| Sequence 1: | NP_476814.1 | Gene: | 18w / 37277 | FlyBaseID: | FBgn0004364 | Length: | 1385 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102939.1 | Gene: | Lrrtm2 / 685472 | RGDID: | 1593785 | Length: | 515 | Species: | Rattus norvegicus |
| Alignment Length: | 594 | Identity: | 142/594 - (23%) |
|---|---|---|---|
| Similarity: | 216/594 - (36%) | Gaps: | 188/594 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 224 SLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELREL 288
Fly 289 HLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTF 353
Fly 354 KELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVS 418
Fly 419 IVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRL 483
Fly 484 IDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDING-IFATLA 547
Fly 548 SLLWLNLSENHLVWFDYAFIPSNLKWL-DIHGNYIEAL---GNYYKLQEEIRVTTLDASH----- 603
Fly 604 -NRITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVA---- 663
Fly 664 ------PVSAEKPVPE---------------------FYLGGNPF---EC---------DCSMEW 689
Fly 690 LQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCE 754
Fly 755 CEVICPGNC 763 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 18w | NP_476814.1 | leucine-rich repeat | 66..91 | CDD:275380 | |
| leucine-rich repeat | 92..115 | CDD:275380 | |||
| LRR_8 | 115..181 | CDD:290566 | |||
| leucine-rich repeat | 116..146 | CDD:275380 | |||
| leucine-rich repeat | 147..170 | CDD:275380 | |||
| leucine-rich repeat | 171..201 | CDD:275380 | |||
| LRR_RI | 210..464 | CDD:238064 | 67/239 (28%) | ||
| leucine-rich repeat | 212..236 | CDD:275380 | 4/11 (36%) | ||
| LRR_8 | 235..295 | CDD:290566 | 20/59 (34%) | ||
| leucine-rich repeat | 237..260 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 261..284 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 283..345 | CDD:290566 | 25/61 (41%) | ||
| leucine-rich repeat | 285..308 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 309..334 | CDD:275380 | 13/24 (54%) | ||
| LRR_8 | 334..393 | CDD:290566 | 12/58 (21%) | ||
| leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 359..382 | CDD:275380 | 3/22 (14%) | ||
| LRR_8 | 382..441 | CDD:290566 | 13/58 (22%) | ||
| leucine-rich repeat | 383..406 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 407..430 | CDD:275380 | 0/22 (0%) | ||
| LRR_8 | 431..488 | CDD:290566 | 15/56 (27%) | ||
| leucine-rich repeat | 431..451 | CDD:275380 | 9/19 (47%) | ||
| leucine-rich repeat | 454..477 | CDD:275380 | 2/22 (9%) | ||
| LRR_8 | 477..559 | CDD:290566 | 26/82 (32%) | ||
| leucine-rich repeat | 478..499 | CDD:275380 | 9/20 (45%) | ||
| leucine-rich repeat | 502..525 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 526..548 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 590..617 | CDD:275380 | 10/32 (31%) | ||
| leucine-rich repeat | 618..641 | CDD:275380 | 3/22 (14%) | ||
| leucine-rich repeat | 642..689 | CDD:275380 | 14/89 (16%) | ||
| LRRCT | 679..736 | CDD:214507 | 13/68 (19%) | ||
| leucine-rich repeat | 775..796 | CDD:275380 | |||
| LRR_8 | 797..852 | CDD:290566 | |||
| leucine-rich repeat | 797..817 | CDD:275380 | |||
| leucine-rich repeat | 818..841 | CDD:275380 | |||
| LRR_8 | 841..900 | CDD:290566 | |||
| leucine-rich repeat | 842..865 | CDD:275380 | |||
| LRR_4 | 866..907 | CDD:289563 | |||
| leucine-rich repeat | 866..889 | CDD:275380 | |||
| leucine-rich repeat | 890..911 | CDD:275380 | |||
| TIR | 1045..1183 | CDD:214587 | |||
| Lrrtm2 | NP_001102939.1 | LRR 1 | 61..83 | 8/25 (32%) | |
| leucine-rich repeat | 66..86 | CDD:275380 | 8/19 (42%) | ||
| LRR_RI | 73..311 | CDD:238064 | 85/310 (27%) | ||
| LRR 2 | 84..107 | 6/22 (27%) | |||
| LRR_8 | 85..145 | CDD:290566 | 21/59 (36%) | ||
| leucine-rich repeat | 87..110 | CDD:275380 | 6/22 (27%) | ||
| LRR 3 | 109..131 | 7/21 (33%) | |||
| leucine-rich repeat | 111..134 | CDD:275380 | 8/22 (36%) | ||
| LRR 4 | 132..155 | 12/24 (50%) | |||
| LRR_8 | 134..193 | CDD:290566 | 25/84 (30%) | ||
| leucine-rich repeat | 135..158 | CDD:275380 | 13/24 (54%) | ||
| LRR 5 | 156..179 | 8/22 (36%) | |||
| leucine-rich repeat | 159..182 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 181..241 | CDD:290566 | 26/130 (20%) | ||
| LRR 6 | 181..203 | 9/45 (20%) | |||
| leucine-rich repeat | 183..206 | CDD:275380 | 11/70 (16%) | ||
| LRR 7 | 205..227 | 10/68 (15%) | |||
| leucine-rich repeat | 207..230 | CDD:275380 | 11/45 (24%) | ||
| LRR 8 | 229..251 | 9/21 (43%) | |||
| leucine-rich repeat | 231..254 | CDD:275380 | 9/22 (41%) | ||
| LRR 9 | 252..275 | 7/22 (32%) | |||
| LRR_8 | 253..312 | CDD:290566 | 17/60 (28%) | ||
| leucine-rich repeat | 255..278 | CDD:275380 | 7/22 (32%) | ||
| LRR 10 | 276..299 | 4/22 (18%) | |||
| leucine-rich repeat | 279..300 | CDD:275380 | 4/20 (20%) | ||
| Involved in DLG4-binding | 512..515 | 1/2 (50%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||