DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and LOC100332583

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_002665954.4 Gene:LOC100332583 / 100332583 -ID:- Length:1019 Species:Danio rerio


Alignment Length:1236 Identity:277/1236 - (22%)
Similarity:437/1236 - (35%) Gaps:395/1236 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSF----QGLKELSELHL 152
            ||||.:                .:||....:.|..|......:...|:..    |.|...:.:.|
Zfish    19 LSELNV----------------RTLKTQPCDIHENVTAETVVVNCQGRKLKVLPQFLANTTYIDL 67

  Fly   153 GDNNIRQLPEGVWCSMPSLQLLN---LTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQT 214
            .:|.||.|....:..:.:|.|||   |.|||          |.:.|....||.       ::||.
Zfish    68 SENYIRNLTLQSFHGLENLTLLNLKWLNQNR----------EVVIAKGVFSNL-------TKLQV 115

  Fly   215 LDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYN---------- 269
            ||::..:|:.:|    ....:.|:.|.|:.|.|:.:.......:.:|..|.:|.|          
Zfish   116 LDLNGIKLKYIP----KDIPKNLKELGLEENKITWINLTTFEHVKNLSFLYLSKNCYYWNPCSRR 176

  Fly   270 HLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIR 334
            :.:...|.::..|  |:.|.|..|:|.::|.||...||:   |:|..|.||  ::....|.||..
Zfish   177 YRIEKGSLSYLVN--LKRLTLSFNNLTQVPIGLPVSLER---LELGSNSLT--YIGEHDFRGLCN 234

  Fly   335 LIVLNLS----------------NNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNL 383
            |.||.:.                .|....|..:.|.:|..|.||.:..|||..|....|..|.||
Zfish   235 LTVLKIQGNCPRCHTAPYPCIPCKNTSIEIHPQAFSDLKNLHILHLAGNSIKSINPAWFANLSNL 299

  Fly   384 HTLNLAENRLHT-----LDNRIFNGLYVLTKLTLNNNL------VSIVESQAFRNCSDLKELDLS 437
            ..|.|:.|.|.:     .|......|.:||||.|:.|.      :::|.|..|.|.:.||.|.|.
Zfish   300 QQLFLSFNLLFSAITDPADTVFLGNLPLLTKLDLSYNFALKTYPLTVVLSPGFANLTSLKTLHLR 364

  Fly   438 SNQLTEVP----EAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITV----- 493
            .....|:.    :::.||..|..||:|.|.|....:..|:::..   |.|.:||:..:||     
Zfish   365 GLVFREIQKDTFKSLFDLQHLNVLDVGINFIVRATSYIFQHVRV---LYLAENRLYPVTVNGELS 426

  Fly   494 ---GMFQD----LPRLS----------------------VLNLAKNRIQSIERGAFDKNTEIEAI 529
               |...:    :|.:|                      ||:|::|.:..|....||....|..:
Zfish   427 KATGAGSNHRSIMPLMSEPLYPFDAPKNLVKLECYNTGRVLDLSRNNLFLISPEQFDTYGNISCL 491

  Fly   530 RLDKN-FLTDINGI-FATLASLLWLNLSENHL-VWFDYAFIP-SNLKWLDI--HGNYIEALG--- 585
            .|.:| |.|..||. |.:|.:|.:|:||.|.: :.:|.||.. .:|:.|||  :.:|....|   
Zfish   492 NLSRNGFSTAPNGSEFTSLPNLKYLDLSFNKVDLAYDNAFRELQSLEVLDISYNSHYFTVAGVTH 556

  Fly   586 NYYKLQEEIRVTTLDASHNRITEIGAMSVPN-SIELLFINNNIIGQI---QANTFV----DKTRL 642
            |...||....:..|:.|.|.|..:...::.: |:..|....|.:|::   :.||:|    :.|.|
Zfish   557 NMMFLQYLPSLKVLNMSFNSINTLTTKTMSSKSLRELQFRGNKLGRMWRDKDNTYVKIFKNFTNL 621

