DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and tlr6

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017950845.1 Gene:tlr6 / 100493946 XenbaseID:XB-GENE-492949 Length:842 Species:Xenopus tropicalis


Alignment Length:969 Identity:196/969 - (20%)
Similarity:348/969 - (35%) Gaps:289/969 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 LLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIE 373
            ||:...|..|.....:..|..|        |.||..|..: .|....|  ..:||:..|||..:|
 Frog     7 LLIYLSSSGQCVRQEIFESHIA--------NYSNKFLFAV-PKNLSSL--TTVLDISFNSIATME 60

  Fly   374 EGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSS 438
            ...|..:::|..||.:.|::..|::.||.....|..|..::|::..: |..|.  |.::.||:|.
 Frog    61 TSEFNYIFDLQVLNASYNKMKYLNSSIFKFNTQLQYLDFSHNVLRNI-SGTFP--SHIQHLDISF 122

  Fly   439 N--QLTEVPEAVQDLSMLKTLDLGENQI--SEFK-------NNTFRNLNQLT-----GLRLIDNR 487
            |  |...|.....::.:|:.|.||.:||  |:|:       ...|..||.|.     .|.|::.:
 Frog   123 NNFQTLSVCSGFGNMVLLEYLGLGADQILKSDFEGIVHLHLKEVFIELNSLNDYENGSLLLLNTK 187

  Fly   488 IGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDK-NTEIEAIRLDKNFLTDINGIFATLASLLW 551
            ...:..|:..:..|.:||..|.|....:|.....: |..|:    .|.::               
 Frog   188 KLTLDFGVLSNEDRYNVLFDAVNTTSVLELSHLQRWNIHID----PKKYI--------------- 233

  Fly   552 LNLSENHLVWFDYAFIPSNLKWLDI--------HGNYIEALGNY-YKLQEEIRVTTLDASHNRIT 607
            .|:.:|..| .|......|::|..|        |.: :|.|..| :.|:..|..|:.|.|:..:.
 Frog   234 FNIVQNSKV-TDLTMRHVNVEWKMIVLALQYIWHSS-VETLTFYDFSLKGLIAKTSFDYSNTSVK 296

  Fly   608 EIGAMSV--------PNSIELLFINNNI-------------IGQIQANTF--VDKTRLARV-DLY 648
            .:....|        .:|:..:|.|.||             :..:.::||  :|.:..|.. ||:
 Frog   297 AVNVQGVNVGVFQFDQSSVYRVFSNMNIENLTLNFASLLFMVCPLNSSTFQSIDFSHNALTDDLF 361

  Fly   649 ANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECL 713
            .:..:.|:|..|::.....||                    :.:::.:|..              
 Frog   362 KDCFTLINLKRLKLRKNKLEK--------------------IYKLSAMTEN-------------- 392

  Fly   714 MPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDC 778
            ||        .|..|.||..:..|:..   .||                        |:.|||:.
 Frog   393 MP--------SLEYLDASHNLLAYDEE---DCH------------------------WSQNIVEL 422

  Fly   779 GRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLR 843
                                                  ||.:.:|.||....|.       ::::
 Frog   423 --------------------------------------NLASNFLTASIFKCLP-------ISIK 442

  Fly   844 VLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRL--SSLPHL 906
            :|.||:|.:|.:. :....|..|.||.|..|.|..:.:.:  .:.||.:|.::.|::  .|:..:
 Frog   443 ILILESNDITHVP-SGVTHLDDLVELNLSFNRLGDLPDCS--NISSLSLLGVEGNQILYPSIESI 504

  Fly   907 QYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLANGPD 971
            :....::.::.|:|.:.|.|    ||.:|                    |.:|.|..|.|...|:
 Frog   505 ESCSRVKHISAGQNPFQCNC----ELRRF--------------------INQEKEAPGTLIGWPE 545

  Fly   972 C-----------SDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFV--------F 1017
            .           :.|.|...|.|:.:        :.:|..|::|..::.:.:|:.:        |
 Frog   546 AYVCKYPDHLRGTMLKDFYISEITCN--------VFILIPVIILPIIISIALIIGLCKYLDGPWF 602

