DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC572462

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_073768828.1 Gene:LOC572462 / 572462 -ID:- Length:896 Species:Danio rerio


Alignment Length:1173 Identity:261/1173 - (22%)
Similarity:411/1173 - (35%) Gaps:409/1173 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LTTMDIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQELLHASELAPGLFRQLQKLSELRIDAC 100
            |:..||:..:|      |.|.:|        |:|....:|.....|||..|.:...|..|:|..|
Zfish    58 LSVTDIKEDLR------GLPTNL--------LNLLVQMDLHFHGVLAPNSFSRFGSLENLKIAGC 108

  Fly   101 KLQRVPPNAFEGLMSLKRLT---LESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPE 162
             ...:||.||.||.::..||   |:|.|.       .|: ...|..|..|:.|.:..:::..|..
Zfish   109 -FSEIPPEAFNGLTNVTSLTITALDSKNC-------CEV-ALDFSHLPSLTSLFISHHDLSLLAL 164

  Fly   163 GVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPD 227
            .|:..:|.||.|.|....::.     .|:.||   .|:|               |...:|.||.|
Zfish   165 NVFEKIPHLQWLYLDSVCLKD-----LSDVLC---RLAN---------------VKLLKLFSLDD 206

  Fly   228 AWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQG 292
             |         .:.||:.|.|......::...|:..:::....|..:...||....:|..||...
Zfish   207 -W---------NIRLQYQNCSVFNTTDISTEFSIETVDLLLGKLEHIDEGAFKPFGKLSLLHFSV 261

  Fly   293 ND---LYELPKGLLHRLEQL-LVLDLSGNQLTSHHVDNSTFAGLIRLI--------VLNLSNNAL 345
            ::   |.:|....:|::.:: .::|:.       :||:...|..:..:        .:|||   |
Zfish   262 SNTDFLEDLSLIGVHQISKISAIVDVL-------NVDDLCVAAKLYSVKSVDVYYKTINLS---L 316

  Fly   346 TRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDN----RIFNGLYV 406
            |..||...||             ||:|                      ||:|    .|.|.|.|
Zfish   317 TSKGSVGCKE-------------IGYI----------------------TLENDISREIVNLLDV 346

  Fly   407 LTKLTLNNNLVS------IVESQAFRN-CS----DLKELDLSSNQLTEVPEAVQDLSM----LKT 456
            .:...:.:||.|      ::.|..|:: |:    ::|:|.....|...:.:.|....|    |||
Zfish   347 NSVFQIFSNLTSAAIYRHVLRSNDFQSLCASYPQNVKQLINMVLQTIRIDKIVSHQFMCFVNLKT 411

  Fly   457 LDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFD 521
            |.|..::||.|::..|..||:|..|.|..|:|.:|....|..|..|.||:|.:|.|..||..:|.
Zfish   412 LKLVMSKISVFEDFAFIGLNKLKELNLHRNKISSIHRHTFSGLHELRVLDLQENPIIYIEPKSFG 476

  Fly   522 KNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGN 586
            ..|.:.:.     .|.|:|  |....||:.|:||                   ||.|        
Zfish   477 HFTNLSSF-----LLGDLN--FPPNMSLIKLHLS-------------------DIFG-------- 507

  Fly   587 YYKLQEEIRVTTLDASHNRITEIGAMSVPNSIELLFINNN------IIGQIQANTFVDKTRLARV 645
                                      .:|.::..:||::.      :||   :||.::       
Zfish   508 --------------------------VIPYNLSNVFISSGLRPMHLVIG---SNTTLN------- 536

  Fly   646 DLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNI 710
                        |.|.: .:..:..:.|          ||        |:|              
Zfish   537 ------------NGLNL-HIKGQYVIVE----------DC--------NSL-------------- 556

  Fly   711 ECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNI 775
                             |..|.|..:.::         .|..||.|.|                 
Zfish   557 -----------------LLTSVFTLQIQA---------AYMICENEFI----------------- 578

  Fly   776 VDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLA--Q 838
               |:.    :|:.:..:...::.|  |:.:|.|  :....:|:.|.|...:|..|.|..:.  .
Zfish   579 ---GKY----VPSVVSLEFQSMFSD--NIGDLSV--INQLVHLKTLKLEKLDLTNLPNMDIMFHN 632