  Fly   643 ARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDL 707
            ..:|:..|.:.||........|::.::                    ||..:|          .|
Zfish   622 THLDISNNSIGKIPYTVYTQLPITIQR--------------------LQMSHN----------QL 656

  Fly   708 GNIECLMPHSRSAPLRPLASLSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWA 772
            .||...|       ||...:|.                          |:|       .||    
Zfish   657 ANINWTM-------LRRFQNLR--------------------------ELI-------LHD---- 677

  Fly   773 TNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLA 837
                           |.|.:..|:|.:|   :|.||:           |.|..:.:..|..|.|.
Zfish   678 ---------------NNIIEIASNLSVD---VPSLEL-----------LNLQRNRISKLAIGFLQ 713

  Fly   838 QLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSS 902
            .:|||:.|.|..|.|..:..:.|.:...|:.|:||.                             
Zfish   714 GVVNLKELDLSYNYLITVNQSTFPTESDLKMLWLHG----------------------------- 749

  Fly   903 LPHLQYRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLA 967
                             |.:.|.|    .|.:||            ::.||..:|     |..|.
Zfish   750 -----------------NPFHCTC----NLLEFV------------LWILDTNVK-----IPRLV 776

  Fly   968 NGPDCS-------------DLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRE 1019
            .|..|:             |:.:.....::                 .|..|:....||...| .
Zfish   777 TGVTCTMPEERKGLAVIKFDIQECIDDQLA-----------------FVAYFISAACIICTTF-A 823

  Fly  1020 SVRMWLF---AHYGVRVCEPRFEDAGKL------YDAIILHSEKD---YEFVCRNIAAELEHGRP 1072
            ::.|.||   ..|.....:.||....:|      |||.|.:..||   .::|..::..:||....
Zfish   824 AITMHLFYWDVSYLYYYLKARFTGYQQLSSESCIYDAFITYDTKDPQVSDWVLNHLRVQLEERSE 888

  Fly  1073 PF-RLCIQQRDLPPQASHL-QLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKL 1135
            .| .:|:::||..|.:..| .|.:..:.|||.:.|||...:    |...|:.|            
Zfish   889 LFLPICLEERDWIPGSPVLDSLTQSIQNSRKTVFVLTEGYV----NSGSFKLA------------ 937

  Fly  1136 VIIEETSVSAEAEDVAE---LSPYLKSVPSNRL---------------LTCDRYFWEKLRYAIPI 1182
            |.:....:..|.|||..   |.|.|:.....||               .:.:.:||:.||.||.:
Zfish   938 VFLAHQRLLEENEDVIVLLLLEPVLQYSHFVRLRRRLCARSILEWPHSSSAEAWFWQSLRNAIRV 1002

