DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC1270698

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_061512685.1 Gene:LOC1270698 / 1270698 VectorBaseID:AGAMI1_014276 Length:728 Species:Anopheles gambiae


Alignment Length:596 Identity:143/596 - (23%)
Similarity:218/596 - (36%) Gaps:183/596 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 LLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRL 237
            ||:||.....|:    |...||...:..|...:....| |:.:.:..|     ||         :
Mosquito    27 LLSLTLLPTASS----FCPSLCTCESDRNLRTSCINAS-LEVVPIQLN-----PD---------V 72

  Fly   238 QTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGL 302
            :.|:|..|.| |.....||....|..|::|:|.|.:|.|:.|...                    
Mosquito    73 RYLNLTANQI-TNVHFTLAFYYQLESLDLSHNRLDTLGSKNFESQ-------------------- 116

  Fly   303 LHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNN 367
                |:||.|:|:.|.|.:...|  :|.||.||.:|.|.:|.|.::....|:.|..|:.|::.||
Mosquito   117 ----EKLLALNLTHNVLPALLKD--SFRGLRRLELLRLGDNQLEQVHPTAFQSLVSLRRLELPNN 175

  Fly   368 SIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNG----LYVLTKLTLNNNLVSIVESQAFRNC 428
            .:...|||...||.:|.||.||.|:|..:.   :.|    |..|..|.|:.||:..|.:.:|...
Mosquito   176 RLVSFEEGVLRPLVSLDTLLLANNQLLEVP---YGGNLEYLRSLRHLDLSGNLIEFVANDSFGTL 237

  Fly   429 SDLKELDLSSNQLTEVP-EAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNIT 492
            ..|..|.|:.|.|.|:. .....||.|:.|||.:|.::.........|..||.|.|..|....:.
Mosquito   238 HQLHTLRLAGNVLMELDWSGFSGLSALQLLDLADNNLTTIPTVQLAKLYNLTTLTLSGNSFVELP 302

  Fly   493 VGMFQDLPRLSVLNLAK-NRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSE 556
            ...||:|.:|..|:|.: :|::.|:..||..||.::.:.||.      |..|:||...|:     
Mosquito   303 PVAFQNLFQLRELHLDRLDRLEHIDTRAFIDNTHLQVLTLDD------NPSFSTLPVRLF----- 356

  Fly   557 NHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSIELL 621
                                |||                                   |:.|::.
Mosquito   357 --------------------HGN-----------------------------------PHLIDIS 366

  Fly   622 FINNNIIGQIQANTF-VDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDC 685
            ...|.:: .:.|..| :|  ||.|:.                             |.|||..|:|
Mosquito   367 MRRNALL-TLDAVQFPLD--RLQRLK-----------------------------LAGNPLVCNC 399

  Fly   686 SMEWLQRI--------------------------NNLTTRQHPHVVDLGNIECLMPHSRSAPLRP 724
            ::.||.|:                          .|:||   ..::|...|.|.:........|.
Mosquito   400 TIRWLWRLVTGTLDDDDGDDPDGVAFLGKALADHTNITT---VLLIDKDEIGCDLNEDGLVTRRI 461

  Fly   725 LASLSASDFVC 735
            |.::|..|..|
Mosquito   462 LRNMSEGDINC 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697 4/7 (57%)
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380 8/27 (30%)
LRR 210..592 CDD:443914 105/387 (27%)
leucine-rich repeat 212..236 CDD:275380 4/23 (17%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 8/22 (36%)
leucine-rich repeat 285..308 CDD:275380 0/22 (0%)
leucine-rich repeat 309..334 CDD:275380 10/24 (42%)
leucine-rich repeat 335..358 CDD:275380 7/22 (32%)
leucine-rich repeat 359..382 CDD:275380 9/22 (41%)
leucine-rich repeat 383..406 CDD:275380 9/26 (35%)
leucine-rich repeat 407..430 CDD:275380 7/22 (32%)
leucine-rich repeat 431..451 CDD:275380 6/20 (30%)
leucine-rich repeat 454..477 CDD:275380 6/22 (27%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 8/23 (35%)
leucine-rich repeat 526..548 CDD:275380 6/21 (29%)
leucine-rich repeat 590..617 CDD:275380 1/26 (4%)
leucine-rich repeat 618..641 CDD:275380 5/23 (22%)
leucine-rich repeat 642..689 CDD:275380 8/46 (17%)
LRRCT 679..736 CDD:214507 18/83 (22%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
LOC1270698XP_061512685.1 None
Blue background indicates that the domain is not in the aligned region.

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