DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100485927

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017946494.1 Gene:LOC100485927 / 100485927 -ID:- Length:782 Species:Xenopus tropicalis


Alignment Length:918 Identity:203/918 - (22%)
Similarity:336/918 - (36%) Gaps:270/918 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 LNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFN 402
            ||||:||:..:.....|....||.|.::.|:|..|.:|:|.||.||..|:|:             
 Frog    53 LNLSSNAIQIVTETDLKPYDQLQTLLLQYNAIHTINDGSFQPLGNLEELDLS------------- 104

  Fly   403 GLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEF 467
                      .|||| ::.|..|||.:.||.|:|..||.               :.||.:.:   
 Frog   105 ----------YNNLV-LLSSVWFRNLNKLKHLNLLGNQY---------------ITLGNDSL--- 140

  Fly   468 KNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLD 532
                |.:|:.|:.|:..:.....|....|:.|.||:.|.:...::...|.|:..:..:|      
 Frog   141 ----FASLSSLSSLQFGNQNFDAIQKQSFEGLERLNTLEINAAQLTLYEEGSLGRMKQI------ 195

  Fly   533 KNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVT 597
                         ..::|.:||:          .:|:.||.| :|.                 ||
 Frog   196 -------------YHTILRVNLT----------LLPALLKDL-VHS-----------------VT 219

  Fly   598 TLDASHNRITEIGAMSVPNSIELL-------FINNNIIGQIQANTFVDKTRLARVDL---YANVL 652
            .|:.:.   ||....:...:.|:|       ||..|.       |.||.:....|::   |.|:.
 Frog   220 LLEITD---TEFSTPADMQAFEVLAYTSVKQFIFRNC-------TIVDVSGYRFVEIIQTYRNIT 274

  Fly   653 SKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQR---------INNLTTRQHPHVVDLG 708
            ..:..|.               .|.|...:|..    |:|         |||:....:....||.
 Frog   275 DVVMKNC---------------RLLGRGLDCPN----LKRTTSSVTTIIINNIEVSLYYIFSDLS 320

  Fly   709 NIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQC------------ECEVICPG 761
            ::..::|                .|.....:..|.....|::.|.            :.:....|
 Frog   321 SLHQIIP----------------QFTYVTVTDSPVYLIPCQFSQSFTSLQYLDVSGGKLDNTYLG 369

  Fly   762 NCSCFHDATWA---TNIVDCGRQDLAALPNRIPQDVSDL-YLDG-----NNMPELEVGHLTGRRN 817
            :..|:|:...|   ...::..|..|.::| ::.|.:|.| ||..     |...||........:|
 Frog   370 SSVCYHEGGGACPKLQTLNVSRNLLTSVP-KVAQFLSGLNYLTNLDISQNKFSELSTSKCQWPKN 433

  Fly   818 LRALYLNASNLMTLQNGSLAQLV--NLRVLHLENNKLT--ALEGTEFRSLGLLRELYLHNNMLTH 878
            |:  |||.||   .|...:...:  .|::|.:.:|.||  |:|      :..|.|||:.||.|:.
 Frog   434 LK--YLNISN---NQINIITTCIPPTLQILDVSSNYLTVFAIE------MPNLTELYISNNRLSK 487

  Fly   879 ISNAT-FEPLVSLEVLRLDNNRL--SSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNA 940
            :.... |..||.|.:.|.|.|..  |.|.....|..|....   |.:.|.||.|    .|:..|.
 Frog   488 LPEGMYFTSLVLLSISRNDLNGFGQSDLELFSNRTILDARA---NNYKCSCQFL----DFIRSNT 545

  Fly   941 MVVRDAHDIY-CLDAGIKRELELIGNLANGPD--CSDLLDASASNISSSQDLAGGYRLPLLAAVL 1002
            .|:....|.| |......:::::  ..||.|.  |...|..:.|.|.            |:|.|.
 Frog   546 AVLVGWPDNYKCASPASVKDVQI--QDANLPPLVCHKTLIVTLSCIL------------LIALVA 596

  Fly  1003 VLIFLVVVLIIVFVFRESVRMWLFA-HYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAE 1066
            .::.|...|.:|: :.:....||.| ...::.|     |....:|..:.:||:|.|:|...:..:
 Frog   597 AIVALCHFLHVVW-YAKMTWAWLKAKRKPLKNC-----DREICFDGFVSYSERDSEWVENMMVPK 655

  Fly  1067 LEHGRPPFRLCIQQRDLPPQASHL-QLVEGARASRKIILVLTRNLLATEWNRIE-----FRNAFH 1125
            ||:.....:||:.:||..|....: .:::....|.|.:.||:.:.:.:||.:.|     ||    
 Frog   656 LENATLAMKLCLHKRDFVPGKWIIDNIIDAMEKSYKTVFVLSEHFVRSEWCKYELEFSHFR---- 716

  Fly  1126 ESLRGLAQKLVIIEETSVSAEAEDVAELSPYLK-SVPS-----NRLLTCDRY------------F 1172
                       :.:|.:.||   .:..|.|..| :||.     .:|:....|            |
 Frog   717 -----------LFDENNDSA---ILILLDPIEKETVPKRFCKLRKLMNTKTYLEWPTDEEQQEVF 767

  Fly  1173 WEKLRYAI 1180
            |:.|:.|:
 Frog   768 WDNLKTAL 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR_RI 210..464 CDD:238064 37/125 (30%)
leucine-rich repeat 212..236 CDD:275380
LRR_8 235..295 CDD:290566
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
LRR_8 283..345 CDD:290566 5/6 (83%)
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
LRR_8 334..393 CDD:290566 21/54 (39%)
leucine-rich repeat 335..358 CDD:275380 7/19 (37%)
leucine-rich repeat 359..382 CDD:275380 10/22 (45%)
LRR_8 382..441 CDD:290566 17/58 (29%)
leucine-rich repeat 383..406 CDD:275380 3/22 (14%)
leucine-rich repeat 407..430 CDD:275380 8/22 (36%)
LRR_8 431..488 CDD:290566 12/56 (21%)
leucine-rich repeat 431..451 CDD:275380 6/19 (32%)
leucine-rich repeat 454..477 CDD:275380 4/22 (18%)
LRR_8 477..559 CDD:290566 14/81 (17%)
leucine-rich repeat 478..499 CDD:275380 4/20 (20%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 1/21 (5%)
leucine-rich repeat 590..617 CDD:275380 5/26 (19%)
leucine-rich repeat 618..641 CDD:275380 8/29 (28%)
leucine-rich repeat 642..689 CDD:275380 7/49 (14%)
LRRCT 679..736 CDD:214507 10/65 (15%)
leucine-rich repeat 775..796 CDD:275380 4/20 (20%)
LRR_8 797..852 CDD:290566 17/62 (27%)
leucine-rich repeat 797..817 CDD:275380 6/25 (24%)
leucine-rich repeat 818..841 CDD:275380 7/24 (29%)
LRR_8 841..900 CDD:290566 21/61 (34%)
leucine-rich repeat 842..865 CDD:275380 7/24 (29%)
LRR_4 866..907 CDD:289563 16/43 (37%)
leucine-rich repeat 866..889 CDD:275380 9/23 (39%)
leucine-rich repeat 890..911 CDD:275380 7/22 (32%)
TIR 1045..1183 CDD:214587 36/160 (23%)
LOC100485927XP_017946494.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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