Sequence 1: | NP_476814.1 | Gene: | 18w / 37277 | FlyBaseID: | FBgn0004364 | Length: | 1385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_942086.2 | Gene: | Tlr3 / 364594 | RGDID: | 735171 | Length: | 905 | Species: | Rattus norvegicus |
Alignment Length: | 1031 | Identity: | 230/1031 - (22%) |
---|---|---|---|
Similarity: | 372/1031 - (36%) | Gaps: | 296/1031 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 210 SELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSL 274
Fly 275 PSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLN 339
Fly 340 LSNNALTRIGSKTFKELYF-----LQILDMRNNSIGHIEEGAF--------LPLYNLH-TLNLAE 390
Fly 391 NRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNC--SDLKELDLSSNQLTEV-PEAVQDLS 452
Fly 453 MLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI-----------GNITVGMFQDLPRLSVLN 506
Fly 507 LAKNRIQSIERGAFDKNTEIEAIRLDKNF-----LTDINGIFATLASLLWLNLSENHL------- 559
Fly 560 -VWFDYAFIPSNLKWLDIHGNYIE---------ALGNYYKLQEEIRVTTLDASHNRITEIGAMSV 614
Fly 615 PNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGN 679
Fly 680 PFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPT 744
Fly 745 CHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEV 809
Fly 810 GHLTGRRNLRALYLNASNLMTLQNGS--------LAQLVNLRVLHLENNKLTALEGTEFRSLGLL 866
Fly 867 RELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYR---HSLQGLTLGRNAWSCRCQQ 928
Fly 929 LRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLANGPDCSDLLDASASNISSSQDLAGGY 993
Fly 994 RLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFAHY---------GVRVCE---PRFEDAGKLYD 1046
Fly 1047 AIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRDLPPQASHLQ-LVEGARASRKIILVLTRNL 1110
Fly 1111 LATE-WNRIEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPYLKSVPSNRL 1165 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
18w | NP_476814.1 | leucine-rich repeat | 66..91 | CDD:275380 | |
leucine-rich repeat | 92..115 | CDD:275380 | |||
LRR_8 | 115..181 | CDD:290566 | |||
leucine-rich repeat | 116..146 | CDD:275380 | |||
leucine-rich repeat | 147..170 | CDD:275380 | |||
leucine-rich repeat | 171..201 | CDD:275380 | |||
LRR_RI | 210..464 | CDD:238064 | 85/270 (31%) | ||
leucine-rich repeat | 212..236 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 235..295 | CDD:290566 | 22/59 (37%) | ||
leucine-rich repeat | 237..260 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 261..284 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 283..345 | CDD:290566 | 20/61 (33%) | ||
leucine-rich repeat | 285..308 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 309..334 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 334..393 | CDD:290566 | 22/72 (31%) | ||
leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 359..382 | CDD:275380 | 9/30 (30%) | ||
LRR_8 | 382..441 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 383..406 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 407..430 | CDD:275380 | 5/24 (21%) | ||
LRR_8 | 431..488 | CDD:290566 | 22/57 (39%) | ||
leucine-rich repeat | 431..451 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 454..477 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 477..559 | CDD:290566 | 28/97 (29%) | ||
leucine-rich repeat | 478..499 | CDD:275380 | 8/31 (26%) | ||
leucine-rich repeat | 502..525 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 526..548 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 590..617 | CDD:275380 | 0/26 (0%) | ||
leucine-rich repeat | 618..641 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 642..689 | CDD:275380 | 5/46 (11%) | ||
LRRCT | 679..736 | CDD:214507 | 6/56 (11%) | ||
leucine-rich repeat | 775..796 | CDD:275380 | 0/20 (0%) | ||
LRR_8 | 797..852 | CDD:290566 | 19/62 (31%) | ||
leucine-rich repeat | 797..817 | CDD:275380 | 6/19 (32%) | ||
leucine-rich repeat | 818..841 | CDD:275380 | 7/30 (23%) | ||
LRR_8 | 841..900 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 842..865 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 866..907 | CDD:289563 | 11/40 (28%) | ||
leucine-rich repeat | 866..889 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 890..911 | CDD:275380 | 5/23 (22%) | ||
TIR | 1045..1183 | CDD:214587 | 28/123 (23%) |