DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and tlr5b

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001124067.2 Gene:tlr5b / 403139 ZFINID:ZDB-GENE-040219-15 Length:881 Species:Danio rerio


Alignment Length:1028 Identity:242/1028 - (23%)
Similarity:377/1028 - (36%) Gaps:311/1028 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LDVSFNELRSLPDAWGASRLRRLQTLSLQHNNIS-TLAPNALAGLSSLRVLNISYNHLVSLPSEA 278
            :|:|.|.:..|.:. ..|||:.||.|.::..... .:..|...|||||.:|.:.||..:.|.:.|
Zfish    58 VDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGA 121

  Fly   279 FAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNN 343
            |.|                     |..||.|        .||..::|.:..:|            
Zfish   122 FNG---------------------LANLEVL--------TLTQCNLDGAVLSG------------ 145

  Fly   344 ALTRIGSKTFKELYFLQILDMRNNSIGHIEEGA-FLPLYNLHTLNLAENRLHTL---DNRIFNGL 404
                   ..||.|..|::|.:|:|:|..|:..: ||.:...|.|:|..|::.::   |...|.|.
Zfish   146 -------NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGK 203

  Fly   405 YVLTKLTLNN-NLVSIVE--------SQAFRNCSDLKELDLSSNQLTE----------VPEAVQD 450
            : .|.|.|:: .|..:.|        ...|:|.| :..||||.|...|          ....:|.
Zfish   204 H-FTLLRLSSITLQDMNEYWLGWEKCGNPFKNTS-ITTLDLSGNGFKESMAKRFFDAIAGTKIQS 266

  Fly   451 LSMLKTLDLGEN-QISEFK---NNTFRNLNQLTGLRLID---NRIGNITVGMFQDLPRLSVLNLA 508
            |.:..:.::|.: ..:.||   |.||:.| :.:|::..|   ::|..:...:|.....|..|.||
Zfish   267 LILSNSYNMGSSFGHTNFKDPDNFTFKGL-EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLA 330

  Fly   509 KNRIQSIERGAFDKNTEIEAIRLDKNFLTDING-IFATLASLLWLNLSENHL-VWFDYAFIP-SN 570
            :|.|..|:..||...|.:..:.|.:|||..|:. :|..|..|..|:||.||: ...|.:|:. .|
Zfish   331 QNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 395

  Fly   571 LKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSIELLFINNNIIGQIQANT 635
            |:.|::.||.:|::..:..|.   .:..|....|||:.:.  |:||      |.:|         
Zfish   396 LRKLNLTGNAVESVHTFAALP---NLNKLYLGKNRISSVS--SLPN------IAHN--------- 440

  Fly   636 FVDKTRLARVDLYANVLSKIS--LNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTT 698
                  |:.:||..|.|..:|  ...||..|     .:...:|.||.|.                
Zfish   441 ------LSTLDLEFNKLHALSDLYTILREFP-----QIENIFLQGNTFS---------------- 478

  Fly   699 RQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNC 763
                                                                             
Zfish   479 ----------------------------------------------------------------- 478

  Fly   764 SCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNL 828
            ||::.    ..||                 :||         :|::.|| |..:::.::.....|
Zfish   479 SCYNQ----KQIV-----------------LSD---------KLQLLHL-GLSSMQLIWSEGKCL 512

  Fly   829 MTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVL 893
                 ...|.|..|:.|.|..|.|.:|....|:.|..|..|.|..|.|.::....|..  ||::|
Zfish   513 -----NVFADLHQLQQLSLTANGLQSLPKDIFKDLTSLFFLDLSFNSLKYLPTDVFPK--SLQIL 570

  Fly   894 RLDNNRLSSL-PHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSD-NAMVVRDAHDIYCLDAGI 956
            .||.|.:.|: |:|  ..:|..|:|..|.:.|.| .|::...:::. |...|....|:.|.    
Zfish   571 NLDYNSIYSVDPNL--FSTLSYLSLMNNDFRCDC-DLKDFQTWLNQTNVTFVHPIEDVTCA---- 628

  Fly   957 KRELELIGNLANGPDCSDLLDASASNISSSQD----LAGGYRLPLLAAVLVLIFLVVVLIIVFVF 1017
                        .|:...::....|:|....:    .....||.|.....|||.|.....||::.
Zfish   629 ------------SPEDQYMVPVVKSSIQCENEEEERRTEKLRLVLFIVCTVLIILFTASTIVYIS 681