  Fly  1183 E 1183
            :
Zfish  1003 D 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380 4/22 (18%)
LRR_8 115..181 CDD:290566 19/72 (26%)
leucine-rich repeat 116..146 CDD:275380 7/33 (21%)
leucine-rich repeat 147..170 CDD:275380 5/22 (23%)
leucine-rich repeat 171..201 CDD:275380 10/32 (31%)
LRR_RI 210..464 CDD:238064 81/294 (28%)
leucine-rich repeat 212..236 CDD:275380 6/23 (26%)
LRR_8 235..295 CDD:290566 15/69 (22%)
leucine-rich repeat 237..260 CDD:275380 5/22 (23%)
leucine-rich repeat 261..284 CDD:275380 6/32 (19%)
LRR_8 283..345 CDD:290566 22/77 (29%)
leucine-rich repeat 285..308 CDD:275380 9/22 (41%)
leucine-rich repeat 309..334 CDD:275380 8/24 (33%)
LRR_8 334..393 CDD:290566 21/74 (28%)
leucine-rich repeat 335..358 CDD:275380 7/38 (18%)
leucine-rich repeat 359..382 CDD:275380 9/22 (41%)
LRR_8 382..441 CDD:290566 22/69 (32%)
leucine-rich repeat 383..406 CDD:275380 7/27 (26%)
leucine-rich repeat 407..430 CDD:275380 10/28 (36%)
LRR_8 431..488 CDD:290566 17/60 (28%)
leucine-rich repeat 431..451 CDD:275380 5/23 (22%)
leucine-rich repeat 454..477 CDD:275380 7/22 (32%)
LRR_8 477..559 CDD:290566 30/117 (26%)
leucine-rich repeat 478..499 CDD:275380 7/32 (22%)
leucine-rich repeat 502..525 CDD:275380 8/44 (18%)
leucine-rich repeat 526..548 CDD:275380 9/23 (39%)
leucine-rich repeat 590..617 CDD:275380 6/27 (22%)
leucine-rich repeat 618..641 CDD:275380 6/29 (21%)
leucine-rich repeat 642..689 CDD:275380 6/46 (13%)
LRRCT 679..736 CDD:214507 10/56 (18%)
leucine-rich repeat 775..796 CDD:275380 2/20 (10%)
LRR_8 797..852 CDD:290566 16/54 (30%)
leucine-rich repeat 797..817 CDD:275380 5/19 (26%)
leucine-rich repeat 818..841 CDD:275380 5/22 (23%)
LRR_8 841..900 CDD:290566 11/58 (19%)
leucine-rich repeat 842..865 CDD:275380 6/22 (27%)
LRR_4 866..907 CDD:289563 4/40 (10%)
leucine-rich repeat 866..889 CDD:275380 4/22 (18%)
leucine-rich repeat 890..911 CDD:275380 0/20 (0%)
TIR 1045..1183 CDD:214587 41/160 (26%)
LOC100332583XP_002665954.4 LRR_RI 27..226 CDD:238064 56/226 (25%)
LRR_8 61..120 CDD:290566 21/75 (28%)
leucine-rich repeat 62..85 CDD:275380 5/22 (23%)
leucine-rich repeat 86..112 CDD:275380 12/42 (29%)
leucine-rich repeat 113..133 CDD:275380 6/23 (26%)
LRR_8 132..200 CDD:290566 15/69 (22%)
leucine-rich repeat 134..157 CDD:275380 5/22 (23%)
leucine-rich repeat 158..189 CDD:275380 5/30 (17%)
leucine-rich repeat 190..210 CDD:275380 8/19 (42%)
LRR 192..587 CDD:227223 111/402 (28%)
leucine-rich repeat 211..234 CDD:275380 10/27 (37%)
leucine-rich repeat 235..274 CDD:275380 7/38 (18%)
leucine-rich repeat 275..296 CDD:275380 8/20 (40%)
leucine-rich repeat 299..327 CDD:275380 7/27 (26%)
leucine-rich repeat 328..355 CDD:275380 9/26 (35%)
leucine-rich repeat 358..457 CDD:275380 23/101 (23%)
leucine-rich repeat 385..405 CDD:275378 7/19 (37%)
leucine-rich repeat 465..487 CDD:275380 7/21 (33%)
LRR_RI <487..728 CDD:238064 77/343 (22%)
leucine-rich repeat 491..512 CDD:275380 8/20 (40%)
leucine-rich repeat 513..536 CDD:275380 8/22 (36%)
leucine-rich repeat 537..566 CDD:275380 9/28 (32%)
leucine-rich repeat 567..589 CDD:275380 4/21 (19%)
leucine-rich repeat 590..620 CDD:275380 6/29 (21%)
leucine-rich repeat 621..645 CDD:275380 6/23 (26%)
leucine-rich repeat 646..669 CDD:275380 9/59 (15%)
LRR_8 647..704 CDD:290566 24/159 (15%)
leucine-rich repeat 670..693 CDD:275380 10/77 (13%)
LRR_8 692..752 CDD:290566 21/116 (18%)
leucine-rich repeat 694..717 CDD:275380 7/33 (21%)
leucine-rich repeat 718..736 CDD:275380 5/17 (29%)
TPKR_C2 750..>789 CDD:301599 13/59 (22%)
TIR 858..1000 CDD:214587 39/157 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6339
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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