DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT5G46490

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_974894.1 Gene:AT5G46490 / 834692 AraportID:AT5G46490 Length:858 Species:Arabidopsis thaliana


Alignment Length:729 Identity:149/729 - (20%)
Similarity:250/729 - (34%) Gaps:244/729 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 KRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRI 181
            ||.|.|..|. |....||..:...|...|...|..:    |.::...|      |:.|.||.:: 
plant   125 KRQTEEVKNQ-WKKALTLVANMLGFDSAKWDDEAKM----IEEIANDV------LRKLLLTTSK- 177

  Fly   182 RSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRL------RRLQTL 240
            ...:|:|..:.:...|||               ||:...|:: :...||:|.:      |.|...
plant   178 DFDDFVGLEDHIANMSAL---------------LDLESKEVK-MVGIWGSSGIGKTTIARALFNN 226

  Fly   241 SLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYEL------- 298
            ..:|..:......:.|..|  |.::.|.|     |.:      ...:||||.:.|.|:       
plant   227 LFRHFQVRKFIDRSFAYKS--REIHSSAN-----PDD------HNMKLHLQESFLSEILRMPNIK 278

  Fly   299 ---PKGLLHR------------LEQLLVLDLSGNQ-------------------LTSHHVDN--- 326
               |..|..|            |:.::|||....|                   ||:|.:|:   
plant   279 IDDPTALEERLKYQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLTAHGIDHIYE 343

  Fly   327 ---------------STF------AGLIRLIV------------LNLSNNALTRIGSKTFKELYF 358
                           |.|      .|...|:|            |||....|     :...|.|:
plant   344 VSFPTDVHACQMLCQSAFKQNYAPEGFGDLVVDVVRHACSFPLGLNLLGKYL-----RGRNEEYW 403

  Fly   359 LQILDMRNNSI---GHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNG---LYVLTKLTLNNNLV 417
            :.||....|.:   |.||:          .|.::.:.|.:.|..||..   :::..|:|...:|:
plant   404 MDILPRLENGLRLDGKIEK----------ILRISYDGLDSEDQEIFRHIACIFIHMKVTTIKSLL 458

  Fly   418 S------------------------------------IVESQAFRNCSDLKELDLSSNQLTEVPE 446
            :                                    ||..|:..|..: :|..:..|.:.:|..
plant   459 AESDVSFALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDNPGE-REFLVDPNDIHDVLN 522

  Fly   447 A------VQDLSM----LKTLDLGENQISEFKNNTFRNLNQLTG---LRLID-----------NR 487
            |      |..:|:    :..||:.|:.|....|..|..:.....   ..|||           ||
plant   523 ACTGTQKVLGISLNTRNIVELDVHESAIKGMSNLRFLEIKDFISQWKKALIDVSKIAFDSTEWNR 587

  Fly   488 IGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWL 552
             |.||    |:...|.:|:......:.:. |..|...|: ::...|:|..:.:|:... ||..:|
plant   588 -GLIT----QNYVNLLLLSTTPKEYEELV-GIEDHTAEM-SLPATKSFDFEDDGLHLP-ASFDYL 644

  Fly   553 NLSENHLVW-------FDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTT------LDASHN 604
            ..:...|.|       ..|.|.|.||..|::..:.:      |||.|.:...|      ||.|.|
plant   645 PPTLKLLCWPKFPMRCMPYDFCPENLVKLEMRESKL------YKLWEGVVPLTCLKEMDLDGSVN 703

  Fly   605 RITEIGAMSVPNSIELLFINNNIIGQIQANTFV-DKTRLARVDL-YANVLSKI-------SLNAL 660
             :.||..:|:..::|.|.. .|....::..:|: :..:|.:::: :.|.|..:       ||:.|
plant   704 -LKEIPDLSMATNLETLNF-ENCKSLVELPSFIRNLNKLLKLNMAFCNSLETLPTGFNLKSLDRL 766

  Fly   661 RVAPVSAEKPVPEF 674
            ..:..:..|..|:|
plant   767 SFSECTKLKTFPKF 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697 17/63 (27%)
leucine-rich repeat 116..146 CDD:275380 9/28 (32%)
leucine-rich repeat 147..170 CDD:275380 3/22 (14%)
leucine-rich repeat 171..201 CDD:275380 9/29 (31%)
LRR 210..592 CDD:443914 105/537 (20%)
leucine-rich repeat 212..236 CDD:275380 6/29 (21%)
leucine-rich repeat 237..260 CDD:275380 3/22 (14%)
leucine-rich repeat 261..284 CDD:275380 4/22 (18%)
leucine-rich repeat 285..308 CDD:275380 10/44 (23%)
leucine-rich repeat 309..334 CDD:275380 11/67 (16%)
leucine-rich repeat 335..358 CDD:275380 7/34 (21%)
leucine-rich repeat 359..382 CDD:275380 6/25 (24%)
leucine-rich repeat 383..406 CDD:275380 5/25 (20%)
leucine-rich repeat 407..430 CDD:275380 7/58 (12%)
leucine-rich repeat 431..451 CDD:275380 5/25 (20%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 9/34 (26%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 3/21 (14%)
leucine-rich repeat 590..617 CDD:275380 10/32 (31%)
leucine-rich repeat 618..641 CDD:275380 4/23 (17%)
leucine-rich repeat 642..689 CDD:275380 9/41 (22%)
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT5G46490NP_974894.1 PLN03210 1..>835 CDD:215633 149/729 (20%)
leucine-rich repeat 706..736 CDD:275383 7/30 (23%)
leucine-rich repeat 737..762 CDD:275383 3/24 (13%)
leucine-rich repeat 763..783 CDD:275383 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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