DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 18w and tlr22

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_002942581.2 Gene:tlr22 / 100485706 XenbaseID:XB-GENE-5905045 Length:944 Species:Xenopus tropicalis


Alignment Length:1142 Identity:263/1142 - (23%)
Similarity:428/1142 - (37%) Gaps:318/1142 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWC 166
            |.:||..    |..|..:...|||.:    ||  ::...||.|..|..|:|.:|.|:.:..|.:.
 Frog    51 LTKVPAQ----LPELSFMLDLSHNII----KT--INRTDFQNLTVLQNLNLSNNRIQYMENGAFG 105

  Fly   167 SMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGA 231
            .:.:|||||||:|||.|     .|.:...|                                   
 Frog   106 KLVALQLLNLTKNRIGS-----LSSRTFEG----------------------------------- 130

  Fly   232 SRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLP--SEAF-AGNKELRELHLQGN 293
              |:.|.||.|.:|||.||.||....|.:|:.:::|||....|.  :.|| .|.  |||:::...
 Frog   131 --LQNLSTLLLDNNNIVTLEPNTFLHLYNLKTISLSYNCFYKLKTLNPAFQIGT--LREINIANC 191

  Fly   294 DLYEL-PKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELY 357
            .:... .:.:::....|..:|.|.|..:......|        |:.||:|               
 Frog   192 SIQTFSTEDIVNVSASLRSVDASRNPFSVISFPMS--------ILENLTN--------------- 233

  Fly   358 FLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVES 422
             |.|...:...:.:::|..|  |..|..||:.||.:..                  ..::.|:::
 Frog   234 -LDISLTQRPILWYVKEPCF--LRGLKKLNIKENNIKP------------------PAIIGIIKN 277

  Fly   423 QAFRNCSDLKELDLSSNQLTEVPEAVQDLSM----LKTLDLGENQISEFKNNTFRNLNQLTGLRL 483
               .:||.|:||:||...||:..:.:|:|.:    ::||.|..||.:||:.:||:|...      
 Frog   278 ---LSCSSLEELNLSYLNLTDSDQLIQELCLRHPKVQTLKLTGNQYTEFREDTFQNCTS------ 333

  Fly   484 IDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLAS 548
                              :.||:|:.||:.|.....|.....|..:.|..|.||.|...|:.:.|
 Frog   334 ------------------VKVLDLSHNRLHSAPGSTFHHLASIRELSLANNSLTAIPDNFSFITS 380

  Fly   549 LLWLNLSENHL--VWFDYAFIPSNLKWLDIHGNYI-----EALGNYYKLQEEIRVTTLDASHNRI 606
            |..||||.||:  |..:.:|  ||||.||:.||.:     ..||| :.||:      |:...|.:
 Frog   381 LQKLNLSYNHVKEVNLNNSF--SNLKELDLSGNKMTFFLSSGLGN-WNLQD------LNLRENYL 436

  Fly   607 TEIG---AMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKI------SLNALRV 662
            .:|.   |.|:| :::.|.|:.|.:..:..|||.:.|.|..::|..|.:..|      .|:.||.
 Frog   437 LDISASFASSLP-TLQRLTISKNKLSSLSTNTFQNVTFLKHLNLADNQIEVIDPGAFSGLDKLRT 500

  Fly   663 APVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLAS 727
            ..:.:.| :....|....|:...|:..||...|.......:.:|:            .|..||.|
 Frog   501 LIIGSNK-ITRNTLHNMTFQGLGSLLELQLFGNYLNYDSSNYLDI------------VPFLPLKS 552

  Fly   728 LSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQ 792
            |..  .....:.|                                                    
 Frog   553 LKM--ITLNSQGH---------------------------------------------------- 563

  Fly   793 DVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEG 857
                     |.|..|.:....|...|..::.....|.::.:.:.:....||.|.:..|.:..|:.
 Frog   564 ---------NGMQNLPINFFEGLLALERIHAGNLALSSIDSRTFSYTPQLRELDISENPIKILDP 619

  Fly   858 TEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSS--------LPHLQYRHSLQG 914
            ..||::..|.||::....:..:.......|..|::||..:::|:|        ||.|::      
 Frog   620 FLFRNVPHLTELHISKTRMESLDFLILSNLTHLKLLRAVDSQLNSFTSQQGAALPSLRF------ 678

  Fly   915 LTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLANGPDCSDLLDAS 979
            |.|..|..:|.|.....:....:|....|...::..|....:.|..:|                |
 Frog   679 LDLRNNPLTCICDNQWFIDWVHNDTKTQVLHFYEYTCAYPPVARNSKL----------------S 727

  Fly   980 ASNISSSQ-DLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMW-------LFAHYGVRVCEP 1036
            ..|:||.: |.:             .||.:...:.:..|..|..:|       ::|:|.......
 Frog   728 TFNLSSCRLDYS-------------FIFFLTSTLFITTFIISATVWNFWRWHVIYAYYITLAFLY 779

  Fly  1037 RFEDAGK----LYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRDLPP-QASHLQLVEGA 1096
            .....||    .|||.|.::..|.::|.|.:...|| ||..:|||:..||..| :|....:|:..
 Frog   780 NRRWQGKKQKCKYDAFISYNFHDEKWVFRQLVPNLE-GRYNWRLCLHHRDFEPGKAIVDNIVDSI 843

  Fly  1097 RASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSV--SAEAEDVAE--LSPY- 1156
            .:|||.|.:::|:.|.:||...|.:         ||...:..|.|.|  ....|.:.:  |||| 
 Frog   844 YSSRKTICIISRHYLESEWCSKEIQ---------LASFRLFEEHTDVLILLFLEQIPDHHLSPYH 899

  Fly  1157 -LKSV---------PSNRLLTCDRYFWEKLRYAIPIE 1183
             ::.|         |..|..|  ..||.::..|:..|
 Frog   900 QIRKVIKKKTYLIWPQERNAT--SIFWYRVSQALQTE 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 4/12 (33%)
LRR_8 115..181 CDD:290566 23/65 (35%)
leucine-rich repeat 116..146 CDD:275380 9/29 (31%)
leucine-rich repeat 147..170 CDD:275380 6/22 (27%)
leucine-rich repeat 171..201 CDD:275380 13/29 (45%)
LRR_RI 210..464 CDD:238064 59/261 (23%)
leucine-rich repeat 212..236 CDD:275380 1/23 (4%)
LRR_8 235..295 CDD:290566 23/62 (37%)
leucine-rich repeat 237..260 CDD:275380 12/22 (55%)
leucine-rich repeat 261..284 CDD:275380 8/25 (32%)
LRR_8 283..345 CDD:290566 12/62 (19%)
leucine-rich repeat 285..308 CDD:275380 3/23 (13%)
leucine-rich repeat 309..334 CDD:275380 5/24 (21%)
LRR_8 334..393 CDD:290566 14/58 (24%)
leucine-rich repeat 335..358 CDD:275380 4/22 (18%)
leucine-rich repeat 359..382 CDD:275380 5/22 (23%)
LRR_8 382..441 CDD:290566 13/58 (22%)
leucine-rich repeat 383..406 CDD:275380 5/22 (23%)
leucine-rich repeat 407..430 CDD:275380 2/22 (9%)
LRR_8 431..488 CDD:290566 19/60 (32%)
leucine-rich repeat 431..451 CDD:275380 8/19 (42%)
leucine-rich repeat 454..477 CDD:275380 10/22 (45%)
LRR_8 477..559 CDD:290566 21/81 (26%)
leucine-rich repeat 478..499 CDD:275380 0/20 (0%)
leucine-rich repeat 502..525 CDD:275380 7/22 (32%)
leucine-rich repeat 526..548 CDD:275380 7/21 (33%)
leucine-rich repeat 590..617 CDD:275380 8/29 (28%)
leucine-rich repeat 618..641 CDD:275380 6/22 (27%)
leucine-rich repeat 642..689 CDD:275380 11/52 (21%)
LRRCT 679..736 CDD:214507 11/56 (20%)
leucine-rich repeat 775..796 CDD:275380 0/20 (0%)
LRR_8 797..852 CDD:290566 10/54 (19%)
leucine-rich repeat 797..817 CDD:275380 4/19 (21%)
leucine-rich repeat 818..841 CDD:275380 2/22 (9%)
LRR_8 841..900 CDD:290566 14/58 (24%)
leucine-rich repeat 842..865 CDD:275380 7/22 (32%)
LRR_4 866..907 CDD:289563 11/48 (23%)
leucine-rich repeat 866..889 CDD:275380 4/22 (18%)
leucine-rich repeat 890..911 CDD:275380 8/28 (29%)
TIR 1045..1183 CDD:214587 45/153 (29%)
tlr22XP_002942581.2 leucine-rich repeat 43..60 CDD:275380 4/12 (33%)
LRR_8 <64..96 CDD:404697 12/37 (32%)
leucine-rich repeat 64..85 CDD:275380 8/26 (31%)
LRR_8 86..144 CDD:404697 25/99 (25%)
leucine-rich repeat 86..109 CDD:275380 6/22 (27%)
leucine-rich repeat 110..133 CDD:275380 14/64 (22%)
LRR_8 132..193 CDD:404697 23/62 (37%)
leucine-rich repeat 134..157 CDD:275380 12/22 (55%)
leucine-rich repeat 158..233 CDD:275380 19/84 (23%)
leucine-rich repeat 183..195 CDD:275378 3/11 (27%)
internalin_A 207..>573 CDD:380193 115/522 (22%)
leucine-rich repeat 256..282 CDD:275378 7/46 (15%)
leucine-rich repeat 283..309 CDD:275380 9/25 (36%)
leucine-rich repeat 310..333 CDD:275380 10/22 (45%)
leucine-rich repeat 334..357 CDD:275380 7/22 (32%)
leucine-rich repeat 358..380 CDD:275380 7/21 (33%)
leucine-rich repeat 381..402 CDD:275380 9/22 (41%)
leucine-rich repeat 403..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 8/29 (28%)
leucine-rich repeat 450..473 CDD:275380 6/22 (27%)
leucine-rich repeat 474..497 CDD:275380 5/22 (23%)
leucine-rich repeat 498..523 CDD:275380 5/25 (20%)
leucine-rich repeat 553..579 CDD:275380 6/88 (7%)
PPP1R42 <571..687 CDD:411060 25/121 (21%)
leucine-rich repeat 580..603 CDD:275380 2/22 (9%)
leucine-rich repeat 604..627 CDD:275380 7/22 (32%)
leucine-rich repeat 628..651 CDD:275380 4/22 (18%)
leucine-rich repeat 652..675 CDD:275380 6/22 (27%)
TPKR_C2 684..>722 CDD:417692 6/37 (16%)
TIR 791..927 CDD:214587 44/147 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 195 1.000 Inparanoid score I3710
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14092
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.060

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