DRSC/TRiP Functional Genomics Resources

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Protein Alignment 18w and tlr20.4

DIOPT Version :9

Sequence 1:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster
Sequence 2:XP_009303038.2 Gene:tlr20.4 / 100005571 ZFINID:ZDB-GENE-071002-1 Length:951 Species:Danio rerio


Alignment Length:1269 Identity:253/1269 - (19%)
Similarity:441/1269 - (34%) Gaps:439/1269 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAVAACLLLLVADAHAQQQCNWQYGLTTMDIRC----SVRALESGTGTPLDLQVAEAAGRLDLQC 71
            :.:.|.|||.:.....   |:|..|      :|    .|:.....|..|.::..|:.....|:: 
Zfish     9 VLLFALLLLFLKTYFV---CSWLAG------KCFVYGDVKEFPLTTYCPGNINGADCKHVTDIK- 63

  Fly    72 SQELLHASELAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLEL 136
                    |...||...||.:. :::|......:.||:|....|||:||:        .|...::
Zfish    64 --------EDLRGLPSSLQSVC-IQMDGGSDGVLAPNSFSSFASLKQLTI--------AGCFSQI 111

  Fly   137 HGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSN 201
            ..::|.||..::.|.:..:|                                 |||.|       
Zfish   112 PPEAFNGLTNVTSLSISSSN---------------------------------SEKCC------- 136

  Fly   202 ANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNA---LAGLSSLRV 263
                          :|:.:          .|||..|..|.:.:.::|....|.   :..|..|.:
Zfish   137 --------------EVALD----------FSRLPSLTRLFISYYDLSLFKLNVFDKIPHLEELHL 177

  Fly   264 LNISYNHLVSLPSEA---FAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVD 325
            .|:..|::    ||.   .|..|.|::.:|.         |:||:|:               |.:
Zfish   178 GNVCLNNI----SEVLCRLANVKSLKQFNLD---------GVLHKLQ---------------HSN 214

  Fly   326 NSTFAGLIRLIVLNLS--------NNALTRI------GSKTFKELYFLQILDMRNNSIGH---IE 373
            .|.|.      ..|:|        |..||::      ..|||.:|:|.|..      :.|   :.
Zfish   215 CSVFN------TSNISTEFNIEKVNLTLTKVEHVDEGALKTFGKLFFFQFF------VSHTDFLR 267

  Fly   374 EGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLV--SIVESQAFRNCSDLKELDL 436
            :.:.:.::.:.||:...:.|:..|..:...||.:.::.::..::  |:..:.....|..:..:.|
Zfish   268 DLSLIGVHKIRTLDFKVDVLNVDDLCVAAKLYSVERMFVSYEMINLSVTPTNMSDGCEYIMSIAL 332

  Fly   437 SSN------QLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNL--------NQLTGLRLIDNR 487
            |::      .|.:|....|..|.|.|:.:   |....::|.|.:|        .||:.:.|.:||
Zfish   333 SNDISVKIVDLLDVYSLFQIFSNLTTVTI---QYHILRSNDFLSLCASFPQAVKQLSVMILKNNR 394

  Fly   488 IGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLLW 551
            |..|....|.....|..|.|..::|...|..||....:::.:.|..|.::.|: ..|:.|..|..
Zfish   395 IDKIVSHQFMCFVNLKTLKLVMSKISVFEDFAFIGLNKLKELNLHSNKISSIHRHTFSGLHELRV 459

  Fly   552 LNLSENHLVWFDYAFIPSNLKWLDIHGNYIE--ALGNYYKLQEEIRVTTLDASHNRITEIGAMSV 614
            |:|.||.::                   |||  :.|::..|...:              :|.::.
Zfish   460 LDLQENPII-------------------YIEPKSFGHFTNLSSLL--------------LGDLNF 491

  Fly   615 PNSIELLFIN-NNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGG 678
            |.::.|:.:: ::|.|.|.:|                 ||.:.::       |..:|: ...:|.
Zfish   492 PPNMSLIKLHLSDIFGGIPSN-----------------LSNVFIS-------SGLRPM-HLVIGS 531

  Fly   679 NPFECDCSMEWLQRINNLTTR-QHPHVVDLGNIECLMPHSRSAPLRPLASLSASDFVCKYESHCP 742
            |        ..|....||..: |:..|.|..::  |:....:..::....:..::|:.||     
Zfish   532 N--------TTLNNGLNLHIKGQYVIVEDCNSL--LLTSVVTLQIQAAYMICENEFIGKY----- 581

  Fly   743 PTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPEL 807
                                                       :|:.:..:...::.|  |:.:|
Zfish   582 -------------------------------------------VPSVVSLEFQSMFAD--NIGDL 601

  Fly   808 EVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLT--ALEGTEFRSLGLLRELY 870
            .|                          :.|||:|:.|.|||..||  ...|..|.:|..|.::.
Zfish   602 SV--------------------------INQLVHLKTLKLENIDLTNQPNTGIMFHNLTKLEKMI 640

  Fly   871 LHNNMLTHISNATFEPLVSL--------EVLRLDNNRLSSLPHLQYRHSLQGLTLGRNAWSCRCQ 927
            |.|..:..:..:..:.|.:|        |.:.:..|.:....||:|.| .|.|.|     .|.|.
Zfish   641 LMNCKIFFLDKSVTKDLKALTSLVLIPKEAVNIIQNFMEQPTHLKYLH-FQCLDL-----YCSCD 699

