DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and si:cabz01090165.1

DIOPT Version :10

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0287775 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_073784879.1 Gene:si:cabz01090165.1 / 100333421 ZFINID:ZDB-GENE-161017-71 Length:659 Species:Danio rerio


Alignment Length:287 Identity:80/287 - (27%)
Similarity:131/287 - (45%) Gaps:63/287 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 NLNQLTG-LRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLT 537
            |:::.|. |||:||.|.::....|.::..|..|.|::|.|..|...||....::.|:.||.|.||
Zfish    71 NIDRQTAELRLMDNFITSLRHRDFANMSSLIHLTLSRNTISQIRPYAFADLQDLHALHLDANRLT 135

  Fly   538 DINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEAL--GNYYKLQEEIRVTTLD 600
                           .|.:.||...      .||:.|.:..|.|.::  |.:....|.:.  .||
Zfish   136 ---------------VLDDTHLQGL------VNLRHLILANNQIHSISEGAFQDFLETLE--DLD 177

  Fly   601 ASHNRITEI--GAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNA--LR 661
            .|:|.:.::  ..:::..|:..|.:::|:|..:....|.:..:|||:|:.:|.|.||..:.  ||
Zfish   178 LSYNNLVDLPWDTIAMLASVNTLSLDHNLIEFVPEGIFSNLHKLARLDMTSNKLKKIPPDPLFLR 242

  Fly   662 VAPVSAE---KPVPEFYL--GGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAP 721
            : ||.|:   .|:....|  ||||..|:|.:.||:|:    ||:.    ||..  |..|      
Zfish   243 I-PVYAKMKGSPLTALVLSFGGNPLHCNCELVWLRRL----TRED----DLET--CASP------ 290

  Fly   722 LRPLA-----SLSASDFVCKYESHCPP 743
             |.||     ::...:|||:     ||
Zfish   291 -RELAGKYFWTIREEEFVCE-----PP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:404697
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR 210..592 CDD:443914 32/120 (27%)
leucine-rich repeat 212..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..358 CDD:275380
leucine-rich repeat 359..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..430 CDD:275380
leucine-rich repeat 431..451 CDD:275380
leucine-rich repeat 454..477 CDD:275380 1/2 (50%)
leucine-rich repeat 478..499 CDD:275380 8/21 (38%)
leucine-rich repeat 502..525 CDD:275380 8/22 (36%)
leucine-rich repeat 526..548 CDD:275380 6/21 (29%)
leucine-rich repeat 590..617 CDD:275380 5/28 (18%)
leucine-rich repeat 618..641 CDD:275380 4/22 (18%)
leucine-rich repeat 642..689 CDD:275380 21/53 (40%)
LRRCT 679..736 CDD:214507 18/61 (30%)
LRR <775..>920 CDD:443914
leucine-rich repeat 775..796 CDD:275380
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
leucine-rich repeat 842..865 CDD:275380
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
si:cabz01090165.1XP_073784879.1 None
Blue background indicates that the domain is not in the aligned region.

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