DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and AT5G36930

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001119319.1 Gene:AT5G36930 / 833662 AraportID:AT5G36930 Length:1191 Species:Arabidopsis thaliana


Alignment Length:884 Identity:176/884 - (19%)
Similarity:305/884 - (34%) Gaps:277/884 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 LSNANG-AVSGGSELQTL-DVSFNELRSLP--------DAWG-ASRLRRLQT-LSLQHNNISTLA 251
            ::|.:| .:...:|.:.: |::...|:.||        .|.| .|||:.:.: ||:..:.:..:.
plant   152 VANISGWDIKNRNEAECIADITREILKRLPCQYLHVPSYAVGLRSRLQHISSLLSIGSDGVRVIV 216

  Fly   252 PNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELREL-----------HLQGNDLYELP------ 299
            ...:.|:....:..:::|..    |..|.|:..|...           |||...|.::.      
plant   217 IYGMGGIGKTTLAKVAFNEF----SHLFEGSSFLENFREYSKKPEGRTHLQHQLLSDILRRNDIE 277

  Fly   300 -KGLLHRLEQ-------LLVLD--LSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRI---GSK 351
             |||.|.:::       |||:|  ...:||.|..:|...|....|:|:...:.:.|.::   ||.
plant   278 FKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSRIIITTRNMHLLKQLRAEGSY 342

  Fly   352 TFKELYFLQILDM------RNNS-----IGHIEE---------------GAFLPLYNLH----TL 386
            :.|||...:.|::      |.:.     :.|.||               ||||...::.    ||
plant   343 SPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTL 407

  Fly   387 NLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSS------------- 438
            .|.:        ||.|. .:..||.::.|.::|.:...|        ||::.             
plant   408 KLLK--------RIPND-NIQAKLQISFNALTIEQKDVF--------LDIACFFIGVDSYYVACI 455

  Fly   439 -NQLTEVPEAVQDLSMLKTL-DLGENQISEFKNNTFRNLNQLTGLRLIDNRIG--------NITV 493
             :.....|:.|..|.|.:.| .:..|.|  ..::..|::.:.....:...:.|        |..|
plant   456 LDGCNLYPDIVLSLLMERCLITISGNNI--MMHDLLRDMGRQIVREISPKKCGERSRLWSHNDVV 518

  Fly   494 GMFQDLPRLSVLNLAKN--------RIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLL 550
            |:   |.:.|..|..:.        ..|..|..||.|..|:..:.|.   ..|:||         
plant   519 GV---LKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLLELR---YVDLNG--------- 568

  Fly   551 WLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEA-------------------LGNYYKLQEEIR- 595
                        .|...|.:|:||..||..:|.                   |..::|.|...: 
plant   569 ------------SYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQSPPQP 621

  Fly   596 ---VTTLDASHN-RITEIGAMS-VPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKI 655
               |..||.||: .:.|....| .||..:|:.||...:..:..:..:...:|    :..|:.|.|
plant   622 ANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDKKL----VLLNLSSCI 682

  Fly   656 SLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSA 720
            .|:.| ...:...|.:...:|.      :||.  |:|:::.          ||.:|.|       
plant   683 ELDVL-PEEIYKLKSLESLFLS------NCSK--LERLDDA----------LGELESL------- 721

  Fly   721 PLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAA 785
                  :...:||....|  .|.|.:                           .:....|..|..
plant   722 ------TTLLADFTALRE--IPSTIN---------------------------QLKKLKRLSLNG 751

  Fly   786 LPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENN 850
            ....:..|:.:||.:.::...|                       |:..||:.|..:|:|.|...
plant   752 CKGLLSDDIDNLYSEKSHSVSL-----------------------LRPVSLSGLTYMRILSLGYC 793

  Fly   851 KLT-ALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSL-EVLRLDNNRLSSLPHLQYRHSLQ 913
            .|: .|...:..||..||:|.|..|...::. ..|..|.:| |:|..|.::|.|:  |....||.
plant   794 NLSDELIPEDIGSLSFLRDLDLRGNSFCNLP-TDFATLPNLGELLLSDCSKLQSI--LSLPRSLL 855

  Fly   914 GLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCL 952
            .|.:|      :|..|:........:|:.....:|...|
plant   856 FLDVG------KCIMLKRTPDISKCSALFKLQLNDCISL 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380 0/1 (0%)
LRR 210..592 CDD:443914 100/502 (20%)
leucine-rich repeat 212..236 CDD:275380 9/33 (27%)
leucine-rich repeat 237..260 CDD:275380 3/23 (13%)
leucine-rich repeat 261..284 CDD:275380 4/22 (18%)
leucine-rich repeat 285..308 CDD:275380 9/40 (23%)
leucine-rich repeat 309..334 CDD:275380 9/26 (35%)
leucine-rich repeat 335..358 CDD:275380 7/25 (28%)
leucine-rich repeat 359..382 CDD:275380 9/48 (19%)
leucine-rich repeat 383..406 CDD:275380 6/26 (23%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 4/33 (12%)
leucine-rich repeat 454..477 CDD:275380 4/23 (17%)
leucine-rich repeat 478..499 CDD:275380 4/28 (14%)
leucine-rich repeat 502..525 CDD:275380 7/30 (23%)
leucine-rich repeat 526..548 CDD:275380 4/21 (19%)
leucine-rich repeat 590..617 CDD:275380 9/32 (28%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 10/46 (22%)
LRRCT 679..736 CDD:214507 10/56 (18%)
LRR <775..>920 CDD:443914 35/146 (24%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
leucine-rich repeat 797..817 CDD:275380 3/19 (16%)
leucine-rich repeat 818..841 CDD:275380 4/22 (18%)
leucine-rich repeat 842..865 CDD:275380 7/23 (30%)
leucine-rich repeat 866..889 CDD:275380 7/22 (32%)
leucine-rich repeat 890..911 CDD:275380 7/21 (33%)
TIR 1045..1183 CDD:214587
AT5G36930NP_001119319.1 PLN03210 15..>890 CDD:215633 176/884 (20%)
leucine-rich repeat 602..622 CDD:275380 3/19 (16%)
leucine-rich repeat 625..655 CDD:275380 10/29 (34%)
leucine-rich repeat 673..696 CDD:275380 6/27 (22%)
leucine-rich repeat 697..720 CDD:275380 7/40 (18%)
leucine-rich repeat 721..743 CDD:275380 6/63 (10%)
leucine-rich repeat 744..784 CDD:275380 10/62 (16%)
leucine-rich repeat 785..809 CDD:275380 7/23 (30%)
leucine-rich repeat 810..832 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.