DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100496647

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_002940742.3 Gene:LOC100496647 / 100496647 -ID:- Length:879 Species:Xenopus tropicalis


Alignment Length:1079 Identity:253/1079 - (23%)
Similarity:407/1079 - (37%) Gaps:307/1079 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 AVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHN---NISTLAPNALAGLSSLRVLNI 266
            |:.|||.|     :|.:   :|.....:|:......:|.|.   |..||            ||::
 Frog    19 AIIGGSAL-----AFGQ---IPKCTTTNRIAYFFYCNLTHMPPVNSDTL------------VLDL 63

  Fly   267 SYNHLVSLPSEAFAGNKELRELHL--QGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTF 329
            |:|:|..:.|..|....:|.:|:|  |..:...:.|........|:.|||:.|||..  :|:...
 Frog    64 SFNYLSEVNSTFFPRLLQLVDLNLGSQQTERLIVKKDSFRNTPSLVKLDLAYNQLLI--LDSDGL 126

  Fly   330 AGLIRLIVLNLSNNAL--TRIGSKTFKELYFLQILDMRNNSIGHIEEG-AFLPLYNLHTLNLAEN 391
            |||.:|.:|.|..|.|  :.:.:..||:|..|:.:|:.:|.|.::... .|..||:|..:||..|
 Frog   127 AGLSQLKILFLYYNKLNGSILENDYFKDLMSLEYVDLSSNEITYLRPNPLFYHLYSLDIINLRHN 191

  Fly   392 R--------LHTLDNRIFNGLYVLTKLTLNNNLVSIVES-------QAFRNCSDLKELDLSS--- 438
            :        ||:.:.:.|      |.:.|::|..:..|:       ..|||. :...|.||.   
 Frog   192 QISSICAGDLHSFERKYF------TIMELSHNRFNKWETLGSDRCGNPFRNI-EFDTLMLSGTGF 249

  Fly   439 --NQLTEVPEAVQDLSMLK-TLD-------LGENQISEFKNNTFRNLNQLTGLRLIDNRIGNI-- 491
              :::.:...|:....|:: .||       .|.|.|.:..|:||..|.. :.|:::|...|||  
 Frog   250 DVDKMQKFCGALNGTKMMQLKLDSHGMGAGFGYNHIKDPDNSTFVGLVN-SNLQILDLSTGNIFS 313

  Fly   492 ----TVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWL 552
                |.|   :|..|.:||||:|:|..||                       |..|..|.||:.|
 Frog   314 LKPYTFG---NLTVLKLLNLAENKINRIE-----------------------NKAFCGLNSLITL 352

  Fly   553 NLSENHL-VWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPN 616
            |||.|.| ..:||:|               |.|.:         :||:|                
 Frog   353 NLSYNLLGELYDYSF---------------EGLPD---------LTTID---------------- 377

  Fly   617 SIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPF 681
                  :..|.||.||.|.|....:|..:||..|.:.|::.       ..|..|:...:.|||..
 Frog   378 ------LQQNHIGAIQNNAFKSLEKLNYLDLRGNAMKKVTF-------FEALIPITYIFFGGNKL 429

  Fly   682 E-CDCSMEWLQRI----NNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHC 741
            : .|.|..:...:    |:|.        |||.:..::.:    ||.....|..:.....| ||.
 Frog   430 KSIDSSYVYSTFLDLSENDLN--------DLGGLFKILQY----PLLQYVILKRNRLSVCY-SHF 481

  Fly   742 PPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLD-GNNMP 805
                                                           .|.::.|.|:|| .:|| 
 Frog   482 -----------------------------------------------SISKNNSLLHLDLSDNM- 498

  Fly   806 ELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELY 870
                        :..::.|...|....|.||     |.:|.|.||.|..|....|..|..|:.|.
 Frog   499 ------------INLIWDNGQCLNVFSNLSL-----LGLLKLNNNFLRYLPEGIFNGLESLQTLN 546

  Fly   871 LHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQF 935
            |.:|:|||:....|.  .:|:.:.|..|:|.| |..:...|::.|.|..|.:.|.|..|..:...
 Frog   547 LSSNLLTHLMPGVFP--TNLDTVDLSKNQLYS-PSPKVFLSVKKLDLTHNQYICDCFLLDFIMWL 608

  Fly   936 VSDNAMVVRDAHDIYCL--DAGIKRELELIGNLANGPDCSDLLDASASNISSSQDLAGGYRLPLL 998
            ...||.::...:|.||:  ...:.:.|.::               :..|....:.|     :||:
 Frog   609 NETNATLLGSPYDTYCMYPPNFLFQPLHIL---------------TVENCDDDKVL-----MPLM 653

  Fly   999 AAVLVLI-FLVVVLIIVFVFRESVRMWLFAHY----GVRVCEPRFEDAGKL--YDAIILHSEKDY 1056
            .::.||. ..::||:...|.....|.:.||.|    |:.:...:.|:|...  |||.:.:|.||:
 Frog   654 FSLFVLTSTTILVLMSTVVTYTHYRGFCFATYKRILGLIIGNEKKEEAADACKYDAYLCYSSKDF 718

  Fly  1057 EFV----CRNIAAELEHGRPPFRLCIQQRDLPPQASHLQLVEGA-RASRKIILVLTRNLLATEWN 1116
            ::|    .||:..:. ..|..||||.::||..|...|:..:..| ..|:|.|.::|:..|...|.
 Frog   719 QWVQDAFLRNLDTQY-CDRNRFRLCFEERDFIPGEDHIVNIRDAIWNSKKTICIVTKQFLKDGWC 782

  Fly  1117 RIEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPY--LKSVPSNRLLTCDRY-------- 1171
            ......|.......|...|:::.          |..||.|  :|..|....:...:|        
 Frog   783 VEALNYAQSRYFTELKDVLIMVV----------VGSLSQYQFMKYQPIRAYVKRAQYLRWPEDIQ 837

  Fly  1172 ----FWEKLRYAI---------PIELSPRGNNYTLDHHE 1197
                |..:|.|.|         |.:.|.:..|:.|.:.|
 Frog   838 DVEWFLGRLSYQILKENTVEKKPNQASRKPFNHELQNIE 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR_RI 210..464 CDD:238064 71/289 (25%)
leucine-rich repeat 212..236 CDD:275380 4/23 (17%)
LRR_8 235..295 CDD:290566 16/64 (25%)
leucine-rich repeat 237..260 CDD:275380 5/25 (20%)
leucine-rich repeat 261..284 CDD:275380 7/22 (32%)
LRR_8 283..345 CDD:290566 20/63 (32%)
leucine-rich repeat 285..308 CDD:275380 5/24 (21%)
leucine-rich repeat 309..334 CDD:275380 11/24 (46%)
LRR_8 334..393 CDD:290566 19/69 (28%)
leucine-rich repeat 335..358 CDD:275380 8/24 (33%)
leucine-rich repeat 359..382 CDD:275380 6/23 (26%)
LRR_8 382..441 CDD:290566 17/78 (22%)
leucine-rich repeat 383..406 CDD:275380 7/30 (23%)
leucine-rich repeat 407..430 CDD:275380 7/29 (24%)
LRR_8 431..488 CDD:290566 16/69 (23%)
leucine-rich repeat 431..451 CDD:275380 4/24 (17%)
leucine-rich repeat 454..477 CDD:275380 9/30 (30%)
LRR_8 477..559 CDD:290566 27/87 (31%)
leucine-rich repeat 478..499 CDD:275380 7/26 (27%)
leucine-rich repeat 502..525 CDD:275380 9/22 (41%)
leucine-rich repeat 526..548 CDD:275380 3/21 (14%)
leucine-rich repeat 590..617 CDD:275380 3/26 (12%)
leucine-rich repeat 618..641 CDD:275380 7/22 (32%)
leucine-rich repeat 642..689 CDD:275380 12/47 (26%)
LRRCT 679..736 CDD:214507 11/61 (18%)
leucine-rich repeat 775..796 CDD:275380 1/20 (5%)
LRR_8 797..852 CDD:290566 15/55 (27%)
leucine-rich repeat 797..817 CDD:275380 5/20 (25%)
leucine-rich repeat 818..841 CDD:275380 5/22 (23%)
LRR_8 841..900 CDD:290566 20/58 (34%)
leucine-rich repeat 842..865 CDD:275380 9/22 (41%)
LRR_4 866..907 CDD:289563 14/40 (35%)
leucine-rich repeat 866..889 CDD:275380 8/22 (36%)
leucine-rich repeat 890..911 CDD:275380 6/20 (30%)
TIR 1045..1183 CDD:214587 40/165 (24%)
LOC100496647XP_002940742.3 leucine-rich repeat 158..182 CDD:275380 6/23 (26%)
leucine-rich repeat 183..260 CDD:275380 17/83 (20%)
leucine-rich repeat 261..300 CDD:275380 10/39 (26%)
LRR_8 299..359 CDD:404697 27/85 (32%)
leucine-rich repeat 301..324 CDD:275380 8/25 (32%)
leucine-rich repeat 325..348 CDD:275380 12/45 (27%)
leucine-rich repeat 349..372 CDD:275380 12/37 (32%)
leucine-rich repeat 373..396 CDD:275380 10/44 (23%)
leucine-rich repeat 419..446 CDD:275380 5/26 (19%)
leucine-rich repeat 464..488 CDD:275380 5/71 (7%)
leucine-rich repeat 489..541 CDD:275380 19/69 (28%)
leucine-rich repeat 542..563 CDD:275380 8/22 (36%)
leucine-rich repeat 564..582 CDD:275380 6/18 (33%)
TIR 706..841 CDD:214587 35/145 (24%)
leucine-rich repeat 60..81 CDD:275380 7/20 (35%)
leucine-rich repeat 82..107 CDD:275380 5/24 (21%)
LRR_8 106..168 CDD:404697 22/63 (35%)
leucine-rich repeat 108..131 CDD:275380 11/24 (46%)
leucine-rich repeat 132..157 CDD:275380 8/24 (33%)
PLN00113 158..>594 CDD:215061 139/603 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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