DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and nrros

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001231915.1 Gene:nrros / 100498580 XenbaseID:XB-GENE-986206 Length:679 Species:Xenopus tropicalis


Alignment Length:822 Identity:184/822 - (22%)
Similarity:292/822 - (35%) Gaps:285/822 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 NSTFAGLIRLIVLNLS---NNALTRIGSKTFKELYF-------LQILDMRN-------------N 367
            |..|..|:..:.|.|.   |.|..::.:::..:|::       ||:|.:..             |
 Frog     3 NVFFWLLLAFMYLTLQWKYNGAEGKLSTESGCKLFYRVADCSHLQLLSVPQNLPTDIQELLLDFN 67

  Fly   368 SIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSI---VESQAFRNCS 429
            .|..:.:.:||..::|..|:|..||:..::...|||:..|..|:|.||.:|:   :.|.|.|...
 Frog    68 QIRFLHKNSFLRYHDLTNLSLRSNRMEFVEPGAFNGIRSLKVLSLQNNTISMEYELTSAALRLTP 132

  Fly   430 DLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVG 494
            .|||||||.|.||        :.|:..|              .:||..|..|.|.:|.|..:...
 Frog   133 SLKELDLSRNMLT--------MDMVSVL--------------HQNLTSLERLFLDNNIIMRLDQT 175

  Fly   495 MFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHL 559
            :|:.|..|..|:|..|.|..||.|.|:...:::.:.|..|.|..| |.| .|..:..||||.|:|
 Frog   176 VFEGLVHLKELSLQWNYIYEIEDGTFEGLVKLKKLDLAYNLLPCI-GDF-RLTQIQMLNLSFNNL 238

  Fly   560 VWF-----DYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNS-- 617
            .||     |..|   :|:.|||..|   .|..:..|..:.|:.||..|:||:...|.:...|:  
 Frog   239 EWFQSQETDVEF---HLEILDISNN---QLLFFPLLPRQHRLHTLLLSNNRMRFYGDIFGTNTSR 297

  Fly   618 IELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFE 682
            .:.|.:.|||            |.:..|||:::.:.                             
 Frog   298 ADFLIVENNI------------TSVTTVDLWSDDIH----------------------------- 321

  Fly   683 CDCSMEWLQRINNLTTRQHPHVVDLG-NIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCH 746
                       :||:|.   |.:|:. |.....||...:.:..||.|..                
 Frog   322 -----------SNLSTL---HYLDMSHNQFAFFPHGFFSNMSSLAYLKL---------------- 356

  Fly   747 CCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGH 811
                           |.:|.              |..:..|:.|...:.:|.|..|.:.||:..:
 Frog   357 ---------------NWNCL--------------QVFSVSPSNITSLLDELDLSNNELLELQADN 392

  Fly   812 LT-GRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEF----------RSLGL 865
            :: |..:|....|:::||..|.......:..:..:.:.||.|.....:|.          |::..
 Frog   393 ISPGILSLSYFNLSSNNLYNLPKNIFTSMTRIHTIDMSNNPLHLCSQSELRMGEGKCVDVRNVPS 457

  Fly   866 LRELYL-------------HNNMLTHIS------------------------------NAT--FE 885
            ||.|||             :.|.|||:.                              |.|  |.
 Frog   458 LRRLYLSGCGMELGLQRVFYGNTLTHLDLSYNNIKGITFLADTARTLQSLFLRSCLAFNITVDFS 522

  Fly   886 PLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIY 950
            ..:||.||.:..|.|::.|     .||.||                        |:...|.|:..
 Frog   523 VFMSLTVLDISGNALTTFP-----ASLTGL------------------------ALHYLDLHNNN 558

  Fly   951 CLDAGIKRELELIGNLA------NGPDCSDL-----------------LDASASN---------- 982
            .:...:.....|||:|.      |..||.:|                 :..|.||          
 Frog   559 LISLPLYNTQRLIGSLKIVYISNNSFDCCELGWMNVLIHSIRIPDLQKVTCSFSNRYFPVWNLPE 623

  Fly   983 --ISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFV-FRESV 1021
              ..|.|...||..|.||..:.|.:.|:|.|:::|: |::::
 Frog   624 SINHSCQWTNGGPWLYLLLTLPVCLTLLVALLLLFLTFKQTL 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 86/296 (29%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380 3/7 (43%)
leucine-rich repeat 335..358 CDD:275380 5/25 (20%)
leucine-rich repeat 359..382 CDD:275380 7/35 (20%)
leucine-rich repeat 383..406 CDD:275380 8/22 (36%)
leucine-rich repeat 407..430 CDD:275380 9/25 (36%)
leucine-rich repeat 431..451 CDD:275380 10/19 (53%)
leucine-rich repeat 454..477 CDD:275380 3/22 (14%)
leucine-rich repeat 478..499 CDD:275380 6/20 (30%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
leucine-rich repeat 526..548 CDD:275380 7/21 (33%)
leucine-rich repeat 590..617 CDD:275380 8/26 (31%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 3/46 (7%)
LRRCT 679..736 CDD:214507 11/57 (19%)
LRR <775..>920 CDD:443914 42/200 (21%)
leucine-rich repeat 775..796 CDD:275380 3/20 (15%)
leucine-rich repeat 797..817 CDD:275380 6/20 (30%)
leucine-rich repeat 818..841 CDD:275380 5/22 (23%)
leucine-rich repeat 842..865 CDD:275380 5/32 (16%)
leucine-rich repeat 866..889 CDD:275380 12/67 (18%)
leucine-rich repeat 890..911 CDD:275380 6/20 (30%)
TIR 1045..1183 CDD:214587
nrrosNP_001231915.1 LRR 7..342 CDD:443914 106/419 (25%)
leucine-rich repeat 39..58 CDD:275380 3/18 (17%)
leucine-rich repeat 59..82 CDD:275380 4/22 (18%)
leucine-rich repeat 83..106 CDD:275380 8/22 (36%)
leucine-rich repeat 107..133 CDD:275380 9/25 (36%)
leucine-rich repeat 134..158 CDD:275380 14/45 (31%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
leucine-rich repeat 183..206 CDD:275380 9/22 (41%)
leucine-rich repeat 207..227 CDD:275380 7/21 (33%)
leucine-rich repeat 228..251 CDD:275380 10/25 (40%)
LRR 231..>585 CDD:443914 96/488 (20%)
leucine-rich repeat 274..326 CDD:275380 17/103 (17%)
leucine-rich repeat 327..350 CDD:275380 5/25 (20%)
leucine-rich repeat 351..374 CDD:275380 8/67 (12%)
leucine-rich repeat 375..399 CDD:275380 6/23 (26%)
leucine-rich repeat 400..421 CDD:275380 5/20 (25%)
leucine-rich repeat 424..457 CDD:275380 5/32 (16%)
leucine-rich repeat 458..480 CDD:275380 5/21 (24%)
leucine-rich repeat 481..503 CDD:275380 3/21 (14%)
leucine-rich repeat 504..526 CDD:275380 3/21 (14%)
leucine-rich repeat 527..548 CDD:275380 10/49 (20%)
leucine-rich repeat 574..586 CDD:275378 2/11 (18%)
Blue background indicates that the domain is not in the aligned region.

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