Sequence 1: | NP_476814.1 | Gene: | 18w / 37277 | FlyBaseID: | FBgn0004364 | Length: | 1385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_067272.1 | Gene: | Tlr4 / 21898 | MGIID: | 96824 | Length: | 835 | Species: | Mus musculus |
Alignment Length: | 1107 | Identity: | 232/1107 - (20%) |
---|---|---|---|
Similarity: | 376/1107 - (33%) | Gaps: | 414/1107 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 DNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVS 218
Fly 219 FNELRSLPD-AWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGN 282
Fly 283 KELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNST-----FAGLIRLIVLNLSN 342
Fly 343 NALTRIGSKTFKELYFLQ-------ILDMRNNSIGHIEEGAFLPLYNLHTL-------------- 386
Fly 387 ---NLAENRLHTL------DNR--------IFNGLYVLT----KLTLNNNLV-SIVESQAFRNCS 429
Fly 430 DLKELDLSSNQLTEVPEAV--QDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNIT 492
Fly 493 VGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSEN 557
Fly 558 HLVW---FDYAFIPSN-LKWLDIHGN-YIEALGNYYKLQEEIRVTTLDASHN---RITEIGAMSV 614
Fly 615 PNSIE-LLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGG 678
Fly 679 NPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPP 743
Fly 744 TCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELE 808
Fly 809 VGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHN 873
Fly 874 NMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSD 938
Fly 939 NAMVVRDAHDIYCLDAGIKRELELIGNLANGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLV 1003
Fly 1004 LIFLVVVLIIVFVFRESVRMWLFAHYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELE 1068
Fly 1069 HGRPPFRLCIQQRDLPP----QASHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNA----FH 1125
Fly 1126 ESLRGLAQKLVIIEETSVSAEAEDVAELSPYLKSVPSNRLLTCDRY------------FWEKLRY 1178
Fly 1179 AI 1180 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
18w | NP_476814.1 | leucine-rich repeat | 66..91 | CDD:275380 | |
leucine-rich repeat | 92..115 | CDD:275380 | |||
LRR_8 | 115..181 | CDD:290566 | 4/26 (15%) | ||
leucine-rich repeat | 116..146 | CDD:275380 | |||
leucine-rich repeat | 147..170 | CDD:275380 | 3/15 (20%) | ||
leucine-rich repeat | 171..201 | CDD:275380 | 4/29 (14%) | ||
LRR_RI | 210..464 | CDD:238064 | 82/304 (27%) | ||
leucine-rich repeat | 212..236 | CDD:275380 | 10/24 (42%) | ||
LRR_8 | 235..295 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 237..260 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 261..284 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 283..345 | CDD:290566 | 14/66 (21%) | ||
leucine-rich repeat | 285..308 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 309..334 | CDD:275380 | 6/29 (21%) | ||
LRR_8 | 334..393 | CDD:290566 | 23/82 (28%) | ||
leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 359..382 | CDD:275380 | 9/29 (31%) | ||
LRR_8 | 382..441 | CDD:290566 | 22/94 (23%) | ||
leucine-rich repeat | 383..406 | CDD:275380 | 13/53 (25%) | ||
leucine-rich repeat | 407..430 | CDD:275380 | 7/27 (26%) | ||
LRR_8 | 431..488 | CDD:290566 | 9/58 (16%) | ||
leucine-rich repeat | 431..451 | CDD:275380 | 5/21 (24%) | ||
leucine-rich repeat | 454..477 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 477..559 | CDD:290566 | 18/81 (22%) | ||
