DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and BAM2

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_190536.1 Gene:BAM2 / 824129 AraportID:AT3G49670 Length:1002 Species:Arabidopsis thaliana


Alignment Length:975 Identity:224/975 - (22%)
Similarity:358/975 - (36%) Gaps:284/975 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DAHAQQQCNWQYGLT-------TMDIRCSVRALESGTGTPLDLQVAEAAGRLD-----LQCSQEL 75
            |.|:....:|....|       |.|:  |:|.:     |.|||.....:|.|.     |...|.|
plant    41 DEHSPLLTSWNLSTTFCSWTGVTCDV--SLRHV-----TSLDLSGLNLSGTLSSDVAHLPLLQNL 98

  Fly    76 -LHASELAPGLFRQLQKLSELRIDACKLQR------VPPNAFEGLMSLKRLTLESHNAVWGPGKT 133
             |.|::::..:..|:..|.|||  ...|..      .|.....||::|:.|.|.::|        
plant    99 SLAANQISGPIPPQISNLYELR--HLNLSNNVFNGSFPDELSSGLVNLRVLDLYNNN-------- 153

  Fly   134 LELHGQ---SFQGLKELSELHLGDNNIR-QLPE--GVWCSMPSLQLLNLTQNRIRS---AEF--L 187
              |.|.   |...|.:|..||||.|... ::|.  |.|   |.|:.|.::.|.:..   .|.  |
plant   154 --LTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTW---PVLEYLAVSGNELTGKIPPEIGNL 213

  Fly   188 GFSEKLCAGSALSNANG---AVSGGSELQTLDVSFNELR-SLPDAWGASRLRRLQTLSLQHNNIS 248
            ....:|..|...:..||   .:...|||...|.:...|. .:|...|  :|::|.||.||.|..:
plant   214 TTLRELYIGYYNAFENGLPPEIGNLSELVRFDAANCGLTGEIPPEIG--KLQKLDTLFLQVNAFT 276

  Fly   249 TLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLD 313
            ......|..:|||:.:::|.|........:|:..|.|..|:|..|.||......:..:.:|.||.
plant   277 GTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEFIGEMPELEVLQ 341

  Fly   314 LSGNQLTSHHVDNSTFAGLI--------RLIVLNLSNNALTRI-------GSK-----TFKELYF 358
            |..|          .|.|.|        ||::|:||:|.||..       |::     |.....|
plant   342 LWEN----------NFTGSIPQKLGENGRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLF 396

  Fly   359 LQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLH-TLDNRIFNGLYVLTKLTLNNN-LVSIVE 421
            ..|.|    |:|..|        :|..:.:.||.|: ::...:| ||..|:::.|.:| |...:.
plant   397 GSIPD----SLGKCE--------SLTRIRMGENFLNGSIPKELF-GLPKLSQVELQDNYLTGELP 448

  Fly   422 SQAFRNCSDLKELDLSSNQLT-EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLID 485
            ........||.::.||:|||: .:|.|:.:||.::.|.|..|:.|                    
plant   449 ISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLLLDGNKFS-------------------- 493

  Fly   486 NRIGNI--TVGMFQDLPRLSVL-NLAKNRI-QSIERGAFDKNTEIEAIRLDKNFLT-DINGIFAT 545
               |:|  .:|..|.|.:|... ||...|| ..|.|...     :..:.|.:|.|: ||......
plant   494 ---GSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKL-----LTFVDLSRNELSGDIPNELTG 550

  Fly   546 LASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIG 610
            :..|.:||||.||||    ..||..:..:.                   .:|::|.|:|.::.: 
plant   551 MKILNYLNLSRNHLV----GSIPVTIASMQ-------------------SLTSVDFSYNNLSGL- 591

  Fly   611 AMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFY 675
               ||::.:..:.|        ..:||..:.|.  ..|.....| ..:...|.|:||        
plant   592 ---VPSTGQFSYFN--------YTSFVGNSHLC--GPYLGPCGK-GTHQSHVKPLSA-------- 634

  Fly   676 LGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSAS--------- 731
                                 ||:.   ::.||.:.|.|..:..|.::..:..:||         
plant   635 ---------------------TTKL---LLVLGLLFCSMVFAIVAIIKARSLRNASEAKAWRLTA 675

