DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and CG32055

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster


Alignment Length:571 Identity:145/571 - (25%)
Similarity:242/571 - (42%) Gaps:76/571 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DLQCSQELLHASELAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGK 132
            |||..::|.:.|.|.    |:::...:|            |.:.|             ..|...|
  Fly    19 DLQECEDLGNGSYLC----REIESFEQL------------NRYVG-------------KNWKSVK 54

  Fly   133 TLELH--------GQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQ---NRIRSAEF 186
            .:..|        |: ..||..|.:|.|.::....|.|.......:||.||||.   :.::|.:|
  Fly    55 VVNEHTGIERAEDGE-LPGLSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSEQF 118

  Fly   187 LGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLA 251
                                ...||:...|||:|::.::.... .|....|...:...|.|:.:.
  Fly   119 --------------------PNPSEMINFDVSYNDILAITTKL-MSGFGNLVYANFSENLIAVIE 162

  Fly   252 PNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSG 316
            |||...:.:||.|:::.|:..::   ....|..||.|.:..|:|.:.....|..|.:|..|.|..
  Fly   163 PNAFRHMKNLRFLDLTTNYQENI---TLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHS 224

  Fly   317 NQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFK---ELYFLQILDMRNNSIGHIEEGAFL 378
            |.|  .|:|...|..|..|.|||:|||.|..|....|.   |:..|::||..:|.:..:::..|.
  Fly   225 NWL--EHLDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFC 287

  Fly   379 PLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTE 443
            .|..|.||||..|:::.:..|.|.||..|..|.|..|.:||:....|.|.:.|::||||.|.:.:
  Fly   288 RLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQK 352

  Fly   444 VPEAV---QDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVL 505
            :...|   :.|..|..|||..|.|::.......::..:..|||..||:.::.:.||..|.:|.:|
  Fly   353 LGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLL 417

  Fly   506 NLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSN 570
            .:.:||::.|:....|....:..:.|:.|.||.:..:.::...|...|::.....| ....:...
  Fly   418 TINENRLEEIDGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLLQLRNITLEGNPW-QCLCLDEI 481

  Fly   571 LKWLD-IHGNYIEALGNYYKLQEEIRVTT-LDASHNRITEIGAMSVPNSIE 619
            ..||: .|.:|......|:..::.:.|.| :|.....:.|..|..:..|.|
  Fly   482 TSWLNGRHVSYARPSSAYFSGRKPLCVVTPMDKCLRDLQETKAQGIVESYE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 7/22 (32%)
leucine-rich repeat 92..115 CDD:275380 3/22 (14%)
LRR_8 115..181 CDD:404697 17/76 (22%)
leucine-rich repeat 116..146 CDD:275380 6/37 (16%)
leucine-rich repeat 147..170 CDD:275380 5/22 (23%)
leucine-rich repeat 171..201 CDD:275380 8/32 (25%)
LRR 210..592 CDD:443914 109/388 (28%)
leucine-rich repeat 212..236 CDD:275380 5/23 (22%)
leucine-rich repeat 237..260 CDD:275380 6/22 (27%)
leucine-rich repeat 261..284 CDD:275380 5/22 (23%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 9/24 (38%)
leucine-rich repeat 335..358 CDD:275380 11/25 (44%)
leucine-rich repeat 359..382 CDD:275380 6/22 (27%)
leucine-rich repeat 383..406 CDD:275380 10/22 (45%)
leucine-rich repeat 407..430 CDD:275380 8/22 (36%)
leucine-rich repeat 431..451 CDD:275380 7/22 (32%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 6/22 (27%)
leucine-rich repeat 526..548 CDD:275380 4/21 (19%)
leucine-rich repeat 590..617 CDD:275380 5/27 (19%)
leucine-rich repeat 618..641 CDD:275380 1/2 (50%)
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380 5/22 (23%)
leucine-rich repeat 100..123 CDD:275380 8/42 (19%)
LRR_8 126..180 CDD:404697 14/54 (26%)
leucine-rich repeat 128..147 CDD:275380 5/19 (26%)
leucine-rich repeat 148..171 CDD:275380 6/22 (27%)
LRR 171..>486 CDD:443914 92/320 (29%)
leucine-rich repeat 172..192 CDD:275380 5/22 (23%)
leucine-rich repeat 193..216 CDD:275380 7/22 (32%)
leucine-rich repeat 217..240 CDD:275380 9/24 (38%)
leucine-rich repeat 241..267 CDD:275380 11/25 (44%)
leucine-rich repeat 268..291 CDD:275380 6/22 (27%)
leucine-rich repeat 292..315 CDD:275380 10/22 (45%)
leucine-rich repeat 316..339 CDD:275380 8/22 (36%)
leucine-rich repeat 340..365 CDD:275380 8/24 (33%)
leucine-rich repeat 366..389 CDD:275380 6/22 (27%)
leucine-rich repeat 390..413 CDD:275380 8/22 (36%)
leucine-rich repeat 414..437 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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