Sequence 1: | NP_476814.1 | Gene: | 18w / 37277 | FlyBaseID: | FBgn0004364 | Length: | 1385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001344245.1 | Gene: | Tlr3 / 142980 | MGIID: | 2156367 | Length: | 905 | Species: | Mus musculus |
Alignment Length: | 1113 | Identity: | 239/1113 - (21%) |
---|---|---|---|
Similarity: | 397/1113 - (35%) | Gaps: | 318/1113 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 AFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPS-LQ 172
Fly 173 LLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSL-PDAWGASRLRR 236
Fly 237 LQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKG 301
Fly 302 LLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRN 366
Fly 367 NSIG-HIEEGAFLPLYN--LHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNC 428
Fly 429 SDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI---- 488
Fly 489 -------GNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFL---TDINGIF 543
Fly 544 ATLA--SLLWLNLSENHL--------VWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQ-EEIRVT 597
Fly 598 TLDASHNRITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRV 662
Fly 663 APVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLAS 727
Fly 728 LSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQ 792
Fly 793 DVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGS--------LAQLVNLRVLHLEN 849
Fly 850 NKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSL------PHLQY 908
Fly 909 RHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLANGPDCS 973
Fly 974 DLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFAHY--------- 1029
Fly 1030 GVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRDLPPQASHLQ-LV 1093
Fly 1094 EGARASRKIILVLTRNLLATE-WNRIEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPYL 1157
Fly 1158 KSVPSNRL 1165 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
18w | NP_476814.1 | leucine-rich repeat | 66..91 | CDD:275380 | |
leucine-rich repeat | 92..115 | CDD:275380 | 3/5 (60%) | ||
LRR_8 | 115..181 | CDD:290566 | 16/66 (24%) | ||
leucine-rich repeat | 116..146 | CDD:275380 | 6/29 (21%) | ||
leucine-rich repeat | 147..170 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 171..201 | CDD:275380 | 7/29 (24%) | ||
LRR_RI | 210..464 | CDD:238064 | 71/258 (28%) | ||
leucine-rich repeat | 212..236 | CDD:275380 | 8/24 (33%) | ||
LRR_8 | 235..295 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 237..260 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 261..284 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 283..345 | CDD:290566 | 20/61 (33%) | ||
leucine-rich repeat | 285..308 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 309..334 | CDD:275380 | 6/24 (25%) | ||
LRR_8 | 334..393 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 335..358 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 359..382 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 382..441 | CDD:290566 | 15/60 (25%) | ||
leucine-rich repeat | 383..406 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 407..430 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 431..488 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 431..451 | CDD:275380 | 8/20 (40%) | ||
leucine-rich repeat | 454..477 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 477..559 | CDD:290566 | 30/97 (31%) | ||
leucine-rich repeat | 478..499 | CDD:275380 | 8/31 (26%) | ||
leucine-rich repeat | 502..525 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 526..548 | CDD:275380 | 8/26 (31%) | ||
leucine-rich repeat | 590..617 | CDD:275380 | 3/27 (11%) | ||
leucine-rich repeat | 618..641 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 642..689 | CDD:275380 | 5/46 (11%) | ||
LRRCT | 679..736 | CDD:214507 | 6/56 (11%) | ||
leucine-rich repeat | 775..796 | CDD:275380 | 0/20 (0%) | ||
LRR_8 | 797..852 | CDD:290566 | 18/62 (29%) | ||
leucine-rich repeat | 797..817 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 818..841 | CDD:275380 | 7/30 (23%) | ||
LRR_8 | 841..900 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 842..865 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 866..907 | CDD:289563 | 12/46 (26%) | ||
leucine-rich repeat | 866..889 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 890..911 | CDD:275380 | 7/26 (27%) | ||
TIR | 1045..1183 | CDD:214587 | 28/123 (23%) | ||
Tlr3 | NP_001344245.1 | leucine-rich repeat | 37..53 | CDD:275380 | 4/30 (13%) |
LRR 1 | 53..74 | 7/20 (35%) | |||
leucine-rich repeat | 54..77 | CDD:275380 | 7/39 (18%) | ||
PLN00113 | 70..>543 | CDD:215061 | 141/670 (21%) | ||
LRR 2 | 77..98 | 7/22 (32%) | |||
leucine-rich repeat | 78..101 | CDD:275380 | 8/24 (33%) | ||
LRR 3 | 101..122 | 7/20 (35%) | |||
leucine-rich repeat | 102..125 | CDD:275380 | 7/22 (32%) | ||
LRR 4 | 125..146 | 5/20 (25%) | |||
leucine-rich repeat | 126..149 | CDD:275380 | 5/22 (23%) | ||
LRR 5 | 149..170 | 6/20 (30%) | |||
leucine-rich repeat | 150..199 | CDD:275380 | 14/48 (29%) | ||
LRR 6 | 173..196 | 5/22 (23%) | |||
LRR 7 | 199..220 | 7/20 (35%) | |||
leucine-rich repeat | 200..250 | CDD:275380 | 14/49 (29%) | ||
LRR 8 | 250..271 | 6/20 (30%) | |||
leucine-rich repeat | 251..276 | CDD:275380 | 8/46 (17%) | ||
LRR 9 | 276..297 | 8/20 (40%) | |||
leucine-rich repeat | 277..300 | CDD:275380 | 9/22 (41%) | ||
LRR 10 | 300..321 | 6/20 (30%) | |||
leucine-rich repeat | 301..324 | CDD:275380 | 7/22 (32%) | ||
LRR 11 | 324..345 | 4/22 (18%) | |||
leucine-rich repeat | 325..381 | CDD:275380 | 16/57 (28%) | ||
LRR 12 | 357..378 | 7/20 (35%) | |||
LRR 13 | 381..401 | 5/19 (26%) | |||
leucine-rich repeat | 382..433 | CDD:275380 | 16/56 (29%) | ||
LRR 14 | 409..430 | 7/20 (35%) | |||
LRR 15 | 433..454 | 9/25 (36%) | |||
leucine-rich repeat | 434..458 | CDD:275380 | 10/45 (22%) | ||
LRR 16 | 458..479 | 5/21 (24%) | |||
leucine-rich repeat | 459..482 | CDD:275380 | 4/23 (17%) | ||
LRR 17 | 482..502 | 5/79 (6%) | |||
leucine-rich repeat | 483..508 | CDD:275380 | 9/84 (11%) | ||
PPP1R42 | 503..>649 | CDD:411060 | 42/214 (20%) | ||
LRR 18 | 508..529 | 6/86 (7%) | |||
leucine-rich repeat | 509..532 | CDD:275380 | 7/88 (8%) | ||
LRR 19 | 532..553 | 6/20 (30%) | |||
leucine-rich repeat | 533..564 | CDD:275380 | 7/30 (23%) | ||
LRR 20 | 564..585 | 7/20 (35%) | |||
leucine-rich repeat | 565..586 | CDD:275380 | 7/20 (35%) | ||
LRR 21 | 588..609 | 5/20 (25%) | |||
leucine-rich repeat | 589..610 | CDD:275378 | 5/20 (25%) | ||
LRR 22 | 612..633 | 6/20 (30%) | |||
leucine-rich repeat | 613..637 | CDD:275380 | 7/26 (27%) | ||
LRRCT | 646..698 | CDD:214507 | 9/66 (14%) | ||
Tlr3_TMD | 699..731 | CDD:407816 | 10/37 (27%) | ||
TIR | 756..901 | CDD:214587 | 28/126 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4641 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D147327at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.780 |