  Fly   732 ----DFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCG-----------RQ 781
                ||.|.                   :|:         |:....||:..|           :.
plant   676 FQRLDFTCD-------------------DVL---------DSLKEDNIIGKGGAGIVYKGTMPKG 712

  Fly   782 DLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYL---NASNLMT---LQNGSLAQLV 840
            ||.|:...........:..|.|.....:|.:..|..:|.|..   :.:||:.   :.||||.:::
plant   713 DLVAVKRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVL 777

  Fly   841 NLRV---LHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSS 902
            :.:.   ||.......|||..:    ||   .|||::.         .||:....::.:|..|.|
plant   778 HGKKGGHLHWNTRYKIALEAAK----GL---CYLHHDC---------SPLIVHRDVKSNNILLDS 826

  Fly   903  902
            plant   827  826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 7/30 (23%)
leucine-rich repeat 92..115 CDD:275380 8/28 (29%)
LRR_8 115..181 CDD:404697 21/71 (30%)
leucine-rich repeat 116..146 CDD:275380 8/32 (25%)
leucine-rich repeat 147..170 CDD:275380 9/25 (36%)
leucine-rich repeat 171..201 CDD:275380 7/34 (21%)
LRR 210..592 CDD:443914 106/410 (26%)
leucine-rich repeat 212..236 CDD:275380 6/24 (25%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 4/22 (18%)
leucine-rich repeat 285..308 CDD:275380 6/22 (27%)
leucine-rich repeat 309..334 CDD:275380 8/32 (25%)
leucine-rich repeat 335..358 CDD:275380 9/34 (26%)
leucine-rich repeat 359..382 CDD:275380 5/22 (23%)
leucine-rich repeat 383..406 CDD:275380 7/23 (30%)
leucine-rich repeat 407..430 CDD:275380 4/23 (17%)
leucine-rich repeat 431..451 CDD:275380 8/20 (40%)
leucine-rich repeat 454..477 CDD:275380 4/22 (18%)
leucine-rich repeat 478..499 CDD:275380 4/22 (18%)
leucine-rich repeat 502..525 CDD:275380 7/24 (29%)
leucine-rich repeat 526..548 CDD:275380 5/22 (23%)
leucine-rich repeat 590..617 CDD:275380 6/26 (23%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 7/46 (15%)
LRRCT 679..736 CDD:214507 11/69 (16%)
LRR <775..>920 CDD:443914 32/148 (22%)
leucine-rich repeat 775..796 CDD:275380 5/31 (16%)
leucine-rich repeat 797..817 CDD:275380 4/19 (21%)
leucine-rich repeat 818..841 CDD:275380 8/28 (29%)
leucine-rich repeat 842..865 CDD:275380 5/25 (20%)
leucine-rich repeat 866..889 CDD:275380 5/22 (23%)
leucine-rich repeat 890..911 CDD:275380 3/13 (23%)
TIR 1045..1183 CDD:214587
BAM2NP_190536.1 PLN00113 27..961 CDD:215061 224/975 (23%)
leucine-rich repeat 71..94 CDD:275380 7/27 (26%)
leucine-rich repeat 95..118 CDD:275380 6/22 (27%)
leucine-rich repeat 119..143 CDD:275380 6/25 (24%)
leucine-rich repeat 144..167 CDD:275380 8/32 (25%)
leucine-rich repeat 168..191 CDD:275380 9/25 (36%)
leucine-rich repeat 192..215 CDD:275380 5/22 (23%)
leucine-rich repeat 216..240 CDD:275380 4/23 (17%)
leucine-rich repeat 241..288 CDD:275380 13/48 (27%)
leucine-rich repeat 289..310 CDD:275380 4/20 (20%)
leucine-rich repeat 313..336 CDD:275380 6/22 (27%)
leucine-rich repeat 337..360 CDD:275380 8/32 (25%)
leucine-rich repeat 361..381 CDD:275380 7/19 (37%)
leucine-rich repeat 385..405 CDD:275380 5/23 (22%)
leucine-rich repeat 409..432 CDD:275380 7/23 (30%)
leucine-rich repeat 433..456 CDD:275380 4/22 (18%)
leucine-rich repeat 458..481 CDD:275380 9/22 (41%)
leucine-rich repeat 482..505 CDD:275380 7/45 (16%)
leucine-rich repeat 506..529 CDD:275380 8/22 (36%)
leucine-rich repeat 530..551 CDD:275380 5/20 (25%)
leucine-rich repeat 554..577 CDD:275380 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.

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