DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT5G41540

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_198969.1 Gene:AT5G41540 / 834156 AraportID:AT5G41540 Length:1038 Species:Arabidopsis thaliana


Alignment Length:1011 Identity:195/1011 - (19%)
Similarity:346/1011 - (34%) Gaps:309/1011 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 AFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKE--LSELHLGDNNIRQLPEGVWC----- 166
            |.:|:::.|...:|....: ||        :..|.::|  :|.:.|..|    .|...||     
plant    35 AIKGIVAFKDQEIERGQRI-GP--------ELVQAIRESRVSLVVLSKN----YPSSSWCLDELV 86

  Fly   167 ------------SMPSLQLLNLTQNRIRSAEFLGFSEKLCAG----------SALSNANGAVSGG 209
                        .||....::.:..|.:|.:|.....|.|.|          :||:.|  |..||
plant    87 EILKCKEDQEQIVMPIFYEIDPSDVRKQSGDFGKAFGKTCVGKTKEVKQRWTNALTEA--ANIGG 149

  Fly   210 S------------ELQTLDVSFNELRSLP----------DAWGASRLRRLQT-LSLQHNNISTLA 251
            .            |....||| |:|..:|          ||    .||:|.: |.|..:.:..:.
plant   150 EHSLNWTDEAEMIEKIVADVS-NKLNVIPSRDFEEMVGLDA----HLRKLDSLLCLNSDEVKMIG 209

  Fly   252 PNALAGLSSLRVLNISYNHL-VSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLS 315
            ....||:....:....||.| .:...:.|.||       |:|:  |:                  
plant   210 IWGPAGIGKTTIARALYNQLSTNFQFKCFMGN-------LKGS--YK------------------ 247

  Fly   316 GNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHI-----EEG 375
                 |..|||..:.       |||.|..|::|          |...|::.:.:|.|     ::.
plant   248 -----SIGVDNYDWK-------LNLQNQLLSKI----------LNQNDVKTDHLGGIKDWLEDKK 290

  Fly   376 AFLPLYNLHTLN----LAENR----------LHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFR 426
            ..:.:.::..|.    ||:..          :.|.|..|..     |.|..:||...:...   .
plant   291 VLIVIDDVDDLEQLLALAKEPSWFGSGSRIIVTTKDKTIMK-----TLLVNDNNFYHVGYP---T 347

  Fly   427 NCSDLKELDLSSNQLTEVPEAVQDLS-----MLKTLDLGENQISEFKNNTFRNLNQLTGLRL--- 483
            |...|:.|.||:.|.:...:..::|:     :...|.|..:.:........::..:|...||   
plant   348 NKVALEILCLSAFQKSFPRDGFEELARKVAYLCGNLPLCLSVVGSSLRGQSKHRWKLQSDRLETS 412

  Fly   484 IDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIR---LDKNFLTDINGIFAT 545
            :|.:|.::....::.|.:       |.::..:....|..||.|..::   .|.|.  |:.....|
plant   413 LDRKIEDVLKSAYEKLSK-------KEQVLFLHIACFFNNTYISVVKTLLADSNL--DVRNGLKT 468

  Fly   546 LASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIG 610
            ||....:::|.     .|..|:..          .::.||.|..|::.      |....|...:.
plant   469 LADKCLVHISR-----VDRIFMHP----------LLQQLGRYIVLEQS------DEPEKRQFLVE 512

  Fly   611 AMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKI-SLNALRVAPVSAEKPVPEF 674
            |    ..|..:..|....|.:...:| |.::::...:.......: :|..||:...|:.|.|   
plant   513 A----EEIRDVLANETGTGSVLGISF-DMSKVSEFSISGRAFEAMRNLRFLRIYRRSSSKKV--- 569

  Fly   675 YLGGNPFECDCSMEWLQRINNLTTRQHP-----------HVVDLGNIECLMPHSRSAPL----RP 724
                 .......|::|.|:..|....:|           .:|.|.     ||||....|    :.
plant   570 -----TLRIVEDMKYLPRLRLLHWEHYPRKSLPRRFQPERLVVLH-----MPHSNLEKLWGGIQS 624

  Fly   725 LASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNR 789
            |.:|...|.               .:.:...|:....|.:.....|    ::.|  ..|..||:.
plant   625 LTNLKNIDL---------------SFSRKLKEIPNLSNATNLETLT----LIKC--SSLVELPSS 668