  Fly  1018 RESVRMWLFAHYGVRVCEPRFEDAGKLYD--AIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQ 1080
            .:.:..:.......|..:..::...:.:|  |.|.:||.|..:|.......:|......|:|..:
 Frog   603 LKMIWQYTRTKQRTRTSKQGYQSLQRDFDFNAFISYSEHDASWVKNIFLPSIERSNDCIRICQHE 667

  Fly  1081 RDLPPQASHLQ-LVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSVS 1144
            |:..|..|.:: ::.....|.|.|.:|:.|.:.:||...|...|.|:........|::|      
 Frog   668 RNFIPGKSIIENIINCIEKSYKSIFILSPNFVQSEWCHYELYFAHHKLYTENNDNLILI------ 726

  Fly  1145 AEAEDVAELSP-YLKSVPSN----RLLTCDR-------------YFWEKLRYAIPIELS 1185
                 :.|..| ||  :||.    :.|...|             .||..||.||.|:|:
 Frog   727 -----LLEPIPQYL--IPSKYYKLKTLMAQRTYLEWPSEKSKHGLFWANLRAAISIDLT 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 74/308 (24%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380 6/24 (25%)
leucine-rich repeat 335..358 CDD:275380 6/22 (27%)
leucine-rich repeat 359..382 CDD:275380 7/22 (32%)
leucine-rich repeat 383..406 CDD:275380 7/22 (32%)
leucine-rich repeat 407..430 CDD:275380 5/22 (23%)
leucine-rich repeat 431..451 CDD:275380 6/21 (29%)
leucine-rich repeat 454..477 CDD:275380 10/31 (32%)
leucine-rich repeat 478..499 CDD:275380 4/25 (16%)
leucine-rich repeat 502..525 CDD:275380 6/23 (26%)
leucine-rich repeat 526..548 CDD:275380 2/21 (10%)
leucine-rich repeat 590..617 CDD:275380 6/34 (18%)
leucine-rich repeat 618..641 CDD:275380 7/37 (19%)
leucine-rich repeat 642..689 CDD:275380 8/47 (17%)
LRRCT 679..736 CDD:214507 7/56 (13%)
LRR <775..>920 CDD:443914 26/146 (18%)
leucine-rich repeat 775..796 CDD:275380 2/20 (10%)
leucine-rich repeat 797..817 CDD:275380 0/19 (0%)
leucine-rich repeat 818..841 CDD:275380 5/22 (23%)
leucine-rich repeat 842..865 CDD:275380 6/22 (27%)
leucine-rich repeat 866..889 CDD:275380 6/22 (27%)
leucine-rich repeat 890..911 CDD:275380 4/22 (18%)
TIR 1045..1183 CDD:214587 39/158 (25%)
tlr6XP_017950845.1 LRR <38..264 CDD:443914 59/251 (24%)
leucine-rich repeat 46..69 CDD:275378 7/22 (32%)
leucine-rich repeat 70..93 CDD:275378 7/22 (32%)
leucine-rich repeat 94..114 CDD:275378 5/22 (23%)
leucine-rich repeat 115..139 CDD:275378 6/23 (26%)
LRR <320..>508 CDD:443914 51/304 (17%)
leucine-rich repeat 347..369 CDD:275380 4/21 (19%)
leucine-rich repeat 370..395 CDD:275380 7/66 (11%)
leucine-rich repeat 396..418 CDD:275380 8/48 (17%)
leucine-rich repeat 419..440 CDD:275380 8/65 (12%)
leucine-rich repeat 441..463 CDD:275380 6/22 (27%)
leucine-rich repeat 464..485 CDD:275380 6/22 (27%)
leucine-rich repeat 486..509 CDD:275380 4/22 (18%)
LRRCT 518..570 CDD:214507 16/75 (21%)
TIR 632..775 CDD:214587 38/155 (25%)
Blue background indicates that the domain is not in the aligned region.

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