DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and CG7896

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster


Alignment Length:1571 Identity:355/1571 - (22%)
Similarity:590/1571 - (37%) Gaps:449/1571 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLLLVADAH------AQQQCNWQYGLTTMDIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQEL 75
            ||||...||      |.:.|........:..||:|... :.||         ..|.:.:.|.:.:
  Fly    15 LLLLACIAHLGHPILAWRPCPELSPALRLPCRCNVVPF-AATG---------QLGAVAMDCDRVV 69

  Fly    76 LHASELAPGL-----------------------FRQLQ-KLSELRIDACKLQRVPPNAFEGLM-S 115
            .|..  ||.|                       |.||: .:.||.:....::|:|..||:||. |
  Fly    70 FHGD--APQLPYGAPIVAYTQRHSGQQVLPAQTFGQLKLTIEELDLSYNLIRRIPEKAFDGLKDS 132

  Fly   116 LKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNR 180
            |..|.|.::           |.|.:...:...:|||:               :.:|:||:|:.|:
  Fly   133 LNELRLANN-----------LLGDNLNPIFSTAELHV---------------LKNLRLLDLSGNK 171

  Fly   181 IRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLP--DAWGASRLRRLQTLSLQ 243
            |:..|                 .|.:.|..:|:...:..|.|.|:|  ...|.|.||.   |||:
  Fly   172 IKLIE-----------------EGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRH---LSLR 216

  Fly   244 HNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQ 308
            .|.|.:|..::......|.::::.:|.:.|:.|.||.|.:::||:.|.||.:..|...:..:|:.
  Fly   217 QNQIGSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQS 281

  Fly   309 LLVLDLSGN-------------------QLTSHHVD--NSTFAGLIR-LIVLNLSNNALTRIGSK 351
            |..||||.|                   .|:|:.:.  :.|...::| |..|::|.|.:|.|...
  Fly   282 LQKLDLSENFFGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPG 346

  Fly   352 TFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNL 416
            ||:|:..|:.||:..||:..||:.|...|.:|.||.:.:|.:..:.......|..||.|.|:.|.
  Fly   347 TFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNR 411

  Fly   417 VSIVESQAFRN--CSDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNTFRNL-NQ 477
            |:.:.::...:  ..|:..|.||.|.:.|:|. :.|..|.|.||||..|.::....:||..| :.
  Fly   412 VAALSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLEST 476

  Fly   478 LTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDING- 541
            |..|:|..||:..:. |....||.|..|:|:.|.:..:....|::...::::.|..|.||.:.| 
  Fly   477 LMALKLSQNRLTGLG-GAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGA 540

  Fly   542 IFATLASLLWLNLSENHL--VWFDYAFIPSNLKWLDIHGNYIEAL--GNYYKLQEEIRVTTLDAS 602
            :|..|..|..::||..::  :..|......:||.:.::.|.::.|  |::..|.   .::::|.|
  Fly   541 LFKPLDRLQVIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLW---NISSIDLS 602

  Fly   603 HNRITEIGAMSVPNSIEL--LFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAP- 664
            :|||..|.:.:..|.::|  |.::.|.:...:...|...|.:..:|:..|.||.:..::.|:.| 
  Fly   603 NNRIGSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPR 667

  Fly   665 ---VSAEKPVPEFYLGGNPFECDCSMEWLQRI----NNLTTRQHPHVVDLGNIECLMPHSRSAPL 722
               :.|......|:    |.|...::::|:.|    |.|.|.:......|..:..|         
  Fly   668 LREIRAANNKFSFF----PAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVL--------- 719

  Fly   723 RPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALP 787
              |.:.:..|.|.:                           ..||::| ...|:|....:|..:.
  Fly   720 --LVANNQLDMVSE---------------------------MAFHNST-QLQILDLAHNNLDRIG 754

  Fly   788 NRIPQD---VSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQ----------- 838
            .|..:.   :..|.|:||.:.||..|           ....:.|..|:|.:||.           
  Fly   755 ERTFEGLVRLEQLNLEGNRLSELSDG-----------VFERTKLQMLENINLAHNRFEYAPLNAL 808

  Fly   839 --------------------------LVNLRVLHLENNKLT-----------------ALEGTEF 860
                                      :||::.:.|..|.|:                 :|.||..
  Fly   809 QRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNEPKTVRELSLAGTGI 873

  Fly   861 RSLGLLRE-----LYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRN 920
            .:|.||..     |.|.:|.|.::....|:.:..||.|.|.:|:|.||..|..            
  Fly   874 ENLELLETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSM------------ 926

