DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT5G46270

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001330138.1 Gene:AT5G46270 / 834669 AraportID:AT5G46270 Length:1145 Species:Arabidopsis thaliana


Alignment Length:666 Identity:143/666 - (21%)
Similarity:233/666 - (34%) Gaps:196/666 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQELLHASELAPGLFRQLQKLSELRIDACKLQR- 104
            |.|....:|..|.|.|...:....|..:| ..:.::|.......:.|.||::....:....:.: 
plant   452 IACLFNHMEVTTITSLLTDLGINIGLKNL-VDKSIIHVRRGCVEMHRMLQEMGRKIVRTQSIDKP 515

  Fly   105 ------VPPNAF-----EGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIR 158
                  |.||..     ||:.:.|.|.:..:.   |....|.:|..:|:|:..|..|.:...|..
plant   516 GKREFLVDPNDISDVLSEGIGTQKVLGISLNT---GEIDELYVHESAFKGMSNLRFLEIDSKNFG 577

  Fly   159 Q-----LPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVS 218
            :     |||.:....|.|:||......:|           |..|.....|        |.||.:.
plant   578 KAGRLYLPESLDYLPPRLKLLCWPNFPMR-----------CMPSNFRPEN--------LVTLKMP 623

  Fly   219 FNELRSL------------PDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISY-NH 270
            .::|..|            .|..|:|.|:.:..||:..|               |.:|.:.: ..
plant   624 NSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTN---------------LEILKLGFCKS 673

  Fly   271 LVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRL 335
            ||.|||       .:|.|    |.|.:|.....|.||   :|....|..:..|: |..:...:| 
plant   674 LVELPS-------SIRNL----NKLLKLDMEFCHSLE---ILPTGFNLKSLDHL-NFRYCSELR- 722

  Fly   336 IVLNLSNNALTRIGSKTFKELYFLQILDMRNNSI-----GHIEEGAFLPLYNLHTLNLAENRLHT 395
                            ||.|.       ..|.|:     .:|||  |..|.||..|:|::..   
plant   723 ----------------TFPEF-------STNISVLMLFGTNIEE--FPNLENLVELSLSKEE--- 759

  Fly   396 LDNRIFNGLYVLTKL------TLNN----NLVSIVE-SQAFRNCSDLKELDLS------------ 437
            .|.:.::|:..||..      ||.:    |:.|:|| ..:|:|.:.||||.::            
plant   760 SDGKQWDGVKPLTPFLEMLSPTLKSLKLENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGI 824

  Fly   438 ------------SNQLTEVPEAVQDLSMLKTLDLGEN----QISEFKN---NTFRNLNQLTGLRL 483
                        .:||...||...::|:|...:.|..    ||..|.|   .|.|:.::|..|.|
plant   825 NLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSL 889

  Fly   484 IDNRIGNITVGMFQDLPRLSVLN--------LAKNRIQSIE-----RGAFDKNTEI----EAI-- 529
            ...::..:....|.|...|:|:|        |::....|::     ||.|..:.|.    |::  
plant   890 NIPKMKTLWDVDFSDCAALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPETVLHQESVIF 954

  Fly   530 --------RLDKNFLTDINGIFATLAS--LLWLNLSENHLVW--------FDYAFIPSNLKWLDI 576
                    ::...|.....|....|.:  ||...||:....:        |:...|..|.::...
plant   955 NSMAFPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRVCAVATAFNIVSIQVNSRFTGR 1019

  Fly   577 HGNYIEALGNYYKLQE 592
            .||..:..|..::|.|
plant  1020 FGNSFDFFGEGHELME 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 4/24 (17%)
leucine-rich repeat 92..115 CDD:275380 5/34 (15%)
LRR_8 115..181 CDD:404697 17/70 (24%)
leucine-rich repeat 116..146 CDD:275380 7/29 (24%)
leucine-rich repeat 147..170 CDD:275380 6/27 (22%)
leucine-rich repeat 171..201 CDD:275380 6/29 (21%)
LRR 210..592 CDD:443914 104/478 (22%)
leucine-rich repeat 212..236 CDD:275380 9/35 (26%)
leucine-rich repeat 237..260 CDD:275380 3/22 (14%)
leucine-rich repeat 261..284 CDD:275380 7/23 (30%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 4/24 (17%)
leucine-rich repeat 335..358 CDD:275380 3/22 (14%)
leucine-rich repeat 359..382 CDD:275380 7/27 (26%)
leucine-rich repeat 383..406 CDD:275380 5/22 (23%)
leucine-rich repeat 407..430 CDD:275380 10/33 (30%)
leucine-rich repeat 431..451 CDD:275380 8/43 (19%)
leucine-rich repeat 454..477 CDD:275380 8/29 (28%)
leucine-rich repeat 478..499 CDD:275380 4/20 (20%)
leucine-rich repeat 502..525 CDD:275380 8/35 (23%)
leucine-rich repeat 526..548 CDD:275380 4/35 (11%)
leucine-rich repeat 590..617 CDD:275380 2/3 (67%)
leucine-rich repeat 618..641 CDD:275380
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT5G46270NP_001330138.1 PLN03210 12..1138 CDD:215633 143/666 (21%)
leucine-rich repeat 617..639 CDD:275380 5/21 (24%)
leucine-rich repeat 640..656 CDD:275380 4/15 (27%)
leucine-rich repeat 663..686 CDD:275380 9/33 (27%)
leucine-rich repeat 687..709 CDD:275380 7/24 (29%)
leucine-rich repeat 710..730 CDD:275380 6/44 (14%)
leucine-rich repeat 750..781 CDD:275380 7/33 (21%)
leucine-rich repeat 782..805 CDD:275380 7/22 (32%)
leucine-rich repeat 806..828 CDD:275380 4/21 (19%)
leucine-rich repeat 840..875 CDD:275378 10/34 (29%)
leucine-rich repeat 876..907 CDD:275378 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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