DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and Tlr5

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017177186.1 Gene:Tlr5 / 53791 MGIID:1858171 Length:873 Species:Mus musculus


Alignment Length:1055 Identity:235/1055 - (22%)
Similarity:367/1055 - (34%) Gaps:360/1055 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 NIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFN 220
            |:.|:|   |       :||.|..|                                  |.:|||
Mouse    51 NLTQIP---W-------ILNTTTER----------------------------------LLLSFN 71

  Fly   221 ELRSLPDAWGASRLRRLQTLSL--QHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNK 283
            .: |:..|.....|.|||.|.|  |:.|: |:.|.|...|.:||:|::..:.:..|..:||.|..
Mouse    72 YI-SMVVATSFPLLERLQLLELGTQYANL-TIGPGAFRNLPNLRILDLGQSQIEVLNRDAFQGLP 134

  Fly   284 ELRELHLQGNDLYE--LPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALT 346
            .|.||.|....|..  |..|....|..|..|||||||:.|..: :|:|..|..|..:|.:.|.:.
Mouse   135 HLLELRLFSCGLSSAVLSDGYFRNLYSLARLDLSGNQIHSLRL-HSSFRELNSLSDVNFAFNQIF 198

  Fly   347 RIGSKTFKEL-------YFLQILDMRNN-SIGHIEEGAFLPL--YNLHTLNLAENRLHTLD-NRI 400
            .|.....:.|       :.|::..:.:. |:|.  |....|.  ..|.||:|:||. .|:| .|.
Mouse   199 TICEDELEPLQGKTLSFFGLKLTKLFSRVSVGW--ETCRNPFRGVRLETLDLSENG-WTVDITRN 260

  Fly   401 FNGLY---VLTKLTLNNNLVSIVESQAFRNCSD-------------LKELDLSSNQLTEV-PEAV 448
            |:.:.   .::.|.|.::::.  ....|:|..|             :.:||||...:..: |...
Mouse   261 FSNIIQGSQISSLILKHHIMG--PGFGFQNIRDPDQSTFASLARSSVLQLDLSHGFIFSLNPRLF 323

  Fly   449 QDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQ 513
            ..|..||.|:|..|:|::...|.|..|:.|..|.|..|.:|.:....|..|||::.::|.:|.|.
Mouse   324 GTLKDLKMLNLAFNKINKIGENAFYGLDSLQVLNLSYNLLGELYNSNFYGLPRVAYVDLQRNHIG 388

  Fly   514 SIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHG 578
            .|:...|.....::.:.|..|.|..| |...::..:|   |..|.||...:....:|  :|::..
Mouse   389 IIQDQTFRLLKTLQTLDLRDNALKAI-GFIPSIQMVL---LGGNKLVHLPHIHFTAN--FLELSE 447

  Fly   579 NYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPN---SIELLFINNNIIGQIQANTFVDKT 640
            |.:|.|.:.|.|....::..|..:.||::...|...|:   |:|.||:..|::            
Mouse   448 NRLENLSDLYFLLRVPQLQFLILNQNRLSSCKAAHTPSENPSLEQLFLTENML------------ 500

  Fly   641 RLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVV 705
            :||                                                              
Mouse   501 QLA-------------------------------------------------------------- 503

  Fly   706 DLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDAT 770
                                                                             
Mouse   504 ----------------------------------------------------------------- 503

  Fly   771 WATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGS 835
            |.|.:  |             .||                 ..|...|:.|||:.:.|..|..|.
Mouse   504 WETGL--C-------------WDV-----------------FQGLSRLQILYLSNNYLNFLPPGI 536

  Fly   836 LAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRL 900
            ...||.||:|.|..||||.|      |.|.|.                    .:||:|.:..|:|
Mouse   537 FNDLVALRMLSLSANKLTVL------SPGSLP--------------------ANLEILDISRNQL 575

  Fly   901 SSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVS----DNAMVVRDAHDIYCLDAGIKRELE 961
            .| |......||:.|.:..|.:.|.|    ||:.|:|    .|..:.....|:||:..       
Mouse   576 FS-PDPALFSSLRVLDITHNEFVCNC----ELSTFISWLNQTNVTLFGSPADVYCMYP------- 628

  Fly   962 LIGNLANGPDCSDLLDASASNISSS--------QDLAGGYRLPLLAAVLVLIFLVVVLIIV---- 1014
                       :.||..|..|||:.        :.|.  :.|.:|..|.:.:|||:.|:::    
Mouse   629 -----------NSLLGGSLYNISTEDCDEEEAMRSLK--FSLFILCTVTLTLFLVITLVVIKFRG 680

  Fly  1015 -----------FVFRESVRMWLFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELE 1068
                       .||::.|  |            ..|.....|||....|.||:|:....:...|:
Mouse   681 ICFLCYKTIQKLVFKDKV--W------------SLEPGAYRYDAYFCFSSKDFEWAQNALLKHLD 731

