DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and RLP32

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_187216.1 Gene:RLP32 / 819732 AraportID:AT3G05650 Length:868 Species:Arabidopsis thaliana


Alignment Length:914 Identity:209/914 - (22%)
Similarity:341/914 - (37%) Gaps:240/914 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 LESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAE 185
            ||..:|:....|..::....|.||...:| ...:|:.....:|:.|:..|.::|.|..:|     
plant    41 LEQRDALLELKKEFKIKKPCFDGLHPTTE-SWANNSDCCYWDGITCNDKSGEVLELDLSR----- 99

  Fly   186 FLGFSEKLCAGSAL-SNAN-GAVSGGSELQTLDVSFNELR-SLPDAWGASRLRRLQTLSLQHNNI 247
                   .|..|.. ||:: ..|.....|.|||:|:|... .:|..  ......|.||.|..|..
plant   100 -------SCLQSRFHSNSSLFTVLNLRFLTTLDLSYNYFSGQIPSC--IENFSHLTTLDLSKNYF 155

  Fly   248 STLAPNALAGLSSLRVLNISYNHLV-SLPSEAFAGN-KELRELHLQGNDLYEL-PKGLLHRLEQL 309
            |...|:::..||.|..|::|.|..| .:|   |.|| .:|..|::..|||..: |..||: |:.|
plant   156 SGGIPSSIGNLSQLTFLDLSGNEFVGEMP---FFGNMNQLTNLYVDSNDLTGIFPLSLLN-LKHL 216

  Fly   310 LVLDLSGNQLTSHHVDN--------------STFAG--------LIRLIVLNLSNNALTRIGSKT 352
            ..|.||.||.|.....|              :.|.|        :..|..:||.||.|.  |:..
plant   217 SDLSLSRNQFTGTLPSNMSSLSNLEYFEAWGNAFTGTLPSSLFTIASLTSINLRNNQLN--GTLE 279

  Fly   353 FKEL---YFLQILDMRNNS-IGHIEEGAFLPLYNLHTLNLAE-NRLHTLDNRIFNGLYVLTKLTL 412
            |..:   ..|.:||:.||: ||.|.: :.....||..|:|:. |....:|..||..|..|..|.|
plant   280 FGNISSPSTLTVLDISNNNFIGPIPK-SISKFINLQDLDLSHLNTQGPVDFSIFTNLKSLQLLNL 343

  Fly   413 NN-NLVSIVESQAF--RNCSDLKELDLSSNQLTEVPE-AVQD---LSMLKTLDLGENQISEFKNN 470
            :: |..:.::..|.  .:.:.:..:|||.|.::...: :|.|   ..::..|.|....|:||. .
plant   344 SHLNTTTTIDLNALFSSHLNSIYSMDLSGNHVSATTKISVADHHPTQLISQLYLSGCGITEFP-E 407

  Fly   471 TFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGA------FDKNTEIEAI 529
            ..|:.:::|.|.:.:|:|.....|....||:|..::|:.|.....||..      ..|.:....:
plant   408 LLRSQHKMTNLDISNNKIKGQVPGWLWTLPKLIFVDLSNNIFTGFERSTEHGLSLITKPSMQYLV 472

  Fly   530 RLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEI 594
            ..:.||...|......|.||:.|:||:|:|                 :|:....:||.     :.
plant   473 GSNNNFTGKIPSFICALRSLITLDLSDNNL-----------------NGSIPPCMGNL-----KS 515

  Fly   595 RVTTLDASHNRITEIGAMSVPNSIELLFI-NNNIIGQIQANTFVDKTRLARVDLYANVLSKISLN 658
            .::.|:...||:......|:..|:..|.: :|.::|::..                   |.|.|:
plant   516 TLSFLNLRQNRLGGGLPRSIFKSLRSLDVGHNQLVGKLPR-------------------SFIRLS 561

  Fly   659 ALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLR 723
            ||.|..|...:....|     ||       ||..:..|              :.|:..|.:    
plant   562 ALEVLNVENNRINDTF-----PF-------WLSSLKKL--------------QVLVLRSNA---- 596

  Fly   724 PLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWAT-NIVDCGRQDLA-AL 786
                           .|.|                       .|.|::.| .|::......: .|
plant   597 ---------------FHGP-----------------------IHHASFHTLRIINLSHNQFSGTL 623

  Fly   787 PNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNAS------NLMTLQNGSLAQLVNL--- 842
            |       ::.:::.|.|..|    :......:..|:..|      :::.:..|...:||.:   
plant   624 P-------ANYFVNWNAMSSL----MATEDRSQEKYMGDSFRYYHDSVVLMNKGLEMELVRILKI 677

  Fly   843 -RVLHLENNKLTALEGTEFRSLGLLRELY---LHNNMLTHISNATFEPLVSLEVLRLDNNRLSS- 902
             ..|....||   |||...||:|||:||:   |.:|..|....::...|..||.|.:..|:||. 
plant   678 YTALDFSENK---LEGEIPRSIGLLKELHVLNLSSNAFTGHIPSSMGNLRELESLDVSQNKLSGE 739

