DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100485927

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_017946494.1 Gene:LOC100485927 / 100485927 XenbaseID:XB-GENE-29078063 Length:782 Species:Xenopus tropicalis


Alignment Length:918 Identity:203/918 - (22%)
Similarity:336/918 - (36%) Gaps:270/918 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 LNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFN 402
            ||||:||:..:.....|....||.|.::.|:|..|.:|:|.||.||..|:|:             
 Frog    53 LNLSSNAIQIVTETDLKPYDQLQTLLLQYNAIHTINDGSFQPLGNLEELDLS------------- 104

  Fly   403 GLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEF 467
                      .|||| ::.|..|||.:.||.|:|..||.               :.||.:.:   
 Frog   105 ----------YNNLV-LLSSVWFRNLNKLKHLNLLGNQY---------------ITLGNDSL--- 140

  Fly   468 KNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLD 532
                |.:|:.|:.|:..:.....|....|:.|.||:.|.:...::...|.|:..:..:|      
 Frog   141 ----FASLSSLSSLQFGNQNFDAIQKQSFEGLERLNTLEINAAQLTLYEEGSLGRMKQI------ 195

  Fly   533 KNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVT 597
                         ..::|.:||:          .:|:.||.| :|.                 ||
 Frog   196 -------------YHTILRVNLT----------LLPALLKDL-VHS-----------------VT 219

  Fly   598 TLDASHNRITEIGAMSVPNSIELL-------FINNNIIGQIQANTFVDKTRLARVDL---YANVL 652
            .|:.:.   ||....:...:.|:|       ||..|.       |.||.:....|::   |.|:.
 Frog   220 LLEITD---TEFSTPADMQAFEVLAYTSVKQFIFRNC-------TIVDVSGYRFVEIIQTYRNIT 274

  Fly   653 SKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQR---------INNLTTRQHPHVVDLG 708
            ..:..|.               .|.|...:|..    |:|         |||:....:....||.
 Frog   275 DVVMKNC---------------RLLGRGLDCPN----LKRTTSSVTTIIINNIEVSLYYIFSDLS 320

  Fly   709 NIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQC------------ECEVICPG 761
            ::..::|                .|.....:..|.....|::.|.            :.:....|
 Frog   321 SLHQIIP----------------QFTYVTVTDSPVYLIPCQFSQSFTSLQYLDVSGGKLDNTYLG 369

  Fly   762 NCSCFHDATWA---TNIVDCGRQDLAALPNRIPQDVSDL-YLDG-----NNMPELEVGHLTGRRN 817
            :..|:|:...|   ...::..|..|.::| ::.|.:|.| ||..     |...||........:|
 Frog   370 SSVCYHEGGGACPKLQTLNVSRNLLTSVP-KVAQFLSGLNYLTNLDISQNKFSELSTSKCQWPKN 433

  Fly   818 LRALYLNASNLMTLQNGSLAQLV--NLRVLHLENNKLT--ALEGTEFRSLGLLRELYLHNNMLTH 878
            |:  |||.||   .|...:...:  .|::|.:.:|.||  |:|      :..|.|||:.||.|:.
 Frog   434 LK--YLNISN---NQINIITTCIPPTLQILDVSSNYLTVFAIE------MPNLTELYISNNRLSK 487

  Fly   879 ISNAT-FEPLVSLEVLRLDNNRL--SSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNA 940
            :.... |..||.|.:.|.|.|..  |.|.....|..|....   |.:.|.||.|    .|:..|.
 Frog   488 LPEGMYFTSLVLLSISRNDLNGFGQSDLELFSNRTILDARA---NNYKCSCQFL----DFIRSNT 545

  Fly   941 MVVRDAHDIY-CLDAGIKRELELIGNLANGPD--CSDLLDASASNISSSQDLAGGYRLPLLAAVL 1002
            .|:....|.| |......:::::  ..||.|.  |...|..:.|.|.            |:|.|.
 Frog   546 AVLVGWPDNYKCASPASVKDVQI--QDANLPPLVCHKTLIVTLSCIL------------LIALVA 596