  Fly  1069 ---HGRPPFRLCIQQRDLPPQASHLQLVEGA-RASRKIILVLTRNLLATEWNRIEFRNAFHESLR 1129
               ..|...|||.::||..|..:|:..::.| ..|||.:.:::|:.|...|....||.|...||.
Mouse   732 AHYSSRNRLRLCFEERDFIPGENHISNIQAAVWGSRKTVCLVSRHFLKDGWCLEAFRYAQSRSLS 796

  Fly  1130 GLAQKLVIIEETSVS 1144
            .|...|:::...|:|
Mouse   797 DLKSILIVVVVGSLS 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566 7/24 (29%)
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380 4/13 (31%)
leucine-rich repeat 171..201 CDD:275380 4/29 (14%)
LRR_RI 210..464 CDD:238064 81/285 (28%)
leucine-rich repeat 212..236 CDD:275380 7/23 (30%)
LRR_8 235..295 CDD:290566 22/61 (36%)
leucine-rich repeat 237..260 CDD:275380 10/24 (42%)
leucine-rich repeat 261..284 CDD:275380 7/22 (32%)
LRR_8 283..345 CDD:290566 23/63 (37%)
leucine-rich repeat 285..308 CDD:275380 8/24 (33%)
leucine-rich repeat 309..334 CDD:275380 12/24 (50%)
LRR_8 334..393 CDD:290566 16/68 (24%)
leucine-rich repeat 335..358 CDD:275380 5/29 (17%)
leucine-rich repeat 359..382 CDD:275380 5/25 (20%)
LRR_8 382..441 CDD:290566 19/75 (25%)
leucine-rich repeat 383..406 CDD:275380 10/26 (38%)
leucine-rich repeat 407..430 CDD:275380 4/22 (18%)
LRR_8 431..488 CDD:290566 19/57 (33%)
leucine-rich repeat 431..451 CDD:275380 5/20 (25%)
leucine-rich repeat 454..477 CDD:275380 9/22 (41%)
LRR_8 477..559 CDD:290566 22/81 (27%)
leucine-rich repeat 478..499 CDD:275380 6/20 (30%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 5/21 (24%)
leucine-rich repeat 590..617 CDD:275380 6/29 (21%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 2/46 (4%)
LRRCT 679..736 CDD:214507 0/56 (0%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
LRR_8 797..852 CDD:290566 15/54 (28%)
leucine-rich repeat 797..817 CDD:275380 1/19 (5%)
leucine-rich repeat 818..841 CDD:275380 8/22 (36%)
LRR_8 841..900 CDD:290566 16/58 (28%)
leucine-rich repeat 842..865 CDD:275380 10/22 (45%)
LRR_4 866..907 CDD:289563 8/40 (20%)
leucine-rich repeat 866..889 CDD:275380 1/22 (5%)
leucine-rich repeat 890..911 CDD:275380 7/20 (35%)
TIR 1045..1183 CDD:214587 32/104 (31%)
Tlr5XP_017177186.1 leucine-rich repeat 63..93 CDD:275380 12/64 (19%)
LRR_8 <101..146 CDD:338972 14/44 (32%)
leucine-rich repeat 112..135 CDD:275380 7/22 (32%)
leucine-rich repeat 136..161 CDD:275380 8/24 (33%)
leucine-rich repeat 162..186 CDD:275380 12/24 (50%)
leucine-rich repeat 187..242 CDD:275380 10/56 (18%)
leucine-rich repeat 243..304 CDD:275380 15/63 (24%)
leucine-rich repeat 305..328 CDD:275380 6/22 (27%)
LRR_8 308..363 CDD:338972 19/54 (35%)
leucine-rich repeat 329..352 CDD:275380 9/22 (41%)
LRR_8 352..411 CDD:338972 16/58 (28%)
leucine-rich repeat 353..376 CDD:275380 7/22 (32%)
leucine-rich repeat 377..400 CDD:275380 5/22 (23%)
PRK15370 <397..>597 CDD:185268 67/403 (17%)
leucine-rich repeat 401..429 CDD:275380 7/31 (23%)
leucine-rich repeat 430..464 CDD:275380 9/35 (26%)
leucine-rich repeat 465..489 CDD:275380 5/23 (22%)
leucine-rich repeat 490..518 CDD:275380 12/198 (6%)
leucine-rich repeat 519..542 CDD:275380 8/22 (36%)
leucine-rich repeat 543..561 CDD:275380 11/23 (48%)
leucine-rich repeat 565..585 CDD:275380 7/20 (35%)
PCC 569..>647 CDD:188093 24/100 (24%)
TIR 708..858 CDD:366714 32/104 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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