DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and tlr9

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017948709.2 Gene:tlr9 / 100494387 XenbaseID:XB-GENE-486908 Length:1035 Species:Xenopus tropicalis


Alignment Length:1138 Identity:248/1138 - (21%)
Similarity:433/1138 - (38%) Gaps:303/1138 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLD 216
            |..|.||.|....:..:|:|.:|||:.| .:.:....:.| :|  ..:...:..||..| |..||
 Frog    74 LAINEIRLLANSTFSGVPNLVILNLSDN-CQPSNLRPYKE-IC--RLIIEPHALVSLKS-LTNLD 133

  Fly   217 VSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVS-------L 274
            :|.|.|.|:|..     ...::.|:|..|.|..::....:.|::::::.:.||...|       |
 Frog   134 LSGNSLTSIPPL-----PENIKFLNLNLNQIHMISGWEFSRLNNVKMIRLGYNCFYSKQCEPFHL 193

  Fly   275 PSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLN 339
            ...||..|:.|.||.|..|::...|:.|   ...:.:||||.|:::.  :|......|..|..|:
 Frog   194 SDSAFINNEFLEELALSFNNITSFPQNL---PSSIRILDLSENKISK--IDREDLCNLNNLHSLD 253

  Fly   340 LSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGL 404
            |..|.  :......:..|     ..:|||...:..|.|..|:.|..|||..|.||||.:.:|:.|
 Frog   254 LQWNC--QRCDHALQACY-----PCKNNSALLLVPGVFDCLHKLSYLNLRGNSLHTLHSSLFSSL 311

  Fly   405 YVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKN 469
            ..|:.|.|::|.:::.....|...:::|||:|..|        .:..||.:.|.|..| ::..| 
 Frog   312 TNLSHLVLSDNFLNLETETFFSALTNVKELNLDFN--------FKPYSMYERLVLNSN-VARMK- 366

  Fly   470 NTFRNLNQLTGLRLIDNRIGNITVGMFQD-------LPRLSVLNLAKNRIQSIERGAFDKNTEIE 527
                :|.::|            .||.|.:       :|.||:.||.:                  
 Frog   367 ----SLERIT------------IVGYFFNVLDEEGIMPLLSLPNLRE------------------ 397

  Fly   528 AIRLDKNFLTDIN-GIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQ 591
             |.|..||:..:| .:..|...|.:::||||.:.:.::.           ||..:......:...
 Frog   398 -ISLRTNFILKVNLSMLFTHKPLRFISLSENLISFEEHK-----------HGQKLAMHPPLFDRG 450

  Fly   592 EEIRVTTLDASH--NRITEIGAMSVP------NSIELLFINNNIIGQIQANTFVDKTRLARVDLY 648
            .::....:| ||  .:..|.|.:..|      :|::|.|   |.||.|                 
 Frog   451 NQVDGGWMD-SHCGPKQVEAGEVEYPGCWQYNHSVDLSF---NNIGSI----------------- 494

  Fly   649 ANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFEC-DCSMEWL-QRINNLTTRQHPHVVDLGNIE 711
                                  .|:.:||.:..|| :.|..:: ||:|.   .|..|:..|.:::
 Frog   495 ----------------------YPDEFLGMDEIECLNMSYNYINQRLNG---TQFGHLKSLRHLD 534

  Fly   712 CLMPHSR----------SAPLRPLASLSASD--FVCK---------------------------- 736
              :.|:|          ..|...:.:|:.:|  |:.|                            
 Frog   535 --LSHNRFDMYYYKALSELPRLKILNLAHNDYQFMMKGVNHRLDFLENLTSLVELNLNNNFIGLR 597

  Fly   737 ----YESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWA---TN-----IVDCGRQDLAALPN- 788
                .:||...|......|.        |:...:...|:.   ||     |:|.....|..:|| 
 Frog   598 ITRELKSHSLETLRFRNNEL--------GSSWQYGKDTYLNMFTNLRSLKILDISYNQLPVIPNE 654

  Fly   789 ---RIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENN 850
               ::|:.:..|.|..|.:............||..|.| ..|.:|....:|.: .|:..|:|..|
 Frog   655 VLEKLPESLQKLNLSHNKLYTFNWAKTAHLGNLAILDL-GFNALTKLRANLTE-SNIAFLNLTYN 717

  Fly   851 KLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGL 915
            |:.:|:...|.|...|::|.|.||::..|                   .::|.| :.:..:|..|
 Frog   718 KINSLDKDFFDSFSELKQLILSNNLIKTI-------------------HITSFP-INFLQNLDSL 762

  Fly   916 TLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLANGPDCSDLLDASA 980
            .:..|.:.|.|:....:. |:.:..:.|..      |..|:|         .:.||........:
 Frog   763 DVSGNPFQCTCKAYWFIT-FLMETEVTVDH------LSTGMK---------CDSPDSLRGRSLLS 811

  Fly   981 SNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFAHYGV---RVCEPRFEDAG 1042
            .:..|.|:|.|  .:..:.:.:::|||:|:..|..:|  ...:|...|..|   |......:.:.
 Frog   812 MDPQSCQELYG--HVCFIWSSILVIFLMVIPTIWNLF--FWNLWYAGHLIVATLRSYTKLHDKST 872

