DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and SV2A

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001315603.1 Gene:SV2A / 9900 HGNCID:20566 Length:742 Species:Homo sapiens


Alignment Length:562 Identity:118/562 - (20%)
Similarity:175/562 - (31%) Gaps:197/562 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|.....:...||.||::.|:.|:|..|||.|||...|....:..:..........|..:...|
Human   198 CLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCR 262

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
Human   263 LLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGS- 326

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVI-YIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---K 270
                 ||....||.|.. :..|..||.| .:...|||||:....||.|::..:|:::...|   |
Human   327 -----AYQFHSWRVFVL-VCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAK 385

  Fly   271 APTE---------TIRP-----EIEAAYGALAARQPVKK--------GTVVDLFRTPYMRIKTIF 313
            ...|         ||..     ||::..|....|..|:.        |..:..|...|.|| |:.
Human   386 GHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRI-TLM 449

  Fly   314 MANNWLVVCMVYYG-------------TAQYVSAL-----------------------GG----- 337
            |...|..:...|||             ...|.|..                       ||     
Human   450 MMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFND 514

  Fly   338 ----------------------------NIFISNAI----------------------------- 345
                                        |.|..|..                             
Human   515 KFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHN 579

  Fly   346 -------AAGVG-----------------IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLAC 386
                   ..|.|                 :||..:.||:...:||.:.|..|:..|.:....|:.
Human   580 KEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSF 644

  Fly   387 LSTQAEAVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSIVAP 445
            .::::..:.:.|    || |.||...|.. :...||:|:..|::..|    ||.:...:|..:..
Human   645 GNSESAMIALLC----LFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFT 705

  Fly   446 LIVDLAAYGLWVAPLIFGIFSILAMLGT---IFLPETRGTPL 484
            ..|.:..    .||::|.  |....||:   :.||||||..|
Human   706 SFVGITK----AAPILFA--SAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 118/562 (21%)
MFS 87..477 CDD:119392 111/553 (20%)
SV2ANP_001315603.1 synapt_SV2 1..742 CDD:130366 118/562 (21%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..144
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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