  Fly   790 IPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSL---AQLV-------NLRV 844
            |           :|:.:|:...:.|.:.|:.:..|. ||::|:..|:   :||.       |::.
plant   669 I-----------SNLQKLKALMMFGCKMLKVVPTNI-NLVSLEKVSMTLCSQLSSFPDISRNIKS 721

  Fly   845 LHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYR 909
            |.:...|:..:..:..:....|.:|.|....|..:   |:.| .|:.:|.|..:.:.::|....|
plant   722 LDVGKTKIEEVPPSVVKYWSRLDQLSLECRSLKRL---TYVP-PSITMLSLSFSDIETIPDCVIR 782

  Fly   910 HS-LQGLTLGRNAWSCRCQQLREL------AQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLA 967
            .: |:.||:     .| |::|..|      .:|:..|          :|      |.||.:.:..
plant   783 LTRLRTLTI-----KC-CRKLVSLPGLPPSLEFLCAN----------HC------RSLERVHSFH 825

  Fly   968 NGP-------DCSDLLDASASNISSSQDLAGGYRLP 996
            | |       :|.. ||..|......|.:.|...||
plant   826 N-PVKLLIFHNCLK-LDEKARRAIKQQRVEGYIWLP 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 2/5 (40%)
LRR_8 115..181 CDD:404697 14/84 (17%)
leucine-rich repeat 116..146 CDD:275380 5/29 (17%)
leucine-rich repeat 147..170 CDD:275380 7/39 (18%)
leucine-rich repeat 171..201 CDD:275380 8/39 (21%)
LRR 210..592 CDD:443914 82/435 (19%)
leucine-rich repeat 212..236 CDD:275380 9/33 (27%)
leucine-rich repeat 237..260 CDD:275380 5/23 (22%)
leucine-rich repeat 261..284 CDD:275380 6/23 (26%)
leucine-rich repeat 285..308 CDD:275380 3/22 (14%)
leucine-rich repeat 309..334 CDD:275380 4/24 (17%)
leucine-rich repeat 335..358 CDD:275380 6/22 (27%)
leucine-rich repeat 359..382 CDD:275380 4/27 (15%)
leucine-rich repeat 383..406 CDD:275380 6/36 (17%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 5/19 (26%)
leucine-rich repeat 454..477 CDD:275380 2/22 (9%)
leucine-rich repeat 478..499 CDD:275380 5/23 (22%)
leucine-rich repeat 502..525 CDD:275380 3/22 (14%)
leucine-rich repeat 526..548 CDD:275380 6/24 (25%)
leucine-rich repeat 590..617 CDD:275380 4/26 (15%)
leucine-rich repeat 618..641 CDD:275380 5/22 (23%)
leucine-rich repeat 642..689 CDD:275380 7/47 (15%)
LRRCT 679..736 CDD:214507 15/71 (21%)
LRR <775..>920 CDD:443914 33/155 (21%)
leucine-rich repeat 775..796 CDD:275380 5/20 (25%)
leucine-rich repeat 797..817 CDD:275380 3/19 (16%)
leucine-rich repeat 818..841 CDD:275380 8/32 (25%)
leucine-rich repeat 842..865 CDD:275380 2/22 (9%)
leucine-rich repeat 866..889 CDD:275380 6/22 (27%)
leucine-rich repeat 890..911 CDD:275380 4/20 (20%)
TIR 1045..1183 CDD:214587
AT5G41540NP_198969.1 PLN03210 1..984 CDD:215633 195/1011 (19%)
leucine-rich repeat 555..582 CDD:275380 8/34 (24%)
leucine-rich repeat 583..602 CDD:275380 2/18 (11%)
leucine-rich repeat 605..627 CDD:275380 8/26 (31%)
leucine-rich repeat 628..650 CDD:275380 4/36 (11%)
leucine-rich repeat 651..674 CDD:275380 7/39 (18%)
leucine-rich repeat 675..697 CDD:275380 6/22 (27%)
leucine-rich repeat 698..718 CDD:275380 4/19 (21%)
leucine-rich repeat 719..742 CDD:275380 2/22 (9%)
leucine-rich repeat 764..785 CDD:275380 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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