DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and AT4G08850

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_849538.2 Gene:AT4G08850 / 826456 AraportID:AT4G08850 Length:1045 Species:Arabidopsis thaliana


Alignment Length:586 Identity:151/586 - (25%)
Similarity:246/586 - (41%) Gaps:87/586 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SGTGTPL----------DLQVAEAAGRL-----DLQCSQELLHASE-----LAPGLFRQLQKLSE 94
            |||.:||          ||.:.:..|.:     ||. :.:.||..|     ..|....:|.|::|
plant   131 SGTISPLWGRFSKLEYFDLSINQLVGEIPPELGDLS-NLDTLHLVENKLNGSIPSEIGRLTKVTE 194

  Fly    95 LRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHG---QSFQGLKELSELHLGDNN 156
            :.|....|....|::|..|..|..|.|..::          |.|   .....|..|.||.|..||
plant   195 IAIYDNLLTGPIPSSFGNLTKLVNLYLFINS----------LSGSIPSEIGNLPNLRELCLDRNN 249

  Fly   157 IRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNE 221
            :.......:.::.::.|||:.:|:: |.|.                ...:...:.|.||.:..|:
plant   250 LTGKIPSSFGNLKNVTLLNMFENQL-SGEI----------------PPEIGNMTALDTLSLHTNK 297

  Fly   222 LRS-LPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKEL 285
            |.. :|...|  .::.|..|.|..|.::...|..|..:.|:..|.||.|.|.....::|.....|
plant   298 LTGPIPSTLG--NIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTAL 360

  Fly   286 RELHLQGNDLY-ELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIG 349
            ..|.|:.|.|. .:|.|:.:..| |.||.|..|..|....|.....|  :|..|.|.:|......
plant   361 EWLFLRDNQLSGPIPPGIANSTE-LTVLQLDTNNFTGFLPDTICRGG--KLENLTLDDNHFEGPV 422

  Fly   350 SKTFKELYFLQILDMRNNSI-GHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLN 413
            .|:.::...|..:..:.||. |.|.| ||.....|:.::|:.|..|...:..:.....|....|:
plant   423 PKSLRDCKSLIRVRFKGNSFSGDISE-AFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILS 486

  Fly   414 NNLVSIVESQAFRNCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQ 477
            ||.::........|.:.|.:||||||::| |:||::.:::.:..|.|..|::|....:..|.|..
plant   487 NNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTN 551

  Fly   478 LTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRI-QSIERGAFDKNTEIEAIRLDKNFLT-DIN 540
            |..|.|..||..:.......:||||..:||::|.: |:|..| ..|.::::.:.|..|.|. :|:
plant   552 LEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEG-LTKLSQLQMLDLSYNQLDGEIS 615

  Fly   541 GIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNR 605
            ..|.:|.:|..|:||.|:|    ...||.:.|                   :.:.:|.:|.|||.
plant   616 SQFRSLQNLERLDLSHNNL----SGQIPPSFK-------------------DMLALTHVDVSHNN 657

  Fly   606 I 606
            :
plant   658 L 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 7/34 (21%)
leucine-rich repeat 92..115 CDD:275380 6/22 (27%)
LRR_8 115..181 CDD:404697 16/68 (24%)
leucine-rich repeat 116..146 CDD:275380 6/32 (19%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..201 CDD:275380 6/29 (21%)
LRR 210..592 CDD:443914 106/387 (27%)
leucine-rich repeat 212..236 CDD:275380 7/24 (29%)
leucine-rich repeat 237..260 CDD:275380 6/22 (27%)
leucine-rich repeat 261..284 CDD:275380 6/22 (27%)
leucine-rich repeat 285..308 CDD:275380 7/23 (30%)
leucine-rich repeat 309..334 CDD:275380 8/24 (33%)
leucine-rich repeat 335..358 CDD:275380 5/22 (23%)
leucine-rich repeat 359..382 CDD:275380 8/23 (35%)
leucine-rich repeat 383..406 CDD:275380 4/22 (18%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 11/20 (55%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 5/20 (25%)
leucine-rich repeat 502..525 CDD:275380 8/23 (35%)
leucine-rich repeat 526..548 CDD:275380 6/22 (27%)
leucine-rich repeat 590..617 CDD:275380 5/17 (29%)
leucine-rich repeat 618..641 CDD:275380
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
AT4G08850NP_849538.2 PLN00113 20..1035 CDD:215061 151/586 (26%)
leucine-rich repeat 95..111 CDD:275380
leucine-rich repeat 120..143 CDD:275380 5/11 (45%)
leucine-rich repeat 144..167 CDD:275380 5/23 (22%)
leucine-rich repeat 170..191 CDD:275380 5/20 (25%)
leucine-rich repeat 192..215 CDD:275380 6/22 (27%)
leucine-rich repeat 216..239 CDD:275380 6/32 (19%)
leucine-rich repeat 240..263 CDD:275380 6/22 (27%)
leucine-rich repeat 264..287 CDD:275380 6/39 (15%)
leucine-rich repeat 288..311 CDD:275380 7/24 (29%)
leucine-rich repeat 312..335 CDD:275380 6/22 (27%)
leucine-rich repeat 336..359 CDD:275380 6/22 (27%)
leucine-rich repeat 360..383 CDD:275380 7/22 (32%)
leucine-rich repeat 384..404 CDD:275380 7/19 (37%)
leucine-rich repeat 408..429 CDD:275380 5/20 (25%)
leucine-rich repeat 432..503 CDD:275380 17/71 (24%)
leucine-rich repeat 456..477 CDD:275380 4/20 (20%)
leucine-rich repeat 504..527 CDD:275380 11/22 (50%)
leucine-rich repeat 528..551 CDD:275380 6/22 (27%)
leucine-rich repeat 552..575 CDD:275380 6/22 (27%)
leucine-rich repeat 576..599 CDD:275380 8/23 (35%)
leucine-rich repeat 600..623 CDD:275380 6/22 (27%)
leucine-rich repeat 624..645 CDD:275380 9/43 (21%)
leucine-rich repeat 648..670 CDD:275380 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.

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