DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and RLP41

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001327885.1 Gene:RLP41 / 822092 AraportID:AT3G25010 Length:912 Species:Arabidopsis thaliana


Alignment Length:936 Identity:211/936 - (22%)
Similarity:330/936 - (35%) Gaps:316/936 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWC 166
            |..|.|::|          :..:|.|.|.|.......|:|...|  :|.:....|......||||
plant    47 LSCVSPSSF----------VTFNNPVVGLGACGPHQIQAFTQFK--NEFNTRACNHSSPWNGVWC 99

  Fly   167 SMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGA 231
            .       |.| ..:...:|:.     |       .:|.:...|.|    ..|:||||       
plant   100 D-------NST-GAVTKIQFMA-----C-------LSGTLKSNSSL----FQFHELRS------- 133

  Fly   232 SRLRRLQTLSLQHNNISTLAPNALAG-LSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDL 295
                    |.|.|||.::.:.::..| |:.|.||.:|        |..|.|              
plant   134 --------LLLIHNNFTSSSISSKFGMLNKLEVLFLS--------SSGFLG-------------- 168

  Fly   296 YELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTF-KELYFL 359
             ::|                           .:|:.|..|..|:||:|.||  ||.:| :.|..|
plant   169 -QVP---------------------------FSFSNLSMLSALDLSDNELT--GSLSFVRNLRKL 203

  Fly   360 QILDMRNNSIGHIEEGAFLP---LYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTL-NNNLVSIV 420
            ::||:..|..    .|...|   |:.||         |            ||.|:| :|:..|..
plant   204 RVLDVSYNHF----SGILNPNSSLFELH---------H------------LTYLSLGSNSFTSST 243

  Fly   421 ESQAFRNCSDLKELDLSSNQ-LTEVPEAVQDLSMLKTLDLGENQISEFKNN--TFRNLNQLTGLR 482
            ....|.|.:.|:.||:|||. ..:||..:.:|:.|..|.|   .:::|..:  ..:||.:|:.|.
plant   244 LPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYL---PLNDFTGSLPLVQNLTKLSILA 305

  Fly   483 LIDNRI-GNITVGMFQDLPRLSVLNLAKNRIQ-SIERGAFDKNTEIEAIRLDKNFLTDINGIFAT 545
            |..|.. |.|...:| .:|.||.|:|..|.:. |||......::.:|::.|.||...  ..|...
plant   306 LFGNHFSGTIPSSLF-TMPFLSYLSLKGNNLNGSIEVPNSSSSSRLESLYLGKNHFE--GKILKP 367

  Fly   546 LASLLWLNLSENHLVWFDYAFIPS-------------NLKWLDIHGNYIEALG----NYYKLQEE 593
            ::.|  :||.|     .|.:|:.:             :|..||:.|::|...|    :|..|   
plant   368 ISKL--INLKE-----LDLSFLSTSYPIDLSLFSSFKSLLVLDLTGDWISQAGLSSDSYISL--- 422

  Fly   594 IRVTTLDASHNRITEIG-----AMSVPNSIELLFINNN-IIGQIQ---------ANTFVDKTRLA 643
                ||:|.:.:...|.     ..|:|| :|.:.::|| :.|:|.         ::.|:....|.
plant   423 ----TLEALYMKQCNISDFPNILKSLPN-LECIDVSNNRVSGKIPEWLWSLPRLSSVFIGDNLLT 482

  Fly   644 RVDLYANVLSKISLNALRVAPVSAEKPVPE-------FYLGGNPFECD-----CSMEWLQ----R 692
            ..:..:.:|...|:..|.:...|.|..:|.       |....|.|:.|     |:...|.    |
plant   483 GFEGSSEILVNSSVQILVLDSNSLEGALPHLPLSIIYFSARYNRFKGDIPLSICNRSSLDVLDLR 547

  Fly   693 INNLTTRQHPHVVDL-------GNIECLMP--HSRSAPLRPL--------ASLSASDFVCKYESH 740
            .||.|....|.:.:|       .|:|..:|  :...||||.|        ..|..|..       
plant   548 YNNFTGPIPPCLSNLLFLNLRKNNLEGSIPDTYFADAPLRSLDVGYNRLTGKLPRSLL------- 605