leucine-rich repeat | 478..499 | CDD:275380 | 0/20 (0%) | ||
leucine-rich repeat | 502..525 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 526..548 | CDD:275380 | 1/21 (5%) | ||
leucine-rich repeat | 590..617 | CDD:275380 | 9/29 (31%) | ||
leucine-rich repeat | 618..641 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 642..689 | CDD:275380 | 10/46 (22%) | ||
LRRCT | 679..736 | CDD:214507 | 7/56 (13%) | ||
leucine-rich repeat | 775..796 | CDD:275380 | 0/20 (0%) | ||
LRR_8 | 797..852 | CDD:290566 | 10/54 (19%) | ||
leucine-rich repeat | 797..817 | CDD:275380 | 0/19 (0%) | ||
leucine-rich repeat | 818..841 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 841..900 | CDD:290566 | 11/58 (19%) | ||
leucine-rich repeat | 842..865 | CDD:275380 | 4/22 (18%) | ||
LRR_4 | 866..907 | CDD:289563 | 7/40 (18%) | ||
leucine-rich repeat | 866..889 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 890..911 | CDD:275380 | 4/20 (20%) | ||
TIR | 1045..1183 | CDD:214587 | 43/156 (28%) | ||
Tlr4 | NP_067272.1 | LRR_8 | 53..113 | CDD:290566 | 21/81 (26%) |
LRR 1 | 54..75 | 4/20 (20%) | |||
leucine-rich repeat | 58..78 | CDD:275380 | 4/39 (10%) | ||
LRR 2 | 78..99 | 10/20 (50%) | |||
leucine-rich repeat | 79..102 | CDD:275380 | 10/24 (42%) | ||
LRR 3 | 102..123 | 6/20 (30%) | |||
leucine-rich repeat | 103..126 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 126..147 | 8/41 (20%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 9/43 (21%) | ||
LRR_8 | 150..214 | CDD:290566 | 20/75 (27%) | ||
LRR 5 | 150..171 | 5/29 (17%) | |||
leucine-rich repeat | 151..175 | CDD:275380 | 7/32 (22%) | ||
LRR 6 | 175..198 | 8/25 (32%) | |||
leucine-rich repeat | 176..204 | CDD:275380 | 9/30 (30%) | ||
LRR 7 | 204..224 | 8/19 (42%) | |||
leucine-rich repeat | 205..226 | CDD:275380 | 8/21 (38%) | ||
LRR 8 | 226..247 | 3/20 (15%) | |||
LRR 9 | 248..269 | 7/20 (35%) | |||
LRR 10 | 329..349 | 6/52 (12%) | |||
leucine-rich repeat | 331..350 | CDD:275380 | 7/51 (14%) | ||
LRR 11 | 350..370 | 8/44 (18%) | |||
leucine-rich repeat | 351..372 | CDD:275380 | 9/45 (20%) | ||
LRR_RI | <369..555 | CDD:238064 | 61/316 (19%) | ||
LRR 12 | 372..392 | 7/19 (37%) | |||
leucine-rich repeat | 373..398 | CDD:275380 | 7/24 (29%) | ||
LRR 13 | 398..420 | 6/21 (29%) | |||
leucine-rich repeat | 399..421 | CDD:275380 | 7/21 (33%) | ||
LRR 14 | 421..442 | 8/23 (35%) | |||
leucine-rich repeat | 422..446 | CDD:275380 | 8/26 (31%) | ||
LRR 15 | 446..467 | 5/33 (15%) | |||
leucine-rich repeat | 447..470 | CDD:275380 | 6/35 (17%) | ||
LRR 16 | 470..490 | 8/33 (24%) | |||
leucine-rich repeat | 471..495 | CDD:275380 | 7/37 (19%) | ||
LRR_8 | 494..554 | CDD:290566 | 20/157 (13%) | ||
LRR 17 | 495..516 | 9/69 (13%) | |||
leucine-rich repeat | 496..519 | CDD:275380 | 9/120 (8%) | ||
LRR 18 | 519..540 | 5/20 (25%) | |||
leucine-rich repeat | 520..543 | CDD:275380 | 7/22 (32%) | ||
LRR 19 | 543..564 | 5/37 (14%) | |||
Interaction with SCIMP. /evidence=ECO:0000269|PubMed:28098138 | 670..835 | 43/158 (27%) | |||
TIR | 672..813 | CDD:214587 | 42/154 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |