DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT4G09430

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001319887.1 Gene:AT4G09430 / 826526 AraportID:AT4G09430 Length:555 Species:Arabidopsis thaliana


Alignment Length:449 Identity:82/449 - (18%)
Similarity:141/449 - (31%) Gaps:179/449 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   780 RQDLAALPNRIPQDVSDLYLDGNNM---------PE---------LEVGHLTGRR---------N 817
            :.|:..:|.....:.||:....|:.         ||         .:||:::|:.         |
plant    99 QDDIIVVPIFYKVEPSDVRYQKNSFEVKLQHYRDPEKILKWKGALTQVGNMSGKHFQTCSDEATN 163

  Fly   818 LRALYLNASN-LMTLQNGSLAQLVNLRVLHLENNKLTALE--GTEFRSLGLL-----------RE 868
            :..:....|| |..::...|..||.:.. |:|..:|...:  .:|.|.:|:|           ..
plant   164 IAEIVSKISNRLRKMKPTDLINLVGMDA-HMEKMQLLLDKEPKSEVRMIGILGMGGIGKTAIANY 227

  Fly   869 LY------------------------LHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYR 909
            ||                        |...:|:||.|.....|.:.|...:....:  |.|.::.
plant   228 LYNQFSHEYWAHCFIEDAWNTNDPTHLQRKLLSHICNDENAKLFTREAGAMKIKGI--LKHKKFF 290

  Fly   910 HSLQGLTLGRNAWSCRCQQLRELAQFVS-------------D----NAMVVRDAHDIYCLDA--- 954
            ..:.|:.        :.:|:..||:..|             |    |:..|.:.:::.|||:   
plant   291 LVIDGVN--------KAEQVHALAKERSWFGPGSLIIITTRDRGLLNSCGVNNVYEVKCLDSKDA 347

  Fly   955 -----------------GIKRELELIGNLANGPDCSDLLDASASNISSSQDLAGG----YRL--- 995
                             |.:|.......||:|...:  |.|.||::|....:.|.    :||   
plant   348 LQVFEKFAFGGRNPPFHGSERLFTRASQLAHGLPYA--LVAFASHLSEQTTIEGWEDELFRLEDY 410

  Fly   996 PLLAAVLVL-------------IFLVVVLIIVFVFRESVRMWLFAHY----GVRVCEPRFEDAGK 1043
            |......:|             :||.|..:....|     :||...:    |.|:...|   |..
plant   411 PQKNVEEILRASYDDLDYYEQSVFLQVACLFNGSF-----LWLIRAFLGKLGSRINSLR---AKS 467

  Fly  1044 LYD-----AIILH---------------------------SEKDYEFVCRNIAAELEHG 1070
            |.|     .:|:|                           .|:.|:.:.|||.....||
plant   468 LLDISNDGRLIMHFLVEQIGKEIVRQQSNCIPSEQKFLWKPEEIYDVLARNIGTSKIHG 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380
leucine-rich repeat 359..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..430 CDD:275380
leucine-rich repeat 431..451 CDD:275380
leucine-rich repeat 454..477 CDD:275380
leucine-rich repeat 478..499 CDD:275380
leucine-rich repeat 502..525 CDD:275380
leucine-rich repeat 526..548 CDD:275380
leucine-rich repeat 590..617 CDD:275380
leucine-rich repeat 618..641 CDD:275380
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914 36/204 (18%)
leucine-rich repeat 775..796 CDD:275380 2/15 (13%)
leucine-rich repeat 797..817 CDD:275380 6/46 (13%)
leucine-rich repeat 818..841 CDD:275380 5/23 (22%)
leucine-rich repeat 842..865 CDD:275380 5/24 (21%)
leucine-rich repeat 866..889 CDD:275380 9/57 (16%)
leucine-rich repeat 890..911 CDD:275380 3/20 (15%)
TIR 1045..1183 CDD:214587 10/58 (17%)
AT4G09430NP_001319887.1 PLN03210 1..>544 CDD:215633 82/449 (18%)
Blue background indicates that the domain is not in the aligned region.

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