  Fly   741 CPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGN--- 802
                                 |||.....:...|    |.:|......::...:..|.|..|   
plant   606 ---------------------NCSALQFLSVDHN----GIEDTFPFYLKVLPKLQVLLLSSNKFY 645

  Fly   803 -----------NMPELEVGHLTGRR-----------NLRA----------------------LYL 823
                       ..|||.:..:.|.:           |.:|                      .||
plant   646 GPLSPPNQGSLGFPELRILEIAGNKLTGSLPQDFFVNWKASSLTMNEDQGLYMVYSKVVYGIYYL 710

  Fly   824 NASNLMTLQNGSLAQ-----LVNLRVLHLENNKLTALEGTEFRSLGLLRELY---LHNNMLTHIS 880
            :....:.||...|:.     |.:...:.|..|:   |||....|:|||:.|.   |.||..|...
plant   711 SYLATIDLQYKGLSMEQKWVLTSSATIDLSGNR---LEGEIPESIGLLKALIALNLSNNAFTGHI 772

  Fly   881 NATFEPLVSLEVLRLDNNRLS-SLPH 905
            ..:...||.:|.|.|.:|:|| ::|:
plant   773 PLSLANLVKIESLDLSSNQLSGTIPN 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 4/12 (33%)
LRR_8 115..181 CDD:290566 15/65 (23%)
leucine-rich repeat 116..146 CDD:275380 6/29 (21%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..201 CDD:275380 4/29 (14%)
LRR_RI 210..464 CDD:238064 65/260 (25%)
leucine-rich repeat 212..236 CDD:275380 6/23 (26%)
LRR_8 235..295 CDD:290566 14/60 (23%)
leucine-rich repeat 237..260 CDD:275380 7/23 (30%)
leucine-rich repeat 261..284 CDD:275380 7/22 (32%)
LRR_8 283..345 CDD:290566 8/61 (13%)
leucine-rich repeat 285..308 CDD:275380 1/22 (5%)
leucine-rich repeat 309..334 CDD:275380 2/24 (8%)
LRR_8 334..393 CDD:290566 20/62 (32%)
leucine-rich repeat 335..358 CDD:275380 11/23 (48%)
leucine-rich repeat 359..382 CDD:275380 7/25 (28%)
LRR_8 382..441 CDD:290566 17/60 (28%)
leucine-rich repeat 383..406 CDD:275380 3/22 (14%)
leucine-rich repeat 407..430 CDD:275380 8/23 (35%)
LRR_8 431..488 CDD:290566 19/59 (32%)
leucine-rich repeat 431..451 CDD:275380 8/20 (40%)
leucine-rich repeat 454..477 CDD:275380 6/24 (25%)
LRR_8 477..559 CDD:290566 25/83 (30%)
leucine-rich repeat 478..499 CDD:275380 7/21 (33%)
leucine-rich repeat 502..525 CDD:275380 8/23 (35%)
leucine-rich repeat 526..548 CDD:275380 5/21 (24%)
leucine-rich repeat 590..617 CDD:275380 7/31 (23%)
leucine-rich repeat 618..641 CDD:275380 6/32 (19%)
leucine-rich repeat 642..689 CDD:275380 12/58 (21%)
LRRCT 679..736 CDD:214507 21/82 (26%)
leucine-rich repeat 775..796 CDD:275380 2/20 (10%)
LRR_8 797..852 CDD:290566 17/106 (16%)
leucine-rich repeat 797..817 CDD:275380 7/44 (16%)
leucine-rich repeat 818..841 CDD:275380 7/49 (14%)
LRR_8 841..900 CDD:290566 20/61 (33%)
leucine-rich repeat 842..865 CDD:275380 6/22 (27%)
LRR_4 866..907 CDD:289563 15/44 (34%)
leucine-rich repeat 866..889 CDD:275380 7/25 (28%)
leucine-rich repeat 890..911 CDD:275380 7/17 (41%)
TIR 1045..1183 CDD:214587
RLP41NP_001327885.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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