DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100485206

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_002931661.1 Gene:LOC100485206 / 100485206 XenbaseID:XB-GENE-29077679 Length:790 Species:Xenopus tropicalis


Alignment Length:619 Identity:132/619 - (21%)
Similarity:205/619 - (33%) Gaps:270/619 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SELAPGLFRQL--------QKLSE-LRIDAC-----KLQRVP--PNAFEGLMSLKRLTLESHNAV 127
            ||.:....|||        :||.| |..:||     ||..:|  |:|...:..|:.|.||..|.:
 Frog   379 SETSENRLRQLNLNKEWNAEKLREKLETNACNLLELKLHMIPGLPDAVFEITELQSLRLEKMNNI 443

  Fly   128 WGPG---------------KTLELHGQSFQGLKE-LSELHLGDNNIRQLPEGVWC-SMPSLQLLN 175
            ..|.               .|::||..:|..|.| |..|.:..:||:|:|  :|. .:..|:.|:
 Frog   444 MIPATIAQLNNLHALFLLQSTIKLHTAAFAFLMEHLQTLTVKFDNIQQIP--LWIYGLSCLEELH 506

  Fly   176 LTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDV-------SFNELRSLPDAWGASR 233
            |                :|:                 |:.||       ||..|.:|...:..|:
 Frog   507 L----------------ICS-----------------QSPDVAKNITFESFKNLNNLKHLFIKSQ 538

  Fly   234 LR-----------RLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRE 287
            |.           :||..|:.:..|..:.||:|..:.:|.||.:...:|..:|:..|: .:.|:|
 Frog   539 LSGIPQNVTDISLQLQRFSIHNEGIKLVIPNSLKKMVNLTVLELIQCNLGHVPNSIFS-LRALKE 602

  Fly   288 LHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKT 352
            |:|:||:        |..:::|                 ::|..|..|.:|.|.:|.:.:|..  
 Frog   603 LNLEGNN--------LRSIQEL-----------------ASFQHLHNLTILKLWHNKIAKIPD-- 640

  Fly   353 FKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLV 417
                              ||.:     |.||..|||:.|.:..:.:.:|                
 Frog   641 ------------------HINK-----LTNLEQLNLSHNNIREIPHSLF---------------- 666

  Fly   418 SIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLR 482
                     .||.|:.||||.|.:..:...:..|..||...:..|::....|..|.         
 Frog   667 ---------LCSKLRYLDLSYNDICIIQPYIWMLQSLKYFSIKCNKVEIIPNELFL--------- 713

  Fly   483 LIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLA 547
                            ..||..|||.||::..                                 
 Frog   714 ----------------CRRLETLNLGKNKLHC--------------------------------- 729

  Fly   548 SLLWLNLSENHLVWFDYAFIPSNLKW---LDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEI 609
                  ||.|          ..||::   |||.||.|.||.                     .|:
 Frog   730 ------LSPN----------IGNLEFLSHLDIKGNCIRALP---------------------PEL 757

  Fly   610 GAMSVPNSIELLFINNNIIG---------QIQAN 634
            |.....|..||: |.:|::|         |||.|
 Frog   758 GCCKSLNKNELI-IEDNMMGCWHSLLLNKQIQNN 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 5/19 (26%)
leucine-rich repeat 92..115 CDD:275380 10/30 (33%)
LRR_8 115..181 CDD:404697 22/82 (27%)
leucine-rich repeat 116..146 CDD:275380 11/44 (25%)
leucine-rich repeat 147..170 CDD:275380 7/23 (30%)
leucine-rich repeat 171..201 CDD:275380 4/29 (14%)
LRR 210..592 CDD:443914 81/402 (20%)
leucine-rich repeat 212..236 CDD:275380 9/41 (22%)
leucine-rich repeat 237..260 CDD:275380 7/22 (32%)
leucine-rich repeat 261..284 CDD:275380 6/22 (27%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 3/24 (13%)
leucine-rich repeat 335..358 CDD:275380 5/22 (23%)
leucine-rich repeat 359..382 CDD:275380 3/22 (14%)
leucine-rich repeat 383..406 CDD:275380 6/22 (27%)
leucine-rich repeat 407..430 CDD:275380 1/22 (5%)
leucine-rich repeat 431..451 CDD:275380 6/19 (32%)
leucine-rich repeat 454..477 CDD:275380 5/22 (23%)
leucine-rich repeat 478..499 CDD:275380 0/20 (0%)
leucine-rich repeat 502..525 CDD:275380 6/22 (27%)
leucine-rich repeat 526..548 CDD:275380 0/21 (0%)
leucine-rich repeat 590..617 CDD:275380 2/26 (8%)
leucine-rich repeat 618..641 CDD:275380 9/26 (35%)
leucine-rich repeat 642..689 CDD:275380
LRRCT 679..736 CDD:214507
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
LOC100485206XP_002931661.1 Pannexin_like 1..324 CDD:463622
leucine-rich repeat 411..431 CDD:275380 5/19 (26%)
leucine-rich repeat 432..454 CDD:275380 6/21 (29%)
leucine-rich repeat 479..501 CDD:275380 7/23 (30%)
leucine-rich repeat 502..529 CDD:275380 10/59 (17%)
leucine-rich repeat 530..552 CDD:275380 3/21 (14%)
LRR 548..>758 CDD:443914 73/380 (19%)
leucine-rich repeat 553..576 CDD:275380 7/22 (32%)
leucine-rich repeat 577..599 CDD:275380 6/22 (27%)
leucine-rich repeat 600..624 CDD:275380 10/48 (21%)
leucine-rich repeat 625..647 CDD:275380 8/46 (17%)
leucine-rich repeat 648..670 CDD:275380 7/46 (15%)
leucine-rich repeat 694..716 CDD:275380 5/46 (11%)
leucine-rich repeat 717..739 CDD:275380 11/70 (16%)
Blue background indicates that the domain is not in the aligned region.

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