 604

  Fly   404 LYVLTKLTLNNN-LVSIVESQAFRNCSDLKELDL-SSNQLTEVPEAVQDLSM---LKTLDLGENQ 463
            |..|.||.:::: |..:.|......|  |||||: :|..|.|:|    |||.   ::.||.|...
plant   605 LRNLVKLEMHDSKLEKLWEGAMSFTC--LKELDMWASKYLKEIP----DLSKATNIEKLDFGHCW 663

  Fly   464 ISEFKNNTFRNLNQLTGLRL-IDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIE 527
            ......::.||||:|..|.: ....:..:..|.  :|..|..||.                .|..
plant   664 SLVELPSSIRNLNKLLELNMEYCGELETLPTGF--NLKSLDYLNF----------------NECW 710

  Fly   528 AIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQE 592
            .:|....|.|:|:.:.          |:|..:..:     ||||               |:|...
plant   711 KLRTFPEFATNISNLI----------LAETSIEEY-----PSNL---------------YFKNVR 745

  Fly   593 EIRVTTLDASHNR--------------ITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLA 643
            |:.:...|:..|:              :|.:...::||.:||            :::|.:...|.
plant   746 ELSMGKADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVEL------------SSSFQNLNNLE 798

  Fly   644 RVDL-YANVLSKI-------SLNALRVAPVSAEKPVPEFYLGGNPFECDCS----MEW-LQRINN 695
            |:|: |...|..:       ||.:|.:...|..|..|:........:.|.:    :.| ::...|
plant   799 RLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFN 863

  Fly   696 LTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCE---CEV 757
            ||...   :.....::|:  ......|:.|..:|.|:  |...:....:|:....|..:   .::
plant   864 LTKLT---MKGCRELKCV--SLNIFKLKHLGEVSFSN--CGALTRVDLSCYPSGVEMMKADNADI 921

  Fly   758 ICPGNCSCFHDA-TWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRAL 821
            :.....|...|: ....|.:||...|...:.::.....:.:.|.|..:|    .:.|.|.:....
plant   922 VSEETTSSLPDSCVLNVNFMDCVNLDREPVLHQQSIIFNSMILPGEEVP----SYFTYRTSDSQP 982

  Fly   822 YLNASNL-MTLQNGSLAQ-LVNLRVLHLEN----------NKLTALEGTEFRSLGLLREL----- 869
            :..:|:| :.|....|:| ....||..:.:          ::.....|.:|.|.|.|.:.     
plant   983 FGTSSSLPIPLLPTQLSQPFFRFRVCAVVSASNGVYIGVYSRFKGRIGNKFDSFGELHKFMEIEK 1047

  Fly   870 ------------------------YLHNNMLTHISNATFEPLVSLEV--LRL------DNNRL-- 900
                                    |.|.::..||::..:...|.|:.  :||      ..|||  
plant  1048 GIHLCIFDCRIRLYKDNVPLSQLNYDHVDINIHITSGDWRSTVVLKEWGIRLLEDCSSAENRLGN 1112

  Fly   901 --SSLPHL 906
              |:|||:
plant  1113 PNSTLPHV 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 5/8 (63%)
LRR_8 115..181 CDD:404697 11/69 (16%)
leucine-rich repeat 116..146 CDD:275380 5/32 (16%)
leucine-rich repeat 147..170 CDD:275380 2/23 (9%)
leucine-rich repeat 171..201 CDD:275380 2/29 (7%)
LRR 210..592 CDD:443914 92/410 (22%)
leucine-rich repeat 212..236 CDD:275380 6/23 (26%)
leucine-rich repeat 237..260 CDD:275380 3/22 (14%)
leucine-rich repeat 261..284 CDD:275380 6/22 (27%)
leucine-rich repeat 285..308 CDD:275380 8/22 (36%)
leucine-rich repeat 309..334 CDD:275380 6/41 (15%)
leucine-rich repeat 335..358 CDD:275380 3/24 (13%)
leucine-rich repeat 359..382 CDD:275380 6/26 (23%)
leucine-rich repeat 383..406 CDD:275380 4/22 (18%)
leucine-rich repeat 407..430 CDD:275380 6/23 (26%)
leucine-rich repeat 431..451 CDD:275380 9/20 (45%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 3/21 (14%)
leucine-rich repeat 502..525 CDD:275380 3/22 (14%)
leucine-rich repeat 526..548 CDD:275380 4/21 (19%)
leucine-rich repeat 590..617 CDD:275380 5/40 (13%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 12/58 (21%)
LRRCT 679..736 CDD:214507 10/61 (16%)
LRR <775..>920 CDD:443914 35/185 (19%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
leucine-rich repeat 797..817 CDD:275380 5/19 (26%)
leucine-rich repeat 818..841 CDD:275380 5/24 (21%)
leucine-rich repeat 842..865 CDD:275380 5/32 (16%)
leucine-rich repeat 866..889 CDD:275380 5/51 (10%)
leucine-rich repeat 890..911 CDD:275380 10/29 (34%)
TIR 1045..1183 CDD:214587
AT5G46510NP_199463.1 PLN03210 2..1165 CDD:215633 180/918 (20%)
leucine-rich repeat 557..586 CDD:275380 7/28 (25%)
leucine-rich repeat 587..607 CDD:275380 4/20 (20%)
leucine-rich repeat 608..630 CDD:275380 5/21 (24%)
leucine-rich repeat 631..653 CDD:275380 12/25 (48%)
leucine-rich repeat 655..677 CDD:275380 6/21 (29%)
leucine-rich repeat 678..700 CDD:275380 4/23 (17%)
leucine-rich repeat 701..721 CDD:275380 6/35 (17%)
leucine-rich repeat 722..743 CDD:275380 8/50 (16%)
leucine-rich repeat 773..796 CDD:275378 6/34 (18%)
leucine-rich repeat 797..819 CDD:275378 5/21 (24%)
leucine-rich repeat 820..840 CDD:275378 5/19 (26%)
leucine-rich repeat 841..866 CDD:275378 4/24 (17%)
leucine-rich repeat 873..898 CDD:275380 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.

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