  Fly   921 AWSCRCQQLRELAQF-VSDNAMVVRDAHDIYCLDAGIKRELELIGN--LANGPDCSDLLDASASN 982
            ||    .||:.|... ||:|:..:....:.        .:||::.:  |::.|.|:.:...:...
  Fly   927 AW----PQLQVLQSLDVSNNSFEIVSQSNF--------GKLEMLRSLRLSHLPQCTRIEKNAFKQ 979

  Fly   983 ISSSQDLAGGYRLPLLA-----AVLVLIFLVVVLIIVF----VFRESVRMWLFAHYGVRVCEPRF 1038
            :.:...|. .|.||||.     .:|.|:..:.||.|..    :..|.::         .:..||.
  Fly   980 LPNLVSLE-AYDLPLLGYLDLQGILELLPGLEVLDIEVKDSSIGSEQIQ---------PLKHPRL 1034

  Fly  1039 EDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRD-----LP-------PQASHLQ 1091
            :..|...|.:            ::|::....|.....|.:|.|:     ||       |::|||.
  Fly  1035 KSLGIRGDRL------------KSISSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLS 1087

  Fly  1092 L-VEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVI-------IEETSVSAEAE 1148
            | |||::     |.||....|    |.:|.|.|..: |:|||...::       :.....|:...
  Fly  1088 LNVEGSK-----ITVLVPQFL----NALEDRRASLQ-LQGLASNPIVCDCNARALRRWLPSSGMP 1142

  Fly  1149 DVAELSP-YLKSVPSNRL--------LTCDRYFWEKLRYAIPIELSPRGNNYTLDHHERFKQPVS 1204
            ||...|| ||    .||.        ||||.                          .|.....|
  Fly  1143 DVTCASPAYL----LNRKLIEVGDDELTCDA--------------------------RRMTSSTS 1177

  Fly  1205 PGMIFRQAPPPPAYYCTEEMEANYSSATTATP----SPRPTRPGGAARIVDSMPMPMRPPSEHIY 1265
                 |.....|....|.......||:||..|    |..||:|....::....|: |:..|..|.
  Fly  1178 -----RPTASVPHLLKTSSQLVTRSSSTTEEPLIIWSLEPTQPPSLKKMKTKAPL-MKAQSPIIS 1236

  Fly  1266 HS--------------------------IESEYSAYDQHEALSMIPTGLMHQHQQQQLRLHQQQQ 1304
            :.                          :....:.|.|:..:..||.|:       |:..|....
  Fly  1237 NDDTLIIGIVGGVVAFIAILIIIICIIRLRMSNAEYQQNATMIGIPAGM-------QMGAHNAAY 1294

  Fly  1305 QQQQ----QRLLQPQFRAMPQQAIPAPSAPVHLRSGSGLSQASTSTQSTAQASTSAAAAQQQQQQ 1365
            ..:.    .....|.:.|    .:|..:|.:| :|...|||                  :|||||
  Fly  1295 NYKNGAGAALYAVPPYHA----TLPHKAASIH-QSSQNLSQ------------------RQQQQQ 1336