  Fly  1018 RESVRMWLFAHY---------GVRVCEP---RFEDAGKLYDAIILHSEKDYEFVCRNIAAEL--- 1067
            |..|   :|..|         |.|. ||   ||     |||..:..|.||.::|.|.:...|   
Zfish   682 RRGV---IFKMYKKLIGELVDGKRE-EPDPDRF-----LYDVYLCFSSKDMKWVERALLKRLDSQ 737

  Fly  1068 --EHGRPPFRLCIQQRDLPPQASHLQLVEGA-RASRKIILVLTRNLLATEWNRIEFRNAFHESLR 1129
              ||.  ..|.|.::||..|...||..:..| :.|||.|.|::.:.|...|....|.        
Zfish   738 FSEHN--TLRCCFEERDFIPGEDHLTNMRSAIQNSRKTICVVSEHFLKDGWCLETFT-------- 792

  Fly  1130 GLAQKLVIIEETSVSAEAEDVAELSPYLKSVPSNRLLTCD--RYFWEKLRYAI 1180
             ||||       .:.||.||:..:. .:.::|..|||...  |.|.|...|.:
Zfish   793 -LAQK-------RMQAELEDILVVL-VVGNIPQYRLLKYKQVRSFIENRSYLV 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 108/410 (26%)
leucine-rich repeat 212..236 CDD:275380 7/20 (35%)
leucine-rich repeat 237..260 CDD:275380 6/23 (26%)
leucine-rich repeat 261..284 CDD:275380 8/22 (36%)
leucine-rich repeat 285..308 CDD:275380 2/22 (9%)
leucine-rich repeat 309..334 CDD:275380 5/24 (21%)
leucine-rich repeat 335..358 CDD:275380 3/22 (14%)
leucine-rich repeat 359..382 CDD:275380 8/23 (35%)
leucine-rich repeat 383..406 CDD:275380 7/25 (28%)
leucine-rich repeat 407..430 CDD:275380 7/31 (23%)
leucine-rich repeat 431..451 CDD:275380 7/29 (24%)
leucine-rich repeat 454..477 CDD:275380 7/26 (27%)
leucine-rich repeat 478..499 CDD:275380 4/23 (17%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
leucine-rich repeat 526..548 CDD:275380 7/22 (32%)
leucine-rich repeat 590..617 CDD:275380 7/26 (27%)
leucine-rich repeat 618..641 CDD:275380 2/22 (9%)
leucine-rich repeat 642..689 CDD:275380 13/48 (27%)
LRRCT 679..736 CDD:214507 2/56 (4%)
LRR <775..>920 CDD:443914 37/145 (26%)
leucine-rich repeat 775..796 CDD:275380 2/20 (10%)
leucine-rich repeat 797..817 CDD:275380 4/19 (21%)
leucine-rich repeat 818..841 CDD:275380 3/22 (14%)
leucine-rich repeat 842..865 CDD:275380 8/22 (36%)
leucine-rich repeat 866..889 CDD:275380 6/22 (27%)
leucine-rich repeat 890..911 CDD:275380 8/21 (38%)
TIR 1045..1183 CDD:214587 42/144 (29%)
tlr5bNP_001124067.2 PLN00113 <55..>404 CDD:215061 104/397 (26%)
leucine-rich repeat 55..78 CDD:275380 7/20 (35%)
leucine-rich repeat 79..103 CDD:275380 6/23 (26%)
leucine-rich repeat 104..127 CDD:275380 9/43 (21%)
leucine-rich repeat 128..153 CDD:275380 10/51 (20%)
leucine-rich repeat 154..178 CDD:275380 8/23 (35%)
leucine-rich repeat 179..236 CDD:275380 14/57 (25%)
leucine-rich repeat 300..323 CDD:275380 3/22 (14%)
LRR <304..561 CDD:443914 83/404 (21%)
leucine-rich repeat 324..347 CDD:275380 9/22 (41%)
leucine-rich repeat 348..371 CDD:275380 7/22 (32%)
leucine-rich repeat 372..395 CDD:275380 8/22 (36%)
leucine-rich repeat 396..417 CDD:275380 6/23 (26%)
leucine-rich repeat 441..482 CDD:275380 15/126 (12%)
leucine-rich repeat 494..520 CDD:275380 6/31 (19%)
leucine-rich repeat 521..544 CDD:275380 8/22 (36%)
leucine-rich repeat 545..563 CDD:275380 5/17 (29%)
leucine-rich repeat 567..587 CDD:275380 8/21 (38%)
LRRCT 596..645 CDD:214507 11/65 (17%)
TIR 712..846 CDD:214587 42/144 (29%)
Blue background indicates that the domain is not in the aligned region.

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