  Fly  1043 KLYDAIILHSEKD---YEFVCRNIAAELEH-GRPPFRLCIQQRD-LPPQASHLQLVEGARASRKI 1102
            :.:||.|..:.|:   .::|...:..:||. .|..|.||:::|| :..::|...|.:....|:|.
 Frog   873 EHFDAFIAFNTKNSSVRDWVYNELLVQLESPERGGFTLCLEERDWIAGRSSIENLYDSIYRSKKT 937

  Fly  1103 ILVLTRNLLATEW-NRIEFRNAFHESLRGLAQK------LVIIEETSVSAEAEDVAELSPYLKSV 1160
            |.::||     || |....|:||..|.:.|..:      ||:::..         .::|.|..: 
 Frog   938 IFIITR-----EWFNCGLLRHAFFMSNQRLLDEKKDVVALVVLDHK---------MKMSQYFLT- 987

  Fly  1161 PSNRLLTCDR-------------YFWEKLRYAI 1180
               |...|.:             :||..||..|
 Frog   988 ---RKRLCPKSFLNWPCNPKAHSHFWHMLRIYI 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566 11/28 (39%)
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380 5/17 (29%)
leucine-rich repeat 171..201 CDD:275380 7/29 (24%)
LRR_RI 210..464 CDD:238064 72/260 (28%)
leucine-rich repeat 212..236 CDD:275380 8/23 (35%)
LRR_8 235..295 CDD:290566 17/66 (26%)
leucine-rich repeat 237..260 CDD:275380 5/22 (23%)
leucine-rich repeat 261..284 CDD:275380 7/29 (24%)
LRR_8 283..345 CDD:290566 18/61 (30%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 7/24 (29%)
LRR_8 334..393 CDD:290566 16/58 (28%)
leucine-rich repeat 335..358 CDD:275380 4/22 (18%)
leucine-rich repeat 359..382 CDD:275380 6/22 (27%)
LRR_8 382..441 CDD:290566 21/58 (36%)
leucine-rich repeat 383..406 CDD:275380 11/22 (50%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
LRR_8 431..488 CDD:290566 13/56 (23%)
leucine-rich repeat 431..451 CDD:275380 5/19 (26%)
leucine-rich repeat 454..477 CDD:275380 5/22 (23%)
LRR_8 477..559 CDD:290566 20/89 (22%)
leucine-rich repeat 478..499 CDD:275380 4/27 (15%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 6/22 (27%)
leucine-rich repeat 590..617 CDD:275380 6/34 (18%)
leucine-rich repeat 618..641 CDD:275380 6/22 (27%)
leucine-rich repeat 642..689 CDD:275380 6/47 (13%)
LRRCT 679..736 CDD:214507 15/70 (21%)
leucine-rich repeat 775..796 CDD:275380 6/24 (25%)
LRR_8 797..852 CDD:290566 14/54 (26%)
leucine-rich repeat 797..817 CDD:275380 3/19 (16%)
leucine-rich repeat 818..841 CDD:275380 6/22 (27%)
LRR_8 841..900 CDD:290566 14/58 (24%)
leucine-rich repeat 842..865 CDD:275380 7/22 (32%)
LRR_4 866..907 CDD:289563 8/40 (20%)
leucine-rich repeat 866..889 CDD:275380 6/22 (27%)
leucine-rich repeat 890..911 CDD:275380 2/20 (10%)
TIR 1045..1183 CDD:214587 39/161 (24%)
tlr9XP_017948709.2 leucine-rich repeat 69..92 CDD:275380 5/17 (29%)
PLN00113 82..>592 CDD:215061 139/635 (22%)
leucine-rich repeat 93..128 CDD:275380 9/38 (24%)
leucine-rich repeat 129..148 CDD:275380 8/23 (35%)
leucine-rich repeat 149..172 CDD:275380 5/22 (23%)
leucine-rich repeat 173..203 CDD:275380 7/29 (24%)
leucine-rich repeat 204..224 CDD:275380 7/22 (32%)
leucine-rich repeat 225..248 CDD:275380 7/24 (29%)
leucine-rich repeat 249..289 CDD:275380 11/46 (24%)
leucine-rich repeat 290..311 CDD:275380 10/20 (50%)
leucine-rich repeat 314..337 CDD:275380 5/22 (23%)
leucine-rich repeat 353..394 CDD:275380 12/58 (21%)
leucine-rich repeat 395..418 CDD:275380 7/41 (17%)
leucine-rich repeat 482..504 CDD:275380 10/63 (16%)
leucine-rich repeat 505..529 CDD:275380 8/26 (31%)
leucine-rich repeat 530..553 CDD:275380 3/24 (13%)
inl_like_NEAT_1 <534..>767 CDD:411101 49/264 (19%)
leucine-rich repeat 554..583 CDD:275380 4/28 (14%)
leucine-rich repeat 584..637 CDD:275380 8/60 (13%)
leucine-rich repeat 607..629 CDD:275380 4/29 (14%)
leucine-rich repeat 638..662 CDD:275380 6/23 (26%)
leucine-rich repeat 663..686 CDD:275380 3/22 (14%)
leucine-rich repeat 687..708 CDD:275380 6/22 (27%)
leucine-rich repeat 709..732 CDD:275380 7/22 (32%)
leucine-rich repeat 733..751 CDD:275380 6/36 (17%)
PCC 738..>821 CDD:188093 20/118 (17%)
TIR_2 875..1017 CDD:419986 38/159 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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