  Fly  1003 VLIFLVVVLIIVFVFRESVRMWLFA-HYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAE 1066
            .::.|...|.:|: :.:....||.| ...::.|     |....:|..:.:||:|.|:|...:..:
 Frog   597 AIVALCHFLHVVW-YAKMTWAWLKAKRKPLKNC-----DREICFDGFVSYSERDSEWVENMMVPK 655

  Fly  1067 LEHGRPPFRLCIQQRDLPPQASHL-QLVEGARASRKIILVLTRNLLATEWNRIE-----FRNAFH 1125
            ||:.....:||:.:||..|....: .:::....|.|.:.||:.:.:.:||.:.|     ||    
 Frog   656 LENATLAMKLCLHKRDFVPGKWIIDNIIDAMEKSYKTVFVLSEHFVRSEWCKYELEFSHFR---- 716

  Fly  1126 ESLRGLAQKLVIIEETSVSAEAEDVAELSPYLK-SVPS-----NRLLTCDRY------------F 1172
                       :.:|.:.||   .:..|.|..| :||.     .:|:....|            |
 Frog   717 -----------LFDENNDSA---ILILLDPIEKETVPKRFCKLRKLMNTKTYLEWPTDEEQQEVF 767

  Fly  1173 WEKLRYAI 1180
            |:.|:.|:
 Frog   768 WDNLKTAL 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 58/253 (23%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380 7/19 (37%)
leucine-rich repeat 359..382 CDD:275380 10/22 (45%)
leucine-rich repeat 383..406 CDD:275380 3/22 (14%)
leucine-rich repeat 407..430 CDD:275380 8/22 (36%)
leucine-rich repeat 431..451 CDD:275380 6/19 (32%)
leucine-rich repeat 454..477 CDD:275380 4/22 (18%)
leucine-rich repeat 478..499 CDD:275380 4/20 (20%)
leucine-rich repeat 502..525 CDD:275380 4/22 (18%)
leucine-rich repeat 526..548 CDD:275380 1/21 (5%)
leucine-rich repeat 590..617 CDD:275380 5/26 (19%)
leucine-rich repeat 618..641 CDD:275380 8/29 (28%)
leucine-rich repeat 642..689 CDD:275380 7/49 (14%)
LRRCT 679..736 CDD:214507 10/65 (15%)
LRR <775..>920 CDD:443914 44/157 (28%)
leucine-rich repeat 775..796 CDD:275380 4/20 (20%)
leucine-rich repeat 797..817 CDD:275380 6/25 (24%)
leucine-rich repeat 818..841 CDD:275380 7/24 (29%)
leucine-rich repeat 842..865 CDD:275380 7/24 (29%)
leucine-rich repeat 866..889 CDD:275380 9/23 (39%)
leucine-rich repeat 890..911 CDD:275380 7/22 (32%)
TIR 1045..1183 CDD:214587 36/160 (23%)
LOC100485927XP_017946494.1 leucine-rich repeat 53..73 CDD:275378 7/19 (37%)
LRR_8 73..>117 CDD:404697 19/67 (28%)
leucine-rich repeat 74..97 CDD:275378 10/22 (45%)
leucine-rich repeat 98..112 CDD:275378 7/37 (19%)
leucine-rich repeat 122..146 CDD:275380 10/45 (22%)
leucine-rich repeat 147..170 CDD:275380 5/22 (23%)
leucine-rich repeat 171..192 CDD:275380 4/20 (20%)
LRR <342..>546 CDD:443914 57/222 (26%)
leucine-rich repeat 353..383 CDD:275380 4/29 (14%)
leucine-rich repeat 384..409 CDD:275378 6/25 (24%)
leucine-rich repeat 410..454 CDD:275378 12/48 (25%)
leucine-rich repeat 455..474 CDD:275378 7/24 (29%)
leucine-rich repeat 475..496 CDD:275378 8/20 (40%)
TIR 633..776 CDD:214587 36/161 (22%)
Blue background indicates that the domain is not in the aligned region.

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