DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT4G11170

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_192855.1 Gene:AT4G11170 / 826718 AraportID:AT4G11170 Length:1095 Species:Arabidopsis thaliana


Alignment Length:300 Identity:59/300 - (19%)
Similarity:107/300 - (35%) Gaps:80/300 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 GTMVSAGESDSESDLGEGM--DVEEFPETPYVHSPEEEFGAAGEQVEELPEEHKSLIWFLVKQVR 469
            |.|:...|:..| :|.|.|  |:|:...|    :||.|.    |.:::.....:.|....:::..
plant     4 GGMLQFQEAIRE-ELEEAMKSDLEKILST----APESEL----EHIKKDLAGFQKLFHRFLQEKG 59

  Fly   470 PGMDLSKVVLPTFILEPRSFLDKLADSYYHADILSKAVLEDDPFTRMKTVVQWYLSGFYKKPKGL 534
            |.:|..|:..|.            .||....:.:....|.|:..:.:..:|...|:|......|.
plant    60 PSVDWGKIQRPP------------EDSIQPYEKIKAKGLPDNIASVLNKLVVVKLNGGLGTSMGC 112

  Fly   535 KKPYNPILGETFRCYWQHENGSRTF--YIAEQVSHHPPVSVFYVTNRQDGFCISCSILAKSKFYG 597
            |.| ..::|.      ::||   ||  ...:|:.|   ::..|.|:..       .:|..|....
plant   113 KGP-KSLIGV------RNEN---TFLDLTVKQIEH---LNTVYNTDVP-------LVLMNSFNTD 157

  Fly   598 NSTSAILEGVATLTLLPRGESYTLAVPYAHCKGILMGTLSMELGGKVSIE-----CENTGYKTEL 657
            ..|..||:                  .|:||: :.:.|.:.....::|.|     .::..|..|.
plant   158 EDTKKILQ------------------KYSHCR-VKIHTFNQSRYPRISKESLLPIAKDLSYSVEN 203

  Fly   658 EFKLKPFLGGNEYTNL--------VVGKLKLGKETMATIN 689
            .....|...|:.|.:.        ::|:   |||.:...|
plant   204 AETWYPPGHGDIYASFYNSGLLDRLIGE---GKEYIFVSN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 39/188 (21%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380
leucine-rich repeat 359..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..430 CDD:275380 9/24 (38%)
leucine-rich repeat 431..451 CDD:275380 5/19 (26%)
leucine-rich repeat 454..477 CDD:275380 3/22 (14%)
leucine-rich repeat 478..499 CDD:275380 3/20 (15%)
leucine-rich repeat 502..525 CDD:275380 3/22 (14%)
leucine-rich repeat 526..548 CDD:275380 5/21 (24%)
leucine-rich repeat 590..617 CDD:275380 5/26 (19%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 11/59 (19%)
LRRCT 679..736 CDD:214507 3/10 (30%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT4G11170NP_192855.1 PLN03210 1..1005 CDD:215633 58/299 (19%)
leucine-rich repeat 610..632 CDD:275380
leucine-rich repeat 633..655 CDD:275380
leucine-rich repeat 656..679 CDD:275380
leucine-rich repeat 680..702 CDD:275380
leucine-rich repeat 724..762 CDD:275380
leucine-rich repeat 767..790 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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