  Fly   903 ----------LPHLQYRHS-LQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIY------ 950
                      |.::.:.|: |.||..|.             .||...|....:|...:|      
plant   740 IPQELGNLSYLAYMNFSHNQLGGLVPGG-------------TQFRRQNCSSFKDNPGLYGSSLEE 791

  Fly   951 -CLD 953
             |||
plant   792 VCLD 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566 14/59 (24%)
leucine-rich repeat 116..146 CDD:275380 7/24 (29%)
leucine-rich repeat 147..170 CDD:275380 4/22 (18%)
leucine-rich repeat 171..201 CDD:275380 5/30 (17%)
LRR_RI 210..464 CDD:238064 82/291 (28%)
leucine-rich repeat 212..236 CDD:275380 7/24 (29%)
LRR_8 235..295 CDD:290566 21/61 (34%)
leucine-rich repeat 237..260 CDD:275380 8/22 (36%)
leucine-rich repeat 261..284 CDD:275380 9/24 (38%)
LRR_8 283..345 CDD:290566 24/84 (29%)
leucine-rich repeat 285..308 CDD:275380 9/23 (39%)
leucine-rich repeat 309..334 CDD:275380 10/46 (22%)
LRR_8 334..393 CDD:290566 21/63 (33%)
leucine-rich repeat 335..358 CDD:275380 8/25 (32%)
leucine-rich repeat 359..382 CDD:275380 8/23 (35%)
LRR_8 382..441 CDD:290566 18/62 (29%)
leucine-rich repeat 383..406 CDD:275380 8/23 (35%)
leucine-rich repeat 407..430 CDD:275380 5/25 (20%)
LRR_8 431..488 CDD:290566 15/60 (25%)
leucine-rich repeat 431..451 CDD:275380 6/23 (26%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
LRR_8 477..559 CDD:290566 23/87 (26%)
leucine-rich repeat 478..499 CDD:275380 5/20 (25%)
leucine-rich repeat 502..525 CDD:275380 6/28 (21%)
leucine-rich repeat 526..548 CDD:275380 4/21 (19%)
leucine-rich repeat 590..617 CDD:275380 4/26 (15%)
leucine-rich repeat 618..641 CDD:275380 3/23 (13%)
leucine-rich repeat 642..689 CDD:275380 10/46 (22%)
LRRCT 679..736 CDD:214507 7/56 (13%)
leucine-rich repeat 775..796 CDD:275380 3/21 (14%)
LRR_8 797..852 CDD:290566 10/64 (16%)
leucine-rich repeat 797..817 CDD:275380 3/19 (16%)
leucine-rich repeat 818..841 CDD:275380 4/28 (14%)
LRR_8 841..900 CDD:290566 21/65 (32%)
leucine-rich repeat 842..865 CDD:275380 8/26 (31%)
LRR_4 866..907 CDD:289563 14/54 (26%)
leucine-rich repeat 866..889 CDD:275380 7/25 (28%)
leucine-rich repeat 890..911 CDD:275380 7/31 (23%)
TIR 1045..1183 CDD:214587
RLP32NP_187216.1 LRRNT_2 42..86 CDD:311940 9/44 (20%)
PLN00113 70..>787 CDD:331614 198/874 (23%)
leucine-rich repeat 121..144 CDD:275380 7/24 (29%)
leucine-rich repeat 145..168 CDD:275380 8/22 (36%)
leucine-rich repeat 169..191 CDD:275380 9/24 (38%)
leucine-rich repeat 192..215 CDD:275380 9/23 (39%)
leucine-rich repeat 216..263 CDD:275380 10/46 (22%)
leucine-rich repeat 264..288 CDD:275380 8/25 (32%)
leucine-rich repeat 289..312 CDD:275380 8/23 (35%)
leucine-rich repeat 313..337 CDD:275380 8/23 (35%)
leucine-rich repeat 367..390 CDD:275380 6/22 (27%)
leucine-rich repeat 391..414 CDD:275380 6/23 (26%)
leucine-rich repeat 415..438 CDD:275380 6/22 (27%)
leucine-rich repeat 439..467 CDD:275380 6/27 (22%)
leucine-rich repeat 468..491 CDD:275380 4/22 (18%)
leucine-rich repeat 492..515 CDD:275380 9/44 (20%)
leucine-rich repeat 517..538 CDD:275380 4/20 (20%)
leucine-rich repeat 539..562 CDD:275380 6/41 (15%)
leucine-rich repeat 563..586 CDD:275380 8/34 (24%)
leucine-rich repeat 609..636 CDD:275380 5/33 (15%)
leucine-rich repeat 637..701 CDD:275380 17/70 (24%)
leucine-rich repeat 702..725 CDD:275380 5/22 (23%)
leucine-rich repeat 726..749 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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