  Fly   928 QLRELAQFVSDNAMVV-----RDAHDIYCLDAGIKRELELIGNLANGPDCSDLLDASASNISSSQ 987
            . ..|..::.||..|.     ....|:.||.......|..|.....  :||..||....:.||  
Zfish   700 N-TWLVSWIRDNGKVEVVMSNPSMEDLRCLTDDEVDHLNFISYAKE--NCSIDLDFVFFSCSS-- 759

  Fly   988 DLAGGYRLPLLAAVLVLIFLVVVLIIVFV--------------FRESVRMWLFAHYGVRVCEPRF 1038
                         |.:.||:||||:..||              |||::||.....|         
Zfish   760 -------------VFLCIFIVVVLMYKFVGQYFKPFYHIASGWFREALRMKEKQQY--------- 802

  Fly  1039 EDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRPPF-RLCIQQRDLPPQASHLQLVEGAR----A 1098
                 .|||.:.:|.||..:|...:...||...||| |||:..||.  |..| .:||...    |
Zfish   803 -----RYDAFVSYSGKDEHWVIEELLPNLEQRGPPFLRLCLHSRDF--QLGH-DIVENITDSIYA 859

  Fly  1099 SRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSVSAEAEDVAELSPYLKSVPSN 1163
            ||:.:.:::||.|.:.|..:|.:.|.:.                :..|..|:..| .:|:::||.
Zfish   860 SRRTLCLVSRNYLNSNWCSVEMQLATYR----------------LQVEHRDILIL-VFLETIPSR 907

  Fly  1164 ---------RLLTCDRY------------FWEKL 1176
                     ||:....|            ||::|
Zfish   908 LLSSHHRLARLVKTRTYLDWPQEPEMHEAFWDRL 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 5/24 (21%)
leucine-rich repeat 92..115 CDD:275380 4/22 (18%)
LRR_8 115..181 CDD:290566 11/65 (17%)
leucine-rich repeat 116..146 CDD:275380 8/29 (28%)
leucine-rich repeat 147..170 CDD:275380 2/22 (9%)
leucine-rich repeat 171..201 CDD:275380 4/29 (14%)
LRR_RI 210..464 CDD:238064 53/284 (19%)
leucine-rich repeat 212..236 CDD:275380 4/23 (17%)
LRR_8 235..295 CDD:290566 14/65 (22%)
leucine-rich repeat 237..260 CDD:275380 5/25 (20%)
leucine-rich repeat 261..284 CDD:275380 6/25 (24%)
LRR_8 283..345 CDD:290566 13/69 (19%)
leucine-rich repeat 285..308 CDD:275380 6/22 (27%)
leucine-rich repeat 309..334 CDD:275380 3/24 (13%)
LRR_8 334..393 CDD:290566 14/75 (19%)
leucine-rich repeat 335..358 CDD:275380 9/36 (25%)
leucine-rich repeat 359..382 CDD:275380 2/25 (8%)
LRR_8 382..441 CDD:290566 10/66 (15%)
leucine-rich repeat 383..406 CDD:275380 5/22 (23%)
leucine-rich repeat 407..430 CDD:275380 2/24 (8%)
LRR_8 431..488 CDD:290566 16/70 (23%)
leucine-rich repeat 431..451 CDD:275380 5/25 (20%)
leucine-rich repeat 454..477 CDD:275380 6/30 (20%)
LRR_8 477..559 CDD:290566 25/82 (30%)
leucine-rich repeat 478..499 CDD:275380 7/20 (35%)
leucine-rich repeat 502..525 CDD:275380 7/22 (32%)
leucine-rich repeat 526..548 CDD:275380 5/22 (23%)
leucine-rich repeat 590..617 CDD:275380 3/26 (12%)
leucine-rich repeat 618..641 CDD:275380 5/23 (22%)
leucine-rich repeat 642..689 CDD:275380 6/46 (13%)
LRRCT 679..736 CDD:214507 9/57 (16%)
leucine-rich repeat 775..796 CDD:275380 1/20 (5%)
LRR_8 797..852 CDD:290566 12/54 (22%)
leucine-rich repeat 797..817 CDD:275380 4/19 (21%)
leucine-rich repeat 818..841 CDD:275380 2/22 (9%)
LRR_8 841..900 CDD:290566 17/68 (25%)
leucine-rich repeat 842..865 CDD:275380 10/24 (42%)
LRR_4 866..907 CDD:289563 8/48 (17%)
leucine-rich repeat 866..889 CDD:275380 4/22 (18%)
leucine-rich repeat 890..911 CDD:275380 6/28 (21%)
TIR 1045..1183 CDD:214587 42/158 (27%)
tlr20.4XP_009303038.2 leucine-rich repeat 99..121 CDD:275380 8/29 (28%)
leucine-rich repeat 148..171 CDD:275380 4/22 (18%)
leucine-rich repeat 172..197 CDD:275380 7/28 (25%)
leucine-rich repeat 229..265 CDD:275380 10/41 (24%)
leucine-rich repeat 385..408 CDD:275378 7/22 (32%)
LRR_8 408..467 CDD:316378 17/58 (29%)
leucine-rich repeat 409..432 CDD:275378 7/22 (32%)
PLN00113 <427..>516 CDD:331614 25/138 (18%)
leucine-rich repeat 433..456 CDD:275378 5/22 (23%)
leucine-rich repeat 457..480 CDD:275378 9/41 (22%)
leucine-rich repeat 541..584 CDD:275380 8/92 (9%)
leucine-rich repeat 585..609 CDD:275380 6/51 (12%)
leucine-rich repeat 610..635 CDD:275380 10/24 (42%)
leucine-rich repeat 636..659 CDD:275380 4/22 (18%)
TIR 803..941 CDD:214587 41/157 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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