  Fly   839 LVNLRVLHLENNKLTALEGTEFRSLGLLRELYL-----HNNMLTHISNATFEPLVSLEVLRLDNN 898
            |..|..|.|.|.||..|:|:..:.|..|.:|.|     .|.:.|.:.:.|....|.||.|.|   
Zfish   633 LTKLETLILANCKLFFLDGSLTKDLKALTKLGLIPKDTVNILQTFVDHLTQLRFVYLEDLDL--- 694

  Fly   899 RLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELI 963
                                    .|.|           |||.:|....|        .|::|::
Zfish   695 ------------------------YCSC-----------DNAWLVSWIRD--------NRKVEVV 716

  Fly   964 GNLANGPDCSDLLDASASNIS--------SSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFV---- 1016
            .:..:..|...|.|....:||        .|.||  .:.....::|.:.||:||||:..||    
Zfish   717 MSNPSMQDLKCLTDNEVDHISFVSYVTENCSFDL--DFVFFACSSVFLCIFIVVVLMYKFVGQYF 779

  Fly  1017 ----------FRESVRMWLFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGR 1071
                      |||:.||.....|              .|||.:.:|.||..:|...:...||...
Zfish   780 KPFYHIASGWFREAFRMKEKQQY--------------RYDAFVSYSSKDEHWVIEELLPNLEQRG 830

  Fly  1072 PPF-RLCIQQRDLPPQASHLQLVEGAR----ASRKIILVLTRNLLATEWNRIEFRNAFHESLRGL 1131
            ||| |||:..||.  |..| .:||...    |||:.:.:::||.|.:.|..:|.:.|.:....|.
Zfish   831 PPFLRLCLHSRDF--QLGH-DIVENITDSIYASRRTLCLVSRNYLNSNWCSVEMQLATYRLQTGP 892

  Fly  1132 AQK 1134
            |.|
Zfish   893 AGK 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 7/24 (29%)
leucine-rich repeat 92..115 CDD:275380 10/22 (45%)
LRR_8 115..181 CDD:404697 17/68 (25%)
leucine-rich repeat 116..146 CDD:275380 8/32 (25%)
leucine-rich repeat 147..170 CDD:275380 4/22 (18%)
leucine-rich repeat 171..201 CDD:275380 8/29 (28%)
LRR 210..592 CDD:443914 95/412 (23%)
leucine-rich repeat 212..236 CDD:275380 6/23 (26%)
leucine-rich repeat 237..260 CDD:275380 4/22 (18%)
leucine-rich repeat 261..284 CDD:275380 3/22 (14%)
leucine-rich repeat 285..308 CDD:275380 6/25 (24%)
leucine-rich repeat 309..334 CDD:275380 4/25 (16%)
leucine-rich repeat 335..358 CDD:275380 9/30 (30%)
leucine-rich repeat 359..382 CDD:275380 3/22 (14%)
leucine-rich repeat 383..406 CDD:275380 6/26 (23%)
leucine-rich repeat 407..430 CDD:275380 6/33 (18%)
leucine-rich repeat 431..451 CDD:275380 4/19 (21%)
leucine-rich repeat 454..477 CDD:275380 10/22 (45%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
leucine-rich repeat 526..548 CDD:275380 4/21 (19%)
leucine-rich repeat 590..617 CDD:275380 1/26 (4%)
leucine-rich repeat 618..641 CDD:275380 6/28 (21%)
leucine-rich repeat 642..689 CDD:275380 5/46 (11%)
LRRCT 679..736 CDD:214507 7/56 (13%)
LRR <775..>920 CDD:443914 33/151 (22%)
leucine-rich repeat 775..796 CDD:275380 2/20 (10%)
leucine-rich repeat 797..817 CDD:275380 4/19 (21%)
leucine-rich repeat 818..841 CDD:275380 7/24 (29%)
leucine-rich repeat 842..865 CDD:275380 9/22 (41%)
leucine-rich repeat 866..889 CDD:275380 6/27 (22%)
leucine-rich repeat 890..911 CDD:275380 4/20 (20%)
TIR 1045..1183 CDD:214587 33/95 (35%)
LOC572462XP_073768828.1 None

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