  Fly  1366 QQQQAAGSEAA 1376
            ||||.|.:.||
  Fly  1337 QQQQVAAAAAA 1347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 8/48 (17%)
leucine-rich repeat 92..115 CDD:275380 8/23 (35%)
LRR_8 115..181 CDD:290566 14/65 (22%)
leucine-rich repeat 116..146 CDD:275380 5/29 (17%)
leucine-rich repeat 147..170 CDD:275380 3/22 (14%)
leucine-rich repeat 171..201 CDD:275380 7/29 (24%)
LRR_RI 210..464 CDD:238064 83/280 (30%)
leucine-rich repeat 212..236 CDD:275380 8/25 (32%)
LRR_8 235..295 CDD:290566 19/59 (32%)
leucine-rich repeat 237..260 CDD:275380 6/22 (27%)
leucine-rich repeat 261..284 CDD:275380 7/22 (32%)
LRR_8 283..345 CDD:290566 21/83 (25%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 9/45 (20%)
LRR_8 334..393 CDD:290566 23/59 (39%)
leucine-rich repeat 335..358 CDD:275380 9/22 (41%)
leucine-rich repeat 359..382 CDD:275380 9/22 (41%)
LRR_8 382..441 CDD:290566 16/60 (27%)
leucine-rich repeat 383..406 CDD:275380 5/22 (23%)
leucine-rich repeat 407..430 CDD:275380 6/24 (25%)
LRR_8 431..488 CDD:290566 21/58 (36%)
leucine-rich repeat 431..451 CDD:275380 7/20 (35%)
leucine-rich repeat 454..477 CDD:275380 9/23 (39%)
LRR_8 477..559 CDD:290566 23/82 (28%)
leucine-rich repeat 478..499 CDD:275380 6/20 (30%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 7/22 (32%)
leucine-rich repeat 590..617 CDD:275380 7/26 (27%)
leucine-rich repeat 618..641 CDD:275380 4/24 (17%)
leucine-rich repeat 642..689 CDD:275380 10/50 (20%)
LRRCT 679..736 CDD:214507 12/60 (20%)
leucine-rich repeat 775..796 CDD:275380 4/23 (17%)
LRR_8 797..852 CDD:290566 16/91 (18%)
leucine-rich repeat 797..817 CDD:275380 7/19 (37%)
leucine-rich repeat 818..841 CDD:275380 5/59 (8%)
LRR_8 841..900 CDD:290566 20/80 (25%)
leucine-rich repeat 842..865 CDD:275380 7/39 (18%)
LRR_4 866..907 CDD:289563 14/45 (31%)
leucine-rich repeat 866..889 CDD:275380 6/27 (22%)
leucine-rich repeat 890..911 CDD:275380 9/20 (45%)
TIR 1045..1183 CDD:214587 41/166 (25%)
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 22/88 (25%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
LRR_RI <132..338 CDD:238064 60/251 (24%)
leucine-rich repeat 133..161 CDD:275380 8/53 (15%)
LRR_8 160..220 CDD:290566 22/79 (28%)
leucine-rich repeat 162..185 CDD:275380 9/39 (23%)
leucine-rich repeat 186..209 CDD:275380 6/22 (27%)
leucine-rich repeat 210..233 CDD:275380 8/25 (32%)
LRR_8 232..290 CDD:290566 19/57 (33%)
leucine-rich repeat 234..257 CDD:275380 7/22 (32%)
leucine-rich repeat 258..281 CDD:275380 7/22 (32%)
LRR_RI 273..535 CDD:238064 73/262 (28%)
LRR_8 281..338 CDD:290566 13/56 (23%)
leucine-rich repeat 282..329 CDD:275380 9/46 (20%)
LRR_8 328..388 CDD:290566 23/59 (39%)
leucine-rich repeat 330..353 CDD:275380 9/22 (41%)
leucine-rich repeat 354..377 CDD:275380 9/22 (41%)
leucine-rich repeat 378..401 CDD:275380 5/22 (23%)
leucine-rich repeat 402..425 CDD:275380 6/22 (27%)
leucine-rich repeat 428..451 CDD:275380 7/22 (32%)
LRR_8 429..487 CDD:290566 21/57 (37%)
leucine-rich repeat 452..473 CDD:275380 8/20 (40%)
leucine-rich repeat 477..497 CDD:275378 6/20 (30%)
LRR_8 498..558 CDD:290566 16/59 (27%)
leucine-rich repeat 500..523 CDD:275380 5/22 (23%)
LRR_RI 502..769 CDD:238064 61/312 (20%)
leucine-rich repeat 524..547 CDD:275380 7/22 (32%)
leucine-rich repeat 548..571 CDD:275380 4/22 (18%)
LRR_8 572..630 CDD:290566 16/60 (27%)
leucine-rich repeat 572..595 CDD:275380 6/25 (24%)
leucine-rich repeat 596..619 CDD:275380 7/22 (32%)
LRR_8 619..678 CDD:290566 12/58 (21%)
leucine-rich repeat 620..643 CDD:275380 4/22 (18%)
leucine-rich repeat 644..667 CDD:275380 5/22 (23%)
LRR_8 666..726 CDD:290566 13/74 (18%)
leucine-rich repeat 668..691 CDD:275380 4/26 (15%)
leucine-rich repeat 692..715 CDD:275380 6/22 (27%)
LRR_8 714..774 CDD:290566 15/98 (15%)
leucine-rich repeat 716..739 CDD:275380 7/61 (11%)
leucine-rich repeat 740..761 CDD:275380 4/20 (20%)
leucine-rich repeat 764..789 CDD:275380 8/35 (23%)
leucine-rich repeat 790..810 CDD:275380 4/19 (21%)
leucine-rich repeat 818..850 CDD:275380 5/31 (16%)
leucine-rich repeat 863..883 CDD:275378 6/19 (32%)
LRR_RI <878..1070 CDD:238064 50/237 (21%)
LRR_8 884..944 CDD:290566 22/75 (29%)
LRR_4 884..925 CDD:289563 13/40 (33%)
leucine-rich repeat 884..907 CDD:275380 5/22 (23%)
leucine-rich repeat 908..933 CDD:275380 13/40 (33%)
leucine-rich repeat 934..955 CDD:275380 4/28 (14%)
leucine-rich repeat 958..982 CDD:275380 3/23 (13%)
leucine-rich repeat 983..1055 CDD:275380 17/93 (18%)
leucine-rich repeat 1009..1033 CDD:275380 4/32 (13%)
leucine-rich repeat 1058..1085 CDD:275380 6/26 (23%)
TPKR_C2 1121..1168 CDD:301599 11/50 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468846
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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