DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100485358

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_002943096.1 Gene:LOC100485358 / 100485358 XenbaseID:XB-GENE-29077783 Length:837 Species:Xenopus tropicalis


Alignment Length:1089 Identity:232/1089 - (21%)
Similarity:386/1089 - (35%) Gaps:368/1089 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 IRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSN--ANGAVSGGSELQTLDVSF 219
            :|:|    ||..|.|    :.::|    .|:.     |:|..|..  .|.:|:    |:.||:||
 Frog    21 VREL----WCQTPCL----VDESR----RFVS-----CSGRNLVEIPKNFSVT----LEELDMSF 64

  Fly   220 NELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKE 284
                                     |.|..:..:..:..::||.||:|||.:.::.:.:|..|.:
 Frog    65 -------------------------NRIFQIKSDDFSAYTNLRALNLSYNQIATIENGSFNSNTQ 104

  Fly   285 LRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIG 349
            ||.|.|..|.|.|:|..||..|..|..||:|.|     ..:.||...:                 
 Frog   105 LRSLTLFNNSLTEMPSALLEPLHLLEFLDMSNN-----FYNKSTLGDV----------------- 147

  Fly   350 SKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNN 414
               |:.|..||.|.:....:..:::..|:|:.|:.....|              |..::.|||  
 Frog   148 ---FQTLVNLQTLSIGGPLVSKVQKDDFVPIRNIGLQKFA--------------LKTMSSLTL-- 193

  Fly   415 NLVSIVESQAFRNCSDLK------ELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFR 473
                 .|..||   |.|.      ::.|.:|     |:|:  |.:||.|. |::    |....||
 Frog   194 -----YEEGAF---SVLNTHVLWFDIALDTN-----PQAL--LLILKDLK-GKS----FDVLRFR 238

  Fly   474 NLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTD 538
            ||.::|        ....||.:|..||.:|...|.      ..||.|::|               
 Frog   239 NLFEIT--------YYTDTVDIFSWLPSISTRELV------FYRGKFNEN--------------- 274

  Fly   539 INGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASH 603
                      |||:.| ||                                           ...
 Frog   275 ----------LLWIML-EN-------------------------------------------IQR 285

  Fly   604 NRITEIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAE 668
            :.|.::..:||               ....:...:||.::..||        .|..|||..|:  
 Frog   286 SSILDLSLLSV---------------DFSRSHSANKTNVSIDDL--------RLRTLRVKDVT-- 325

  Fly   669 KPVPEFYLGGNP--FECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLASLSAS 731
                      ||  ...|.:..|.::|:||....    |:..::.| ...|..:.|..| .:|..
 Frog   326 ----------NPDILRFDWTFTWFRKISNLYIIN----VNFNSVPC-DAWSEMSNLEKL-DMSTD 374

  Fly   732 DFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSD 796
            :.|..|..:  |.|                                   ||: |||      .:|
 Frog   375 ELVDTYLYN--PWC-----------------------------------QDV-ALP------TTD 395

  Fly   797 LY-LDGNNMPELEVGHLTGRR-------NLRALYLNASNLMTLQNGSLAQLV------------- 840
            .: |..||:..|.:..|...:       :||:..|.:::.|.....|:..::             
 Frog   396 TFILAYNNLQSLRMLSLLTAKWPKLATLDLRSNSLGSNDEMCTWTPSIRTVILKDNMLKVGVFQC 460

  Fly   841 ---NLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNN---- 898
               .:..|.|.:::|..|:...|.....|::|.|.:|.:..||:....|  :|:||.|::|    
 Frog   461 LPTTVEFLDLSHSQLEQLDMDYFNKATNLKQLILSHNKIKFISSEWKSP--NLQVLALEDNSFGV 523

  Fly   899 ----RLSSLPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIY-CLDAGIKR 958
                ....||      .|:.||.|.|.:.|.|...|..:|...:..:|:.|....| |...    
 Frog   524 INVGSFKDLP------KLRNLTAGDNPYGCTCDLYRFFSQIREEGRIVLADWPQAYKCYSP---- 578

  Fly   959 ELELIGNLANGPDCSDLLDASASNISSSQ---DLAGGYRLPLLAAVLV-LIFLVVVLIIVFVFRE 1019
                          .||||......:..:   |:.      |:.|:.| ...:||:|.::..:|.
 Frog   579 --------------PDLLDTKVEFYNPGKVQCDVR------LVVAISVSTTAVVVILSMLLCWRF 623

  Fly  1020 SVRMWLFAHYGVRVCEPRFEDAGK----LYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQ 1080
            .|..::...:.:...:.|..:.|.    ||.|.|.:|..|.::|...:..:||...||:|:||.:
 Frog   624 DVLWYVQTMFAIVQSKYRSRNMGNTKEYLYHAFISYSHSDADWVRGELLHQLESCSPPYRVCIHE 688

  Fly  1081 RD-LPPQASHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSVS 1144
            || ||.:.....::|....|||||.||:||.:.:||...|...|...::....:.::::.:..|:
 Frog   689 RDFLPGRWIIDNIIENIENSRKIIFVLSRNFVNSEWCNYELYFAHQRAVGHALEDVILVVKEKVT 753

  Fly  1145 AEAEDVAELSPYLKSVPSNRLL-------TCDRYFWEKLRYAIPIELSP 1186
              .||:.:....|:.:...:..       |...:||.:||..:....||
 Frog   754 --MEDLPKRFQKLRKLLRTKTYLEWPLEHTRQHFFWIQLRSILGKVSSP 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697 6/23 (26%)
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380 4/12 (33%)
leucine-rich repeat 171..201 CDD:275380 6/29 (21%)
LRR 210..592 CDD:443914 84/387 (22%)
leucine-rich repeat 212..236 CDD:275380 5/23 (22%)
leucine-rich repeat 237..260 CDD:275380 2/22 (9%)
leucine-rich repeat 261..284 CDD:275380 9/22 (41%)
leucine-rich repeat 285..308 CDD:275380 11/22 (50%)
leucine-rich repeat 309..334 CDD:275380 7/24 (29%)
leucine-rich repeat 335..358 CDD:275380 2/22 (9%)
leucine-rich repeat 359..382 CDD:275380 5/22 (23%)
leucine-rich repeat 383..406 CDD:275380 2/22 (9%)
leucine-rich repeat 407..430 CDD:275380 6/22 (27%)
leucine-rich repeat 431..451 CDD:275380 5/25 (20%)
leucine-rich repeat 454..477 CDD:275380 9/22 (41%)
leucine-rich repeat 478..499 CDD:275380 4/20 (20%)
leucine-rich repeat 502..525 CDD:275380 6/22 (27%)
leucine-rich repeat 526..548 CDD:275380 0/21 (0%)
leucine-rich repeat 590..617 CDD:275380 3/26 (12%)
leucine-rich repeat 618..641 CDD:275380 1/22 (5%)
leucine-rich repeat 642..689 CDD:275380 10/48 (21%)
LRRCT 679..736 CDD:214507 14/58 (24%)
LRR <775..>920 CDD:443914 39/176 (22%)
leucine-rich repeat 775..796 CDD:275380 5/20 (25%)
leucine-rich repeat 797..817 CDD:275380 5/27 (19%)
leucine-rich repeat 818..841 CDD:275380 5/38 (13%)
leucine-rich repeat 842..865 CDD:275380 5/22 (23%)
leucine-rich repeat 866..889 CDD:275380 7/22 (32%)
leucine-rich repeat 890..911 CDD:275380 7/28 (25%)
TIR 1045..1183 CDD:214587 40/145 (28%)
LOC100485358XP_002943096.1 LRR <37..>161 CDD:443914 45/182 (25%)
leucine-rich repeat 39..55 CDD:275380 4/20 (20%)
leucine-rich repeat 57..80 CDD:275378 7/47 (15%)
leucine-rich repeat 81..104 CDD:275378 9/22 (41%)
leucine-rich repeat 105..128 CDD:275378 11/22 (50%)
leucine-rich repeat 129..153 CDD:275378 9/48 (19%)
LRR 213..>543 CDD:443914 100/517 (19%)
leucine-rich repeat 345..365 CDD:275380 4/24 (17%)
leucine-rich repeat 366..419 CDD:275380 18/97 (19%)
leucine-rich repeat 420..442 CDD:275380 4/21 (19%)
leucine-rich repeat 443..464 CDD:275378 0/20 (0%)
leucine-rich repeat 465..488 CDD:275378 5/22 (23%)
leucine-rich repeat 489..510 CDD:275378 7/22 (32%)
leucine-rich repeat 511..534 CDD:275378 7/28 (25%)
PCC 516..>581 CDD:188093 17/88 (19%)
TIR 653..791 CDD:214587 38/139 (27%)
Blue background indicates that the domain is not in the aligned region.

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