DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and XB5889249

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017950848.2 Gene:XB5889249 / 100495326 XenbaseID:XB-GENE-5889250 Length:796 Species:Xenopus tropicalis


Alignment Length:996 Identity:211/996 - (21%)
Similarity:360/996 - (36%) Gaps:326/996 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 FAGNKEL---RELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNL 340
            |..||.|   |:||          |..........:||.:...:|  |:..|.|...::|.:|||
 Frog    24 FESNKALIIQRKLH----------KCFSSCPSVCTLLDFTKENIT--HLKTSDFNCFLQLRLLNL 76

  Fly   341 SNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLY 405
            |:|.:..:....||....|:.||:.||.:..|:..:...:.|:..::|:.|...|:|        
 Frog    77 SHNLIGELDCSVFKFNPSLEYLDISNNRLHTIKCHSLQYIKNIKRMDLSYNNFKTMD-------- 133

  Fly   406 VLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTE---VPEAVQDLSMLKTLDLG-ENQISE 466
                           ....|...|.||.|.|||.::.:   :..|..||..   :.|| ||:| |
 Frog   134 ---------------FCSEFTALSQLKHLGLSSKKIQKDSFINIASMDLDF---VFLGIENEI-E 179

  Fly   467 FKNNT--FRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEA- 528
            ::|.:  |.|.|:| .:.|..|                  |:||.:.:.|   .|.|.:..:|. 
 Frog   180 YENGSLQFLNTNKL-HINLQPN------------------LSLASSYLLS---DALDTSMTLEVS 222

  Fly   529 -----IRLD---KNFLTDINGIFATLASLLWLN--LSENHL------VWFDYAFIPSNLKWLDIH 577
                 :..|   |:|.| ||. .:.:.:|:..|  :..|.:      :|      .|:::.|.| 
 Frog   223 GAQCDVHCDYFTKSFFT-INK-NSKVVNLIISNSTMPGNEMLKIIPPIW------DSSVEHLHI- 278

  Fly   578 GNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRL 642
                    ..::|.:|.:...:|.:|:.|         .|..|.:..|::.              
 Frog   279 --------KMFRLIKEFKYVKMDFTHHSI---------KSFTLEYFTNDVF-------------- 312

  Fly   643 ARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDL 707
                                           |:.|.:||.....|    .:.|:|      ..:.
 Frog   313 -------------------------------FFQGTHPFNIFAEM----LVENVT------FSNA 336

  Fly   708 GNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEY-----EQCECEVICPGNCSCFH 767
            |.|...                           |||......:     .:...|:..  |||..:
 Frog   337 GMIHFF---------------------------CPPVPSIVRFLNLPSNRITDEIFL--NCSSLN 372

  Fly   768 DATWATNIVDCGRQDLAALP-NRIPQ--DVSDLYLDGNNMPELEVG----HLTGRR------NLR 819
            :.            :|..|. |::.|  .:|.:.|...|:..|::.    |:...:      :|.
 Frog   373 EL------------ELLNLQNNKLEQMSKISSMTLKMKNLKHLDLSKNGLHIDNEKQCNWMDSLV 425

  Fly   820 ALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLT------H 878
            .|.|:.|.|.....|.|.  :||::|.|..|:::::. .|.::...|:||:|.:|.||      :
 Frog   426 FLNLSESGLTNSVFGCLP--INLQILDLSKNQISSIP-IEVKNFVSLKELHLASNRLTDIPDCHN 487

  Fly   879 ISNATFEPLVSLEVLRLDNNRLSSLP--HLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAM 941
            |.|       :|.||::|.|.::..|  .||....:|.|:.|:|.:.|.|    :|.:||....|
 Frog   488 IGN-------NLGVLKVDENFINLPPKEFLQNCEYVQYLSAGQNPFQCNC----DLREFVKMGVM 541

  Fly   942 VVRDAHDIYCLDAGIKRELELIGNLANGPD---CSD--------LLDASASNISSSQDLAGGYRL 995
            ..:                    .|...|:   |:|        |.|...|.||.:..|      
 Frog   542 FPK--------------------RLVGWPESYKCADPENVKGIFLQDFHLSEISCNTSL------ 580

  Fly   996 PLLAAVLVLIFLVVVLIIVFVFRESV----RM---WLFAHYGVRVCEPRFEDAGKLYDAIILHSE 1053
             .|..||..||:|.::::...|...|    ||   |....:.:|....:.....||:.|.|.:|:
 Frog   581 -FLGVVLGTIFVVSIIVVSACFYFDVPWYIRMLFRWFRTKHRLRNVNQQDIQNDKLFHAFISYSQ 644

  Fly  1054 KDYEFVCRNIAAELEHGRPPFRLCIQQRD-LPPQASHLQLVEGARASRKIILVLTRNLLATEWNR 1117
            :|.::|...:...||......::|..:|. :|.:|....:::....|.|.|.||:.|.:.::|..
 Frog   645 EDSDWVKNMLLPNLERKDGSIKICHHERHFIPGKAIIENIIDCIEKSFKSIFVLSPNFIQSDWCH 709

  Fly  1118 IEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPYLK-SVPS--NRLLTCDRY-------- 1171
            .|...|.|......:..|::|             .|.|..: |:|:  |:|.:..::        
 Frog   710 YELYFAQHTLFGKNSNNLILI-------------LLDPIPQYSIPNKYNKLRSIMKHRTYLEWPK 761

  Fly  1172 -------FWEKLRYAIPIELS 1185
                   ||..||.||.:.||
 Frog   762 EKGKHALFWANLREAIHVNLS 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR_RI 210..464 CDD:238064 48/191 (25%)
leucine-rich repeat 212..236 CDD:275380
LRR_8 235..295 CDD:290566 7/18 (39%)
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380 2/4 (50%)
LRR_8 283..345 CDD:290566 18/64 (28%)
leucine-rich repeat 285..308 CDD:275380 5/25 (20%)
leucine-rich repeat 309..334 CDD:275380 6/24 (25%)
LRR_8 334..393 CDD:290566 17/58 (29%)
leucine-rich repeat 335..358 CDD:275380 8/22 (36%)
leucine-rich repeat 359..382 CDD:275380 6/22 (27%)
LRR_8 382..441 CDD:290566 13/58 (22%)
leucine-rich repeat 383..406 CDD:275380 4/22 (18%)
leucine-rich repeat 407..430 CDD:275380 1/22 (5%)
LRR_8 431..488 CDD:290566 22/62 (35%)
leucine-rich repeat 431..451 CDD:275380 7/22 (32%)
leucine-rich repeat 454..477 CDD:275380 9/25 (36%)
LRR_8 477..559 CDD:290566 19/92 (21%)
leucine-rich repeat 478..499 CDD:275380 3/20 (15%)
leucine-rich repeat 502..525 CDD:275380 6/22 (27%)
leucine-rich repeat 526..548 CDD:275380 7/30 (23%)
leucine-rich repeat 590..617 CDD:275380 5/26 (19%)
leucine-rich repeat 618..641 CDD:275380 2/22 (9%)
leucine-rich repeat 642..689 CDD:275380 5/46 (11%)
LRRCT 679..736 CDD:214507 7/56 (13%)
leucine-rich repeat 775..796 CDD:275380 4/23 (17%)
LRR_8 797..852 CDD:290566 16/64 (25%)
leucine-rich repeat 797..817 CDD:275380 4/29 (14%)
leucine-rich repeat 818..841 CDD:275380 7/22 (32%)
LRR_8 841..900 CDD:290566 20/64 (31%)
leucine-rich repeat 842..865 CDD:275380 5/22 (23%)
LRR_4 866..907 CDD:289563 15/48 (31%)
leucine-rich repeat 866..889 CDD:275380 9/28 (32%)
leucine-rich repeat 890..911 CDD:275380 8/22 (36%)
TIR 1045..1183 CDD:214587 35/156 (22%)
XB5889249XP_017950848.2 leucine-rich repeat 48..70 CDD:275378 6/23 (26%)
PLN00113 50..>484 CDD:215061 122/609 (20%)
LRR_8 70..129 CDD:404697 17/58 (29%)
leucine-rich repeat 71..94 CDD:275378 8/22 (36%)
leucine-rich repeat 95..118 CDD:275378 6/22 (27%)
leucine-rich repeat 119..143 CDD:275378 5/46 (11%)
LRR <398..>524 CDD:227223 36/135 (27%)
leucine-rich repeat 400..423 CDD:275380 2/22 (9%)
leucine-rich repeat 424..445 CDD:275378 7/22 (32%)
leucine-rich repeat 446..468 CDD:275378 5/22 (23%)
leucine-rich repeat 469..491 CDD:275378 9/28 (32%)
leucine-rich repeat 492..515 CDD:275378 8/22 (36%)
leucine-rich repeat 516..528 CDD:275378 4/11 (36%)
LRRCT 524..576 CDD:214507 15/75 (20%)
TIR 636..777 CDD:214587 33/153 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X221
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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