DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and Sv2c

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_083486.1 Gene:Sv2c / 75209 MGIID:1922459 Length:727 Species:Mus musculus


Alignment Length:638 Identity:121/638 - (18%)
Similarity:198/638 - (31%) Gaps:237/638 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IISQIGDFR-RYQLFFFFIVLLCKFGTGWHTLGHIFLAAPTPLSCKTENVTDPCSDECSETEFDT 87
            ||.:.|..| ::.|||...:.|...|.....:|.:..:|.|.|                      
Mouse   141 IIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAETDL---------------------- 183

  Fly    88 SVFQSTIITEWNLTCESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLI 152
                          |.....:....|||.||::.|:..:|..||:.||:.:.|.|   ..:.|..
Mouse   184 --------------CIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC---MSVNGFF 231

  Fly   153 VCVSPY---YWFYCLFRFLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ--- 201
            ..:|.:   |.|:.:.|.|......|.:.|.|....|::..:||.          |:..:|.   
Mouse   232 AFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAM 296

  Fly   202 ----IP-----FNIGHASLALFAYFIREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKLDK 257
                ||     |::|.      ||....||.|.....:..:..|:.:..:|||||:|...||.|:
Mouse   297 AWAIIPHYGWSFSMGS------AYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDE 355

  Fly   258 SIKIL--------------EKIAKCNKAPT-----ETIRPEIEAAYGALAARQPVKKG------- 296
            :..||              ||:...||..|     |.|  |||:..|....|..|:..       
Mouse   356 AWMILKLIHDTNMRARGQPEKVFTVNKIKTPKQIDELI--EIESDTGTWYRRCFVRIRTELYGIW 418

  Fly   297 -TVVDLFRTPYMRIKTIFMANNWLVVCMVYYG--------------------------------- 327
             |.:..|..| :|..||.:...|..:...|||                                 
Mouse   419 LTFMRCFNYP-VRENTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNVQKDKYANFS 482

  Fly   328 ---------------------------------------------------TAQYVSALGGN--- 338
                                                               ...::..|..|   
Mouse   483 INFTMENQIHTGMEYENGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFKNCTFIDTLFDNTDF 547

  Fly   339 ----------------------------------IFISNAIAAGVGIPGTCLCALMTKYLGRKKT 369
                                              |:..|.:.....:||..:.||:...:||...
Mouse   548 EPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGRLTM 612

  Fly   370 LLLSNGCSALGLILLACLSTQAEAVRVTCATIGLFGASITFPNVYLYGGELFPTVVRSSGVG--- 431
            |..|...|.:....|...::::..:.:.|...||..::....:|...  ||:||..|::|.|   
Mouse   613 LGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVVTV--ELYPTDRRATGFGFLN 675

  Fly   432 -LCSMVGRIGSIVAPLIVDLAAYGLWVAPLIFGIFSILAMLGTIF---LPETR 480
             ||.....:|:::...:|.:..    ..|::  :.|.:.:.|.:.   ||:||
Mouse   676 ALCKAAAVLGNLIFGSLVSITK----AIPIL--LASTVLVCGGLVGLRLPDTR 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 108/576 (19%)
MFS 87..477 CDD:119392 104/569 (18%)
Sv2cNP_083486.1 synapt_SV2 1..727 CDD:130366 121/638 (19%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..128
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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