DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and Tlr10

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001139507.2 Gene:Tlr10 / 305355 RGDID:1311569 Length:811 Species:Rattus norvegicus


Alignment Length:902 Identity:190/902 - (21%)
Similarity:323/902 - (35%) Gaps:238/902 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 RIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKEL--DLSSNQLTEVPEAVQDLSMLKTLDLGE 461
            |:.:.:|.|      .|::...|:.|.|. :|.:||  :.|:..|.:||..|...:.:  |||..
  Rat     2 RLISSIYTL------YNIIMSTEAWAPRP-TDERELISNYSNMALRKVPPDVTPATTI--LDLSY 57

  Fly   462 NQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEI 526
            |.:.:|:::...:.::|..|.|..|.|..:...:|.....||.|:|:.||:|||           
  Rat    58 NLLYQFQSSDCHSFSKLRFLILCHNSIQQLDTKIFDLNKELSYLDLSYNRLQSI----------- 111

  Fly   527 EAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGN--YIEALG-NYY 588
                           .:::|..|..|:||.|     |:..:|:    .:..||  ::|.|| :..
  Rat   112 ---------------TWSSLVDLRHLDLSFN-----DFDTLPA----CEEIGNMRHLETLGLSGA 152

  Fly   589 KLQE-------EIRVTTLDASHNRIT--EIGAMSVPNSIELLFINNNIIGQIQANTFV---DKTR 641
            |:|.       .::.:|:....|.::  |.|::.|.|:..|     :|:..:.||.:|   |..:
  Rat   153 KIQRSDLQKIANLQFSTVFIGLNTLSHYEEGSLPVLNTTVL-----HIVLPMAANFWVLLCDGMK 212

  Fly   642 LARVDLYANVLSK---ISLNALRVAPVSAEK-------------------------------PVP 672
            .::|...:|:..|   :|....|...|...|                               .:.
  Rat   213 TSKVVEMSNIGGKSQFVSYETPRTLSVENTKASTLIFHKVDLLWDDLLHVFQFVWRTSVECFQIQ 277

  Fly   673 EFYLGGNPFECDCSMEWLQRINNLTTRQHPHV----------------VDLGNI---ECLMPHSR 718
            :...||.......|.::...:......:..|.                :||.|:   :..|||  
  Rat   278 DLTFGGMASRDHSSFDYSNTVMKAVILESIHFRIFFIPQNKIYLFFTQMDLENLTISDAQMPH-- 340

  Fly   719 SAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDL 783
                                                  ::.|.:...|....:|.||:   ..||
  Rat   341 --------------------------------------LLFPSHPQSFQHLNFANNIL---TDDL 364

  Fly   784 AALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNAS-NLMTLQNGSLAQ------LVN 841
            ...|.::|. :..|.|.||.:..|.:..|.. .:...|:|:.| ||:...||....      |:|
  Rat   365 FKNPIQMPY-LKTLVLRGNQLETLSLVSLFA-NHTSLLHLDLSQNLLQHGNGEKCMWPDTLILLN 427

  Fly   842 L-----------------RVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNAT-FEPLV 888
            |                 :.|.|.|||:.|:. .|...|..||||.:..|.||.:.... |:.|.
  Rat   428 LSSNKFDGSVFRCLPKSIQTLDLNNNKIRAVP-KEIIYLKSLRELSIAFNFLTDLPGCDHFKQLS 491

  Fly   889 SLEVLRLDNNRLSSLPHLQYRHSLQ---GLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIY 950
            ||.:   :.|.:.| |.|.:..|.|   .|..|||.:.|.| :.|:.......:..::....|.|
  Rat   492 SLNI---EMNLILS-PSLDFFQSCQEVKTLNAGRNPFRCIC-EFRDFIWLEKHSKGLMSGWPDSY 551

  Fly   951 CLDAGIKRELELIGNLANGPDCSDL-LDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIV 1014
            ..:..:.         ..|....|: |...|.|.:            ||...:||:.||:.|::.
  Rat   552 ACEYPLS---------LKGTPLKDVYLPELACNTT------------LLIVTIVLVILVLGLVVA 595

  Fly  1015 FVFRESVRMW--------LFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGR 1071
            |...:...:|        :...:.:|............:.|.|.::..|..:|...:...||...
  Rat   596 FCILKFDMLWYLRVLAQCIRTQHRIRKTVREERKRSIQFHAFISYAAHDSVWVKNELIPNLETED 660

  Fly  1072 PPFRLCIQQRDLPPQASHLQ-LVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKL 1135
            ....||:.:|:..|..|..: ::.....|.|.|.||:.|.:...|...|...|.|...|.....:
  Rat   661 GSVLLCLPERNFDPDRSIAENIISCTEKSYKSIFVLSPNFVQNGWCHNELYLAHHNPFRDNYDYI 725

  Fly  1136 VIIEETSVSAEAEDVAELSPYLKSVPSNRLL---TCDR----YFWEKLRYAIPIELS 1185
            :.|....:.:..  |....|.||::...::.   ..||    .||..||.||.:.||
  Rat   726 IPILLEPIPSYC--VPTKFPKLKALLEKKVYLEWPKDRRKHGLFWANLRAAINVNLS 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 49/197 (25%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380
leucine-rich repeat 359..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380 1/6 (17%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 7/21 (33%)
leucine-rich repeat 454..477 CDD:275380 5/22 (23%)
leucine-rich repeat 478..499 CDD:275380 6/20 (30%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
leucine-rich repeat 526..548 CDD:275380 1/21 (5%)
leucine-rich repeat 590..617 CDD:275380 6/35 (17%)
leucine-rich repeat 618..641 CDD:275380 6/25 (24%)
leucine-rich repeat 642..689 CDD:275380 10/80 (13%)
LRRCT 679..736 CDD:214507 8/75 (11%)
LRR <775..>920 CDD:443914 48/172 (28%)
leucine-rich repeat 775..796 CDD:275380 5/20 (25%)
leucine-rich repeat 797..817 CDD:275380 6/19 (32%)
leucine-rich repeat 818..841 CDD:275380 8/29 (28%)
leucine-rich repeat 842..865 CDD:275380 9/39 (23%)
leucine-rich repeat 866..889 CDD:275380 9/23 (39%)
leucine-rich repeat 890..911 CDD:275380 5/20 (25%)
TIR 1045..1183 CDD:214587 35/145 (24%)
Tlr10NP_001139507.2 None
Blue background indicates that the domain is not in the aligned region.

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