DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and mdfA

DIOPT Version :10

Sequence 1:NP_611451.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_415363.1 Gene:mdfA / 945448 ECOCYCID:G6440 Length:410 Species:Escherichia coli


Alignment Length:414 Identity:69/414 - (16%)
Similarity:139/414 - (33%) Gaps:137/414 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAVATAG 175
            |.:..:.|.:|...|.|..:||.||||..|......::|.|.:.::.....:.|.|||..::...
E. coli    57 SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCF 121

  Fly   176 TMTTSFVLLME------------------IVGPKKREMV--AILYQIPFN---IGHASLALFAYF 217
            .....:..:.|                  ::.|....:|  |.::.:|:.   :..|:||..::|
E. coli   122 IGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFF 186

  Fly   218 ----------------------IREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIK 260
                                  .|:::                  ||.::.|  |..|.|.....
E. coli   187 GLQRAMPETATRIGEKLSLKELGRDYK------------------LVLKNGR--FVAGALALGFV 231

  Fly   261 ILEKIAKCNKAPTETIRPEIEAAY----------GALAARQPVKKGTVVDLFRTPYMRIKTIFMA 315
            .|..:|...::|...|..|..::|          |||.|      |.::....|....::::.:.
E. coli   232 SLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIA------GNLLLARLTSRRTVRSLIIM 290

  Fly   316 NNWLVVCMVYYGTAQYVSALGGNIFISNAI---AAGVGIPGTCLCALMTKYLGRKKTLL---LSN 374
            ..|.::..:....|..|.:....::::..:   |.|:|:....|..|         ||.   :|.
E. coli   291 GGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRL---------TLFASDMSK 346

  Fly   375 G--CSALGLILLACLSTQAEAVRVTCATIGLFGASITFPNVYLYGGELFPTVVRSSGVGLCSMVG 437
            |  .:|:|::.:...:...|..:                :.:|.||.           ||.::..
E. coli   347 GTVSAAMGMLQMLIFTVGIEISK----------------HAWLNGGN-----------GLFNLFN 384

  Fly   438 RIGSIVAPLIVDLAAYGLWVAPLI 461
            .:..|            ||::.::
E. coli   385 LVNGI------------LWLSLMV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_611451.1 MFS_SLC22 82..477 CDD:340875 69/414 (17%)
mdfANP_415363.1 PRK15402 7..410 CDD:185300 69/414 (17%)

Return to query results.
Submit another query.