DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT4G26540

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_567748.5 Gene:AT4G26540 / 828760 AraportID:AT4G26540 Length:1091 Species:Arabidopsis thaliana


Alignment Length:732 Identity:194/732 - (26%)
Similarity:297/732 - (40%) Gaps:179/732 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VADAHAQQQCNWQYGLTTMDIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQELLHASELAPGL 85
            |||.   ..|||      :.::|:.|      |...::|:.    .:|||.|   |..:.|    
plant    51 VADT---SPCNW------VGVKCNRR------GEVSEIQLK----GMDLQGS---LPVTSL---- 89

  Fly    86 FRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWG----------PGKTLELHGQS 140
             |.|:.|:.|.:.:..|..|.|........|:.|.| |.|::.|          ..|||.|:..:
plant    90 -RSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDL-SDNSLSGDIPVEIFRLKKLKTLSLNTNN 152

  Fly   141 FQG--------LKELSELHLGDNNIR-QLPEGVWCSMPSLQLLNLTQNRIRSAEF---LGFSEKL 193
            .:|        |..|.||.|.||.:. ::|..:. .:.:||:|....|:....|.   :|..|.|
plant   153 LEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIG-ELKNLQVLRAGGNKNLRGELPWEIGNCENL 216

  Fly   194 -CAGSALSNANG----AVSGGSELQTLDVSFNELRS--LPDAWGASRLRRLQTLSLQHNNISTLA 251
             ..|.|.::.:|    ::.....:||:.: :..|.|  :||..|  ....||.|.|..|:||...
plant   217 VMLGLAETSLSGKLPASIGNLKRVQTIAI-YTSLLSGPIPDEIG--YCTELQNLYLYQNSISGSI 278

  Fly   252 PNALAGLSSLRVLNISYNHLV-SLPSEAFAGN-KELRELHLQGNDLY-ELPKGLLHRLEQLLVLD 313
            |..:.||..|:.|.:..|:|| .:|:|  .|| .||..:....|.|. .:|:. ..:||.|..|.
plant   279 PTTIGGLKKLQSLLLWQNNLVGKIPTE--LGNCPELWLIDFSENLLTGTIPRS-FGKLENLQELQ 340

  Fly   314 LSGNQ--------------LTSHHVDNSTFAGLIRLIVLNLSN--------NALTRIGSKTFKEL 356
            ||.||              ||...:||:...|.|..::.||.:        |.||....::..:.
plant   341 LSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLMSNLRSLTMFFAWQNKLTGNIPQSLSQC 405

  Fly   357 YFLQILDMRNNSI-GHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIV 420
            ..||.:|:..||: |.|.:..|                         ||..||||.|.:|.:|..
plant   406 RELQAIDLSYNSLSGSIPKEIF-------------------------GLRNLTKLLLLSNDLSGF 445

  Fly   421 ESQAFRNCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQ--------ISEFKNNTFRNL- 475
            ......||::|..|.|:.|:|. .:|..:.:|..|..:|:.||:        ||..::..|.:| 
plant   446 IPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLH 510

  Fly   476 -NQLTG----------LRLI---DNRIGNIT---VGMFQDLPRLSVLNLAKNRIQSIERGAFDKN 523
             |.|:|          |:.|   ||.:.:..   :|:   |..|:.|||||||:...........
plant   511 TNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGL---LTELTKLNLAKNRLSGEIPREISTC 572

  Fly   524 TEIEAIRLDKN-FLTDINGIFATLASL-LWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGN 586
            ..::.:.|.:| |..:|......:.|| :.||||.|..|    ..|||..       :.::.|| 
plant   573 RSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCNRFV----GEIPSRF-------SDLKNLG- 625

  Fly   587 YYKLQEEIRVTTLDASHNRITEIGAMSV----PNSIELLFINNNIIGQIQANTFVDKTRLARVDL 647
                       .||.|||::|  |.::|    .|.:.|....|:..|.:....|.  .||...||
plant   626 -----------VLDVSHNQLT--GNLNVLTDLQNLVSLNISYNDFSGDLPNTPFF--RRLPLSDL 675

  Fly   648 YANVLSKISLNALRVAP 664
            .:|....|| ||:...|
plant   676 ASNRGLYIS-NAISTRP 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 8/24 (33%)
leucine-rich repeat 92..115 CDD:275380 5/22 (23%)
LRR_8 115..181 CDD:404697 23/84 (27%)
leucine-rich repeat 116..146 CDD:275380 12/47 (26%)
leucine-rich repeat 147..170 CDD:275380 7/23 (30%)
leucine-rich repeat 171..201 CDD:275380 10/33 (30%)
LRR 210..592 CDD:443914 118/438 (27%)
leucine-rich repeat 212..236 CDD:275380 7/25 (28%)
leucine-rich repeat 237..260 CDD:275380 10/22 (45%)
leucine-rich repeat 261..284 CDD:275380 9/24 (38%)
leucine-rich repeat 285..308 CDD:275380 5/23 (22%)
leucine-rich repeat 309..334 CDD:275380 11/38 (29%)
leucine-rich repeat 335..358 CDD:275380 5/30 (17%)
leucine-rich repeat 359..382 CDD:275380 8/23 (35%)
leucine-rich repeat 383..406 CDD:275380 2/22 (9%)
leucine-rich repeat 407..430 CDD:275380 9/22 (41%)
leucine-rich repeat 431..451 CDD:275380 6/20 (30%)
leucine-rich repeat 454..477 CDD:275380 8/32 (25%)
leucine-rich repeat 478..499 CDD:275380 7/36 (19%)
leucine-rich repeat 502..525 CDD:275380 8/22 (36%)
leucine-rich repeat 526..548 CDD:275380 4/22 (18%)
leucine-rich repeat 590..617 CDD:275380 8/30 (27%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 9/23 (39%)
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT4G26540NP_567748.5 PLN00113 32..1038 CDD:215061 194/732 (27%)
leucine-rich repeat 119..142 CDD:275380 6/23 (26%)
leucine-rich repeat 143..166 CDD:275380 6/22 (27%)
leucine-rich repeat 167..190 CDD:275380 7/23 (30%)
leucine-rich repeat 191..215 CDD:275380 6/23 (26%)
leucine-rich repeat 216..239 CDD:275380 4/22 (18%)
leucine-rich repeat 264..287 CDD:275380 10/22 (45%)
leucine-rich repeat 288..311 CDD:275380 9/24 (38%)
leucine-rich repeat 312..335 CDD:275380 5/23 (22%)
leucine-rich repeat 336..359 CDD:275380 6/22 (27%)
leucine-rich repeat 360..381 CDD:275380 6/20 (30%)
leucine-rich repeat 384..407 CDD:275380 3/22 (14%)
leucine-rich repeat 408..455 CDD:275380 19/71 (27%)
leucine-rich repeat 456..479 CDD:275380 7/22 (32%)
leucine-rich repeat 480..503 CDD:275380 6/22 (27%)
leucine-rich repeat 504..526 CDD:275380 5/21 (24%)
leucine-rich repeat 527..550 CDD:275380 6/25 (24%)
leucine-rich repeat 551..572 CDD:275380 8/20 (40%)
leucine-rich repeat 575..598 CDD:275380 4/22 (18%)
leucine-rich repeat 599..623 CDD:275380 10/34 (29%)
leucine-rich repeat 624..646 CDD:275380 10/35 (29%)
leucine-rich repeat 647..670 CDD:275380 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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