Sequence 1: | NP_476814.1 | Gene: | 18w / 37277 | FlyBaseID: | FBgn0004364 | Length: | 1385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062051.2 | Gene: | Tlr4 / 29260 | RGDID: | 3870 | Length: | 835 | Species: | Rattus norvegicus |
Alignment Length: | 1084 | Identity: | 236/1084 - (21%) |
---|---|---|---|
Similarity: | 397/1084 - (36%) | Gaps: | 368/1084 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 DNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVS 218
Fly 219 FNELRSLPD-AWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGN 282
Fly 283 KELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNS-----TFAGLIRLIVLNLSN 342
Fly 343 NALTRIGSKTFKELYFLQ-------ILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRI 400
Fly 401 FNGLYVLTKLTLNN----NLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGE 461
Fly 462 NQISEFK-------NNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPR------LSVLNLAKNRIQ 513
Fly 514 SIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVW---FDYA-FIPSNLKWL 574
Fly 575 DIHGNYIEAL-GNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSIE-LLFINNNIIGQIQANTFV 637
Fly 638 DKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHP 702
Fly 703 HVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFH 767
Fly 768 DATWATNIVDCGRQDLAALPNRIPQDVSD-LYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTL 831
Fly 832 QNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLD 896
Fly 897 NNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELE 961
Fly 962 LIGNLANGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLF 1026
Fly 1027 AHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRDLPP----QA 1087
Fly 1088 SHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNA----FHESLRGLAQKLVIIEETSVSAEAE 1148
Fly 1149 DVAELSPYLKSVPSNRLLTCDRY------------FWEKLRYAI 1180 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
18w | NP_476814.1 | leucine-rich repeat | 66..91 | CDD:275380 | |
leucine-rich repeat | 92..115 | CDD:275380 | |||
LRR_8 | 115..181 | CDD:290566 | 6/26 (23%) | ||
leucine-rich repeat | 116..146 | CDD:275380 | |||
leucine-rich repeat | 147..170 | CDD:275380 | 4/15 (27%) | ||
leucine-rich repeat | 171..201 | CDD:275380 | 6/29 (21%) | ||
LRR_RI | 210..464 | CDD:238064 | 71/270 (26%) | ||
leucine-rich repeat | 212..236 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 235..295 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 237..260 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 261..284 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 283..345 | CDD:290566 | 16/66 (24%) | ||
leucine-rich repeat | 285..308 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 309..334 | CDD:275380 | 6/29 (21%) | ||
LRR_8 | 334..393 | CDD:290566 | 21/65 (32%) | ||
leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 359..382 | CDD:275380 | 8/29 (28%) | ||
LRR_8 | 382..441 | CDD:290566 | 17/62 (27%) | ||
leucine-rich repeat | 383..406 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 407..430 | CDD:275380 | 6/26 (23%) | ||
LRR_8 | 431..488 | CDD:290566 | 13/63 (21%) | ||
leucine-rich repeat | 431..451 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 454..477 | CDD:275380 | 5/29 (17%) | ||
LRR_8 | 477..559 | CDD:290566 | 20/87 (23%) | ||
leucine-rich repeat | 478..499 | CDD:275380 | 1/20 (5%) | ||
leucine-rich repeat | 502..525 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 526..548 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 590..617 | CDD:275380 | 7/26 (27%) | ||
leucine-rich repeat | 618..641 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 642..689 | CDD:275380 | 11/46 (24%) | ||
LRRCT | 679..736 | CDD:214507 | 7/56 (13%) | ||
leucine-rich repeat | 775..796 | CDD:275380 | 2/20 (10%) | ||
LRR_8 | 797..852 | CDD:290566 | 13/54 (24%) | ||
leucine-rich repeat | 797..817 | CDD:275380 | 2/19 (11%) | ||
leucine-rich repeat | 818..841 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 841..900 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 842..865 | CDD:275380 | 5/22 (23%) | ||
LRR_4 | 866..907 | CDD:289563 | 8/40 (20%) | ||
leucine-rich repeat | 866..889 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 890..911 | CDD:275380 | 5/20 (25%) | ||
TIR | 1045..1183 | CDD:214587 | 43/156 (28%) | ||
Tlr4 | NP_062051.2 | PLN00113 | 23..>456 | CDD:215061 | 127/515 (25%) |
LRR 1 | 54..75 | 6/20 (30%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 6/39 (15%) | ||
LRR 2 | 78..99 | 9/20 (45%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 10/24 (42%) | ||
LRR 3 | 102..123 | 7/20 (35%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 126..147 | 6/41 (15%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 8/43 (19%) | ||
LRR 5 | 150..171 | 5/29 (17%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 7/32 (22%) | ||
LRR 6 | 175..198 | 8/25 (32%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 9/30 (30%) | ||
LRR 7 | 204..224 | 7/19 (37%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 7/21 (33%) | ||
LRR 8 | 226..247 | 10/30 (33%) | |||
leucine-rich repeat | 256..310 | CDD:275380 | 15/71 (21%) | ||
LRR 9 | 372..381 | 5/8 (63%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 7/24 (29%) | ||
LRR 10 | 398..420 | 7/21 (33%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 7/21 (33%) | ||
LRR 11 | 421..442 | 6/23 (26%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 6/23 (26%) | ||
LRR 12 | 446..467 | 5/33 (15%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 6/35 (17%) | ||
LRR 13 | 470..491 | 8/34 (24%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 7/37 (19%) | ||
LRR_8 | 494..554 | CDD:404697 | 24/158 (15%) | ||
LRR 14 | 495..516 | 10/101 (10%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 12/121 (10%) | ||
LRR 15 | 519..540 | 5/20 (25%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 7/22 (32%) | ||
LRR 16 | 543..564 | 6/37 (16%) | |||
leucine-rich repeat | 544..567 | CDD:275380 | 7/46 (15%) | ||
TIR | 672..813 | CDD:214